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Entry information : BoPrx54-1Ca_other
Entry ID 6604
Creation 2009-02-20 (Christophe Dunand)
Last sequence changes 2009-02-20 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx54-1Ca_other
Name BoPrx54-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx006]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx54-1Ca_other
start..stop		 S start..stop
BnPrx54-1_other 559 0 2..281 79..358
BrPrx54-1Aa_other 549 0 2..281 79..358
TsPrx54 485 1.46e-174 2..281 80..361
BnPrx54-3_other 478 1.42e-172 2..247 79..324
Literature and cross-references BoPrx54-1Ca_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R., Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Genome Res. 15 (4): 487-495 2005

DNA ref. GenBank:   BZ481539.1 [Fragment]
Cluster/Prediction ref. UniGene:   Bol.14803 [3' end]
Protein sequence: BoPrx54-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   281
PWM (Da):   %s   29085.4 Transmb domain:   %s   i13-35o
PI (pH):   %s   4.21
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KGCDGSLLLD DSATIQSEKN AVPNANSTRG FNVVDDIKTA LENACPGIVS CSDILALASE ASVSLAGGPT WTVLLGRRDG LTANLSGANT GLPSPFEGIT NITAKFTAVG LNTTDVVVLS  GAHTFGRAAC ATFNNRLFNF NGTGSPDPTL NSTLLSSLQQ LCPQNGNASV VTNLDLSTPD AFDNNYFTNL QSNNGLLQSD QELLSDTGSP TIPIVTSFAS NQTQFFEAFV LSMIKMGNIS 
PLTGSSGEIR QDCKVVNGQS TTQAIELRSG SAEKAVNLAE M 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs.