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Entry information : CcinKat03
Entry ID 6531
Creation 2009-01-26 (Christophe Dunand)
Last sequence changes 2009-01-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-08-13 (Marie Brette (Scipio))
Peroxidase information: CcinKat03
Name CcinKat03
Class Catalase    [Orthogroup: Kat002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Psathyrellaceae Coprinopsis
Organism Coprinopsis cinerea (Coprinus cinereus)    [TaxId: 5346 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcinKat03
start..stop		 S start..stop
CcinKat04 1067 0 1..576 1..578
PnoKat01 822 0 26..561 3..532
CtheKat3 818 0 1..561 14..569
SAcoKat02 814 0 2..568 10..574
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2616225..2616513 287 N° 2 2616577..2616650 72 N° 3 2616706..2616867 160 N° 4 2616920..2617134 213
N° 5 2617189..2618179 989  
join(2616225..2616513,2616577..2616650,2616706..2616867,2616920..2617134,2617189 ..2618179)


exon

Literature and cross-references CcinKat03
Literature Birren et al., The Broad Institute Genome Sequencing Platform. Annotation of the Coprinopsis cinerea genome.
DNA ref. JGI genome:   Chr_7 (2616225..2618176)
Protein sequence: CcinKat03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   576
PWM (Da):   %s   65233  
PI (pH):   %s   7.21
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQAAKEAMGAVGVDPRPMQRTSTFMNANDGPAEIIAKVSGVVSAGKRKDDAPYFTNNEGIPWPDPTHSKNVGGLPLISDTFLLQKQQTFNRSKTLERMVHPCGSGAFGYFECTQDMSELTAGLYSKAGKETPIFLRFSTVTFGREFPDSGRNPRGFAIKHYTEDGNYDVVGLNWPIFFCRDPIQGPDVIRSQQRNPQNFLLNYDSLFDFLAHTPEANHAGMMFFSDHGTPNGWRNQHGYG
CHTFKWVNAEGKFVYVKYHYLAEHGQKQFTWPEAVRMSGEDPDYAKRDLWAAIERGETPTWTMKVQIMRPEEADPNKLGFDPFDVTKVWPRSRFPMHEVGRLVLNKNPENYHRDVEQSAF
SPGSMVPGIEDSPDALLQFRMFFYRDAQYHRLGVNLHQIPVNCPFMAKSYSSINFDGPLRSDANTGMNPHYVPNSFVNKFRPDTAEAPYQVSDNVVSRQSHFWHEGKDSDYEQARDLYFK
VMTPEARSHLHTNTAVLLKQVTYKIIVLNYLAQQYRIAPEYAKAIYDLVPEPGFDFSEVEAKAKGAAVMTKEAKFAPTKEFHRSVGIPATGLAYN

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGCCGCCAAAGAAGCTATGGGCGCCGTTGGCGTCGACCCGCGCCCCATGCAGCGCACCTCGACGTTTATGAACGCCAACGACGGCCCTGCAGAGATCATCGCCAAGGTCTCTGGC
GTTGTGTCTGCTGGGAAACGCAAGGATGATGCGCCGTACTTTACCAACAACGAGGGTATCCCATGGCCGGACCCCACCCATAGCAAGAATGTGGGTGGTCTCCCGCTCATTAGCGACACC
TTCCTCTTGCAGAAGCAGCAGACCTTCAACCGAAGCAAGACTCTTGAACACGTACGTTTAGCTTTATGACTTTTTTCGTGGCAGTATGGAAACTGATTCCTTGCTGCTTGTCAGGCATGG
TCCATCCCTGCGGTTCCGGTGCTTTTGGATATTTCGAGTGTACTCAAGACATGAGCGAACTCACCAAGAGGTTAGCGTCATCTCGCCTTGATGATACCCGTCGTTGCGCTGATCCCATGA
TTTAGGCAGGTCTCTACAGCAAGGCGGGCAAGGAGACTCCCATCTTCCTTCGCTTCTCGACCGTCACCTTTGGTCGCGAGTTCCCAGACTCTGGCAGGAACCCTCGAGGATTCGCTATCA
AGCACTACACTGAGGATGGAAACTATGACGTCGTCGGTCTCAACTGGGGGTACGTCCTACCTGACATTGGGGGAAGATTCGTTACTTAGCCAGCCTTCTAGCCCATTTTCTTCTGCCGTG
ACCCCATCCAAGGCCCCGATGTCATTCGCTCCCAACAACGAAACCCACAGAACTTCCTGTTGAACTACGACAGTCTCTTCGACTTCCTTGCTCATACACCCGAGGCGAACCATGCCGGTA
TGATGTTCTTCAGCGACCATGGCACTCCCAACGGTTGGAGGAACCAGCACGGCTACGGTTGCCACACTTTCAAGTGTGGTGAGTGAAGTCCCTCTGTGCATGCTGATACATGCTGAGGAG
GGCATTCCGCAGGGTCAACGCAGAGGGCAAATTCGTCTACGTCAAATACCACTACCTCGCCGAGCACGGCCAGAAGCAGTTCACCTGGCCCGAAGCTGTCCGAATGAGCGGCGAGGACCC
CGACTACGCGAAACGCGACCTCTGGGCTGCCATCGAGCGTGGTGAAACCCCAACCTGGACGATGAAGGTCCAAATCATGCGTCCCGAGGAGGCCGACCCCAACAAGCTCGGCTTTGACCC
CTTCGACGTCACCAAGGTCTGGCCGCGCAGCCGCTTCCCCATGCACGAAGTCGGCCGCCTCGTCCTCAACAAGAACCCAGAGAACTACCACCGCGACGTCGAGCAATCCGCGTTCTCTCC
CGGTTCCATGGTACCTGGAATTGAGGACTCGCCTGACGCTCTCCTCCAGTTCCGCATGTTCTTCTACCGCGACGCGCAGTACCATCGCCTCGGTGTCAACCTCCACCAAATCCCCGTCAA
CTGCCCGTTCATGGCCAAGAGCTACTCCTCCATCAACTTTGACGGTCCTCTCAGGAGTGACGCCAACACTGGCATGAACCCCCACTACGTCCCCAACTCCTTCGTCAACAAGTTCCGCCC
AGACACTGCCGAGGCGCCGTACCAAGTCTCCGACAACGTTGTCTCGCGCCAGTCGCACTTTTGGCATGAAGGCAAGGACTCGGATTACGAGCAGGCGCGCGATTTGTACTTCAAGGTTAT
GACACCTGAAGCTAGGAGCCACCTCCACACCAACACGGCAGTCCTCTTGAAGCAGGTCACCTACAAGATAATCGTGCTCAACTATTTGGCGCAGCAGTATCGTATTGCGCCCGAGTATGC
GAAGGCGATTTATGATCTTGTTCCGGAGCCTGGATTTGACTTTAGTGAGGTCGAGGCGAAGGCGAAGGGCGCTGCGGTGATGACCAAGGAGGCCAAGTTTGCACCCACGAAGGAGTTCCA
TAGGTCGGTTGGTATCCCTGCTACTGGGTTGGCTTATAACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGCCGCCAAAGAAGCTATGGGCGCCGTTGGCGTCGACCCGCGCCCCATGCAGCGCACCTCGACGTTTATGAACGCCAACGACGGCCCTGCAGAGATCATCGCCAAGGTCTCTGGC
GTTGTGTCTGCTGGGAAACGCAAGGATGATGCGCCGTACTTTACCAACAACGAGGGTATCCCATGGCCGGACCCCACCCATAGCAAGAATGTGGGTGGTCTCCCGCTCATTAGCGACACC
TTCCTCTTGCAGAAGCAGCAGACCTTCAACCGAAGCAAGACTCTTGAACGCATGGTCCATCCCTGCGGTTCCGGTGCTTTTGGATATTTCGAGTGTACTCAAGACATGAGCGAACTCACC
AAGGCAGGTCTCTACAGCAAGGCGGGCAAGGAGACTCCCATCTTCCTTCGCTTCTCGACCGTCACCTTTGGTCGCGAGTTCCCAGACTCTGGCAGGAACCCTCGAGGATTCGCTATCAAG
CACTACACTGAGGATGGAAACTATGACGTCGTCGGTCTCAACTGGCCCATTTTCTTCTGCCGTGACCCCATCCAAGGCCCCGATGTCATTCGCTCCCAACAACGAAACCCACAGAACTTC
CTGTTGAACTACGACAGTCTCTTCGACTTCCTTGCTCATACACCCGAGGCGAACCATGCCGGTATGATGTTCTTCAGCGACCATGGCACTCCCAACGGTTGGAGGAACCAGCACGGCTAC
GGTTGCCACACTTTCAAGTGGGTCAACGCAGAGGGCAAATTCGTCTACGTCAAATACCACTACCTCGCCGAGCACGGCCAGAAGCAGTTCACCTGGCCCGAAGCTGTCCGAATGAGCGGC
GAGGACCCCGACTACGCGAAACGCGACCTCTGGGCTGCCATCGAGCGTGGTGAAACCCCAACCTGGACGATGAAGGTCCAAATCATGCGTCCCGAGGAGGCCGACCCCAACAAGCTCGGC
TTTGACCCCTTCGACGTCACCAAGGTCTGGCCGCGCAGCCGCTTCCCCATGCACGAAGTCGGCCGCCTCGTCCTCAACAAGAACCCAGAGAACTACCACCGCGACGTCGAGCAATCCGCG
TTCTCTCCCGGTTCCATGGTACCTGGAATTGAGGACTCGCCTGACGCTCTCCTCCAGTTCCGCATGTTCTTCTACCGCGACGCGCAGTACCATCGCCTCGGTGTCAACCTCCACCAAATC
CCCGTCAACTGCCCGTTCATGGCCAAGAGCTACTCCTCCATCAACTTTGACGGTCCTCTCAGGAGTGACGCCAACACTGGCATGAACCCCCACTACGTCCCCAACTCCTTCGTCAACAAG
TTCCGCCCAGACACTGCCGAGGCGCCGTACCAAGTCTCCGACAACGTTGTCTCGCGCCAGTCGCACTTTTGGCATGAAGGCAAGGACTCGGATTACGAGCAGGCGCGCGATTTGTACTTC
AAGGTTATGACACCTGAAGCTAGGAGCCACCTCCACACCAACACGGCAGTCCTCTTGAAGCAGGTCACCTACAAGATAATCGTGCTCAACTATTTGGCGCAGCAGTATCGTATTGCGCCC
GAGTATGCGAAGGCGATTTATGATCTTGTTCCGGAGCCTGGATTTGACTTTAGTGAGGTCGAGGCGAAGGCGAAGGGCGCTGCGGTGATGACCAAGGAGGCCAAGTTTGCACCCACGAAG
GAGTTCCATAGGTCGGTTGGTATCCCTGCTACTGGGTTGGCTTATAACTAG

Retrieve as FASTA