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Entry information : LbiNOx01
Entry ID 6661
Creation 2009-04-02 (Christophe Dunand)
Last sequence changes 2009-04-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: LbiNOx01
Name LbiNOx01
Class Ancestral NADPH oxidase    [Orthogroup: NOx002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Laccaria
Organism Laccaria bicolor    [TaxId: 29883 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LbiNOx01
start..stop		 S start..stop
CcinNOx01 1025 0 1..559 1..558
PcarNOx01 977 0 1..559 1..559
PcNOx01 975 0 1..559 1..559
AbNOx01_bisporus 972 0 1..559 1..557
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6661' 'complement(join(4486053..4486064,4486114..4486206,4486263..4486492,4486549..4486713,4486762..4487068,4487126..4487226,4487279..4487668,4487718..4487988,4488042..4488152))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4488042..4488152 109 N° 2 4487718..4487988 269 N° 3 4487279..4487668 388 N° 4 4487126..4487226 99
N° 5 4486762..4487068 305 N° 6 4486549..4486713 163 N° 7 4486263..4486492 228 N° 8 4486114..4486206 91
N° 9 4486053..4486064 10  
complement(join(4486053..4486064,4486114..4486206,4486263..4486492,4486549..4486 713,4486762..4487068,4487126..4487226,4487279..4487668,4487718..4487988,4488042. .4488152))


exon

Literature and cross-references LbiNOx01
DNA ref. JGI genome:   LG_1 (4488152..4486053)
EST ref. GenBank:   EX783742.1 [3' end]  EX791261.1 [Fragment]
Protein sequence: LbiNOx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   559
PWM (Da):   %s   63481.56 Transmb domain:   %s   i16-38o53-75i102-124o139-161i174-196o216-238i380-402o
PI (pH):   %s   9.72
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGESWFRREFMVPRRLAFNVLFYGAHLSLFIYGWYSQATNQRLAGLNSLKYSVWTSRGAGLVLAFDGGLILLPMLRNIIRIIRPKLTWAFPADENIWFHRQVAYSLAFWAMVHTTAHYVN
FINVERTQIRKQTALQIHYTQPGGITGHFMLLIMVLMYSTAHQKIRQQCFEAFWYTHHLAFFFMLGLYTHATGCFVRDTVDPDYIPTFPFYSTEHCLGYLSWRFIIWPGIIYFGERVWRE
IRARRATRLSKVLVHPSGAMELRIIKPSFKYTAGQWLFIQIPELSRFQWHFTITSAPEDPYVSIHIRQVGDFTRGLGDRLGVGPSVVASMTQAAMKGAEKDKMSGMSRGDYVELDPAGSS
IALPSVRIDGPYGAPAEDVFGAEVAILIGAGIGVTPFASILKHIWYRQKKGKLGSLRRVEFFWVCRDAPSFGWFQSLLQEVEAAQADPNFLRINVYLTQKISEDMLWNIAVNDAGAEYDP
LTLLRSRTMFGRPDWMTIFGQMKQAIEGGQYLPGSTSQLKTKVTYFCGPGALAKAIKDATVSHTNSNVEFTFAKEHF*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo ?, 7 introns) and 3 ESTs. Strain="S238N-H82".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGAAAGCTGGTTCCGTAGGGAATTTATGGTCCCACGCCGACTTGCGTTCAACGTCCTCTTTTATGGCGCTCATCTGTCGCTCTTCATATATGGATGGTATAGTCAGGTGTGTCGT
CGTGCTCCTGCATGCTATACAAGTGGCACTCATCTTCTTTACAGGCGCAACAAACCAGAGATTGGCTGGTCTTAACTCACTGAAATACTCTGTTTGGACATCTCGCGGCGCTGGCCTTGT
TCTTGCATTCGATGGCGGCCTCATTCTTCTTCCAATGCTTCGCAACATTATTCGAATTATTCGTCCCAAGTTAACGTGGGCATTTCCCGCCGACGAAAACATCTGGTTCCATCGTCAAGT
CGCGTATTCCCTGGCTTTCTGGGCTATGGTTCATACTACCGCTCATTATGTCAATTTCATCAACGTTGAACGTACTCGTAGGGTCTTCCCCGTTTCTTATTTACTTACAGCTTAACCCCT
ATGCAGAGAGATTCGCAAGCAAACCGCACTCCAGATCCATTACACCCAGCCGGGTGGTATTACTGGGCACTTTATGCTTCTGATCATGGTTCTCATGTATTCGACTGCACATCAAAAGAT
CCGTCAGCAATGCTTTGAAGCTTTCTGGTATACCCATCACCTTGCATTTTTCTTTATGCTTGGCCTATACACGCACGCGACAGGATGCTTCGTTCGCGACACCGTCGACCCAGATTACAT
CCCAACTTTCCCATTCTATAGCACAGAACATTGTCTTGGATACCTTAGTTGGCGGTTCATCATATGGCCTGGTATTATCTATTTTGGAGAGAGGGTCTGGAGAGAGATACGTGCACGGCG
AGCGACACGCTTATCTAAAGTTCTTGTTCATCCTAGCGGTGCGTTTTTCATTTGATGCTAGGGATGAAGTCTTAGCGTCTTTTGTATCAGGCGCGCCATGGAATTGCGTATCATCAAACC
CAGCTTCAAATATACAGCTGGTCAATGGCTTTTCATTCAGATCCCAGAACTGTCCCGTTTCCAGTGGCATCCGGTACGTAGCGATTTGCACATAATTTCCGTTGAATTGGCGTTTGACAA
AATGCCGCAGTTTTTACTATCACATCAGCGCCTGAAGATCCCTACGTTTCTATCCATATCCGCCAAGTTGGTGATTTCACTCGAGGTCTGGGAGACCGCCTGGGTGTTGGACCGTCCGTT
GTTGCTTCAATGACTCAGGCTGCCATGAAAGGAGCTGAAAAGGATAAAATGTCAGGCATGTCTCGAGGTGACTACGTGGAATTGGATCCAGCTGGCTCTTCAATTGCTCTTCCATCCGTT
CGCATTGATGGTCCCTATGGTGCTCCAGCGGAGGACGTGTTTGGGGCTGAAGTAGCTATTTTAATTGGTGCCGGTATCGGTGAGTGTTTGAAGCGAGTTCAATGGATTCTGATTTATGTC
GATGAAGGTGTGTCACCCCCTTCGCCTCCATCCTTAAGCATATTTGGTACAGGCAGAAGAAGGGCAAACTGGGTTCCCTGCGTCGGGTTGAATTCTTCTGGGTTTGTCGAGATGCACCTT
CGTTTGGTTGGTTCCAGTCCTTGCTTCAGGAAGTCGAGGCTGCCCAAGCTGATCGTGAGTTGCACGTTTTGGCTGGTCTCCAAATTTTATGTTTTTTTTGTTCTCGTCAGCCCCAATTTT
TTGCGTATCAACGTGTACCTGACGCAGAAGATCAGCGAAGACATGCTTTGGAACATCGCTGTCAATGACGCTGGTGCTGAATATGATCCCCTCACCCTCTTACGCTCGCGCACGATGTTT
GGACGCCCCGATTGGATGACTATCTTTGGACAAATGAAGCAAGCAATTGAGGGAGGACAATATCTTCCTGGAAGCACGTCCCAGTTAAAAACCAAAGTTGCTGTACGAGGCCATCATCCG
AAGTTGATCGCTGACACTCAACCCCCTACCCTATATAGACACATATTTCTGCGGACCTGGTGCGCTTGCTAAGGCGATCAAGGATGCTACTGTCTCCCACACCAACTCCAATGTTGAGTT
CACTTTTGCAAAGGTAAGTTGTGTCCCCCAATATTTGCTTATTGACTTGACCTTTTCTCTAGGAGAACATTTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGAAAGCTGGTTCCGTAGGGAATTTATGGTCCCACGCCGACTTGCGTTCAACGTCCTCTTTTATGGCGCTCATCTGTCGCTCTTCATATATGGATGGTATAGTCAGGCAACAAAC
CAGAGATTGGCTGGTCTTAACTCACTGAAATACTCTGTTTGGACATCTCGCGGCGCTGGCCTTGTTCTTGCATTCGATGGCGGCCTCATTCTTCTTCCAATGCTTCGCAACATTATTCGA
ATTATTCGTCCCAAGTTAACGTGGGCATTTCCCGCCGACGAAAACATCTGGTTCCATCGTCAAGTCGCGTATTCCCTGGCTTTCTGGGCTATGGTTCATACTACCGCTCATTATGTCAAT
TTCATCAACGTTGAACGTACTCAGATTCGCAAGCAAACCGCACTCCAGATCCATTACACCCAGCCGGGTGGTATTACTGGGCACTTTATGCTTCTGATCATGGTTCTCATGTATTCGACT
GCACATCAAAAGATCCGTCAGCAATGCTTTGAAGCTTTCTGGTATACCCATCACCTTGCATTTTTCTTTATGCTTGGCCTATACACGCACGCGACAGGATGCTTCGTTCGCGACACCGTC
GACCCAGATTACATCCCAACTTTCCCATTCTATAGCACAGAACATTGTCTTGGATACCTTAGTTGGCGGTTCATCATATGGCCTGGTATTATCTATTTTGGAGAGAGGGTCTGGAGAGAG
ATACGTGCACGGCGAGCGACACGCTTATCTAAAGTTCTTGTTCATCCTAGCGGCGCCATGGAATTGCGTATCATCAAACCCAGCTTCAAATATACAGCTGGTCAATGGCTTTTCATTCAG
ATCCCAGAACTGTCCCGTTTCCAGTGGCATCCGTTTACTATCACATCAGCGCCTGAAGATCCCTACGTTTCTATCCATATCCGCCAAGTTGGTGATTTCACTCGAGGTCTGGGAGACCGC
CTGGGTGTTGGACCGTCCGTTGTTGCTTCAATGACTCAGGCTGCCATGAAAGGAGCTGAAAAGGATAAAATGTCAGGCATGTCTCGAGGTGACTACGTGGAATTGGATCCAGCTGGCTCT
TCAATTGCTCTTCCATCCGTTCGCATTGATGGTCCCTATGGTGCTCCAGCGGAGGACGTGTTTGGGGCTGAAGTAGCTATTTTAATTGGTGCCGGTATCGGTGTCACCCCCTTCGCCTCC
ATCCTTAAGCATATTTGGTACAGGCAGAAGAAGGGCAAACTGGGTTCCCTGCGTCGGGTTGAATTCTTCTGGGTTTGTCGAGATGCACCTTCGTTTGGTTGGTTCCAGTCCTTGCTTCAG
GAAGTCGAGGCTGCCCAAGCTGATCCCAATTTTTTGCGTATCAACGTGTACCTGACGCAGAAGATCAGCGAAGACATGCTTTGGAACATCGCTGTCAATGACGCTGGTGCTGAATATGAT
CCCCTCACCCTCTTACGCTCGCGCACGATGTTTGGACGCCCCGATTGGATGACTATCTTTGGACAAATGAAGCAAGCAATTGAGGGAGGACAATATCTTCCTGGAAGCACGTCCCAGTTA
AAAACCAAAGTTGCTACATATTTCTGCGGACCTGGTGCGCTTGCTAAGGCGATCAAGGATGCTACTGTCTCCCACACCAACTCCAATGTTGAGTTCACTTTTGCAAAGGAACATTTCTGA

Retrieve as FASTA