View Redoxidase 6526

Entry information : CcinGPx

Entry ID	6526
Creation	2009-01-24 (Christophe Dunand)
Last sequence changes	2009-01-24 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2010-08-13 (Marie Brette (Scipio))

Peroxidase information: CcinGPx

Name

CcinGPx

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Psathyrellaceae Coprinopsis

Organism

Coprinopsis cinerea (Coprinus cinereus) [TaxId: 5346 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CcinGPx start..stop	S start..stop
MfiaGPx01	249	2.3e-86	5..174	2..167
PstrGPx01	251	1.06e-85	2..168	92..254
HsubGPx01	245	4.15e-84	2..168	48..210
PtinGPx01	244	1.77e-83	1..170	59..225

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6526' 'join(2274023..2274124,2274222..2274344,2274410..2274583,2274643..2274768)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2274023..2274124	100	N° 2	2274222..2274344	121	N° 3	2274410..2274583	172	N° 4	2274643..2274768	124
join(2274023..2274124,2274222..2274344,2274410..2274583,2274643..2274768)

Literature and cross-references CcinGPx

Protein ref.	UniProtKB: A8NUA0 [Incorrect splicing]
DNA ref.	JGI genome: Chr_4 (2274023..2274765)

Protein sequence: CcinGPx

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	174
PWM (Da):	19331.73	Transmb domain:	o31-53i
PI (pH):	5.28

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSTESSSGFYSLKAELPNGQTYDFEQLRGKVVLIACSHFNGVLLLGVTFLPSGLQQLYEKYKDRGFTILGFPCNQFGGQEPADDAGIQEFCTVNHGVTFPLMKKSEVNGDNTNEVYQWLK
SKKAGFLGLTRIKWNFEKFLVDKEGNVVNRWASTTSPSSIASEIEKLLTEEPRL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (3 introns) and no EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTACTGAATCATCTTCTGGCTTTTACTCTCTGAAGGCTGAACTGCCCAATGGACAAACCTACGACTTTGAACAACTTCGTGGCAAGGTTGTGTTGATTTTGTGAATACTGCATCCA
AATGGTTTAGTCCCACCTTTCAGTTAAAATGTGTAGGATTTACTGACCGATTTTAAAGTGGATTTACTCCTCAATACAAAGGCGTGTTCTCATTTTAATGGCGTTCTTTTGCTTGGAGTG
ACATTTTTGCCCTCAGGTTTGCAACAACTGTACGAGAAGTACAAGGATAGAGGATTCACTATTCTCGGCTTCCCTTGCAACCAGAGGTTCGTCCTTTGCAATCGCGTTAGGGAGGGGGTC
TGATCGGCCTCCCATCCTTTCCCCCCTCTAGTTCGGTGGGCAAGAACCTGCGGACGATGCTGGTATTCAAGAATTCTGCACGGTGAACCATGGCGTCACTTTCCCCCTTATGAAGAAATC
CGAGGTGAACGGAGACAACACCAACGAAGTTTATCAATGGCTAAAGAGCAAGAAGGCTGGTTTCTTGGGCCTCACGAGAATCAAGAGGTGTGTGCTGTGCCGCCTTACCAGTTCTTTCTC
CTAAAAGCTCAATGGCGGTTTGGTAGTGGAACTTTGAAAAGTTTTTGGTCGACAAGGAGGGAAATGTTGTGAATCGCTGGGCCTCAACCACATCCCCTTCGTCTATCGCCTCTGAGATTG
AGAAGCTGTTGACCGAGGAACCGAGATTGTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTACTGAATCATCTTCTGGCTTTTACTCTCTGAAGGCTGAACTGCCCAATGGACAAACCTACGACTTTGAACAACTTCGTGGCAAGGTTGTGTTGATTGCGTGTTCTCATTTTAAT
GGCGTTCTTTTGCTTGGAGTGACATTTTTGCCCTCAGGTTTGCAACAACTGTACGAGAAGTACAAGGATAGAGGATTCACTATTCTCGGCTTCCCTTGCAACCAGTTCGGTGGGCAAGAA
CCTGCGGACGATGCTGGTATTCAAGAATTCTGCACGGTGAACCATGGCGTCACTTTCCCCCTTATGAAGAAATCCGAGGTGAACGGAGACAACACCAACGAAGTTTATCAATGGCTAAAG
AGCAAGAAGGCTGGTTTCTTGGGCCTCACGAGAATCAAGTGGAACTTTGAAAAGTTTTTGGTCGACAAGGAGGGAAATGTTGTGAATCGCTGGGCCTCAACCACATCCCCTTCGTCTATC
GCCTCTGAGATTGAGAAGCTGTTGACCGAGGAACCGAGATTGTAG

Retrieve as FASTA