View Redoxidase 6618

Entry information : UmAhpD

Entry ID	6618
Creation	2009-03-06 (Christophe Dunand)
Last sequence changes	2009-03-06 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-03 (Catherine Mathe (Scipio))

Peroxidase information: UmAhpD

Name

UmAhpD

Class

Alkylhydroperoxidase D [Orthogroup: N/D] N/D

Taxonomy

Eukaryota Fungi Basidiomycota Ustilaginomycetes Ustilaginaceae Ustilago

Organism

Ustilago maydis [TaxId: 5270 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	UmAhpD start..stop	S start..stop
BdCMDn	125	6.4e-38	36..152	7..123
SavHCMDn02	118	2.89e-32	36..152	309..425
AauCMDn	110	6.08e-32	35..159	23..147
ScoHCMDn02	117	7.34e-32	36..152	327..443

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	12558..13070	511
complement(join(12558..13070))

Literature and cross-references UmAhpD

DNA ref.	JGI genome: contig_1_195 (13070..12558)
EST ref.	GenBank: EH018203.1

Protein sequence: UmAhpD

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	170
PWM (Da):	18158.03
PI (pH):	6.11

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAAPKTDQDS GAAPAPAPAP AQARSADWVE LHRTLHSTGD EIRRQVVGEE YVNRSLANAS EFTMPMQQLA TEYAWGGIWS RPGLARRDRS ILNIGMLAAL GKSTELATHV RGALNNGVTE
TEVQECLLQV ATYVGMPAGM EAFRAADKAV QEWKSTNANA HVAASKPEQK

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 18, no intron) and 5 ESTs.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCCGCCC CCAAAACCGA TCAAGATAGT GGAGCTGCAC CTGCACCTGC ACCTGCACCT GCACAGGCCC GCTCGGCTGA CTGGGTTGAG CTGCACCGAA CGTTGCACTC GACTGGCGAT GAGATTCGAC GTCAAGTGGT GGGAGAAGAG TATGTCAACC GCAGCTTGGC CAACGCGAGC GAGTTCACCA TGCCCATGCA GCAATTAGCA ACCGAATATG CGTGGGGCGG TATATGGTCT CGTCCCGGAT TGGCACGACG TGATCGCAGT ATCCTCAACA TTGGCATGCT CGCCGCGCTG GGAAAGTCGA CTGAACTGGC CACCCACGTT CGAGGCGCAC TTAACAATGG CGTTACCGAG ACCGAGGTTC AAGAATGCTT GCTTCAGGTG GCGACGTATG TGGGTATGCC AGCGGGTATG GAGGCGTTCC GAGCGGCAGA CAAGGCGGTG CAAGAATGGA AGTCTACCAA CGCCAACGCT
CATGTCGCTG CTTCAAAGCC CGAACAGAAG TAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA