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Entry information : LbiNOx02
Entry ID 6663
Creation 2009-04-03 (Christophe Dunand)
Last sequence changes 2009-04-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: LbiNOx02
Name LbiNOx02
Class Ancestral NADPH oxidase    [Orthogroup: NOx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Laccaria
Organism Laccaria bicolor    [TaxId: 29883 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LbiNOx02
start..stop		 S start..stop
PcNOx02 1052 0 1..604 1..609
PcarNOx02 1035 0 5..604 8..611
AbNOx02_bisporus 1004 0 1..604 1..609
CcinNOx02 999 0 3..604 2..608
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2560657..2561017 359 N° 2 2560104..2560606 501 N° 3 2559834..2560054 219 N° 4 2559506..2559781 274
N° 5 2559391..2559457 65 N° 6 2559188..2559340 151 N° 7 2559007..2559135 127 N° 8 2558863..2558956 92
N° 9 2558798..2558808 9  
complement(join(2558798..2558808,2558863..2558956,2559007..2559135,2559188..2559 340,2559391..2559457,2559506..2559781,2559834..2560054,2560104..2560606,2560657. .2561017))


exon

Literature and cross-references LbiNOx02
DNA ref. JGI genome:   LG_1 (2561017..2558798)
EST ref. GenBank:   EX777890.1 [5' end]
Protein sequence: LbiNOx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   604 (326)
PWM (Da):   %s   68705.49 (34223.2) Transmb domain:   %s   i83-105o120-142i172-194o214-236i249-271o286-304i439-461o
PI (pH):   %s   9.88 (4.97) Peptide Signal:   %s   cut: 20 range:20-345
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAYRSSGFDFSDNAPNANLEQHPDLAANAAQPVHLQRNKTERRR
LQGLQRSLTASSMKKPVEPKTLREKFSIWMINEGGRQLFFGTWIFLHLLVAVFGFMNYQLKDNLVDARALFGVTFTIARTAALILHIDVIFILLPVCRNFVSLLRRTPLNDIIPFDKNITLHKATAWSIVAGTVVHVVAHMVNFYKLAMADTDAKTTGQRVLAFLEANFNTGPGVTGWIMTVSLGIMVFFASEKR
RRAHFERFWYSHHLFVVFFINWQLHGMFCMIKPDRPPYCSSNTIGVFRYWLIGGVIWISERVLREIRSRHRTYVSKVIQHPSNVMELQIKKEKTTTRAGQYIFLSCPEISYFQWHPFTLTSAPEEDYISVHIRVVGDFTQALAKAMGCDFEKKGKEETPAGGKVVGTNVNPSVNRLLPRVMVDGPFGSASEDFLKYETVLLVGAGIGVTPFASILKSIWYRMNNFNNSKPTRLSVYFTWV
IRDFGVAEWFHSLLHAIEEQDTQGRIEINIYLTAKIKEDDMNNIILQDVGAEKDAITSLRAPTHFGRPNWDRVFGSIAEKHPETDVGVFFCGPAVLSKQLHQMSNKYSDPKGTRFFFGKE
NF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo ?, 7 introns) and 2 ESTs. Strain="S238N-H82".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCGTACCGTTCTTCCGGGTTTGACTTCTCCGACAATGCTCCTAATGCAAACCTTGAACAACATCCTGATCTGGCAGCCAATGCTGCACAACCAGTTCATCTTCAGCGCAATAAG
ACTGAGAGGAGGCGACTCCAGGGGCTGCAGCGGTCGTTGACGGCCTCTTCCATGAAGAAACCTGTTGAACCGAAGACCTTGCGCGAGAAGTTTAGTATTTGGATGATCAATGAGGGAGGA
CGGCAACTGTTTTTTGGTACATGGATCTTCTTGCACCTGCTGGTGGCCGTCTTCGGTTTCATGAACTATCAGCTCAAGGATAACTTGGTGGATGCGCGTGCATTGTTCGGCGTTACATTC
AGTGCGTCTGCCTCTTTCTCGTTACAATTCTTCCTGACACTGGATTATAAGCTCTATCGCTCGAACAGCTGCTCTAATTCTTCATATCGACGTTATCTTCATTCTCCTCCCTGTCTGCCG
TAACTTCGTCTCTCTGCTCCGTCGCACCCCACTTAATGACATTATTCCCTTCGACAAAAATATCACCTTGCACAAAGCCACTGCGTGGTCCATCGTTGCAGGCACTGTGGTTCATGTCGT
GGCGCACATGGTTAATTTCTACAAGTTGGCTATGGCAGATACCGATGCCAAGACAACCGGACAACGGGTTCTTGCCTTCCTCGAAGCCAATTTCAATACAGGGCCAGGCGTTACGGGGTG
GATTATGACGGTTTCTTTGGGAATCATGGTGTTTTTCGCCAGTGAGAAGAGACGTCGTGCTCACTTTGAGAGGTTTTGGTATTCGCACCATCTGTTCGTTGTGTTCTTCATCAATTGGCA
GTTGCATGGCATGTTCTGCATGATCAAACCCGACCGCCCTCCTTATTGCTCTTCCAACACTATCGGAGTCTTTTGGGTGAGTTTTACTCTTCATCCTTTGTCAGTTTCTCATTGAAACCC
CACAGCGCGCTATTGGCTCATTGGAGGCGTCATTTGGATTTCTGAGCGTGTCCTCCGCGAAATCCGCTCCCGTCACAGGACATATGTTTCGAAGGTCATCCAACATCCATCCAATGTCAT
GGAGCTTCAGATCAAGAAGGAGAAGACAACCACCAGAGCTGGTCAATACATCTTCCTTTCCTGCCCCGAGATTTCATACTTTCAATGGCACCCTTTCACCCTTACAAGGTTTTTTCTTCC
TTTTGCTCCCTCCCATAGGCTGTTATTGATTGTTCGAAAGTGTGCTCCTGAGGAAGACTACATCTCTGTCCACATCCGTGTCGTCGGCGACTTTACTCAAGCCTTAGCAAAGGCCATGGG
TTGCGATTTCGAGAAGAAGGGCAAGGAAGAAACCCCCGCTGGCGGAAAAGTTGTTGGAACAAATGTCAACCCTTCCGTCAACCGACTGTTGCCCCGCGTCATGGTGGATGGTCCCTTTGG
AAGTGCGAGCGAGGACTTTTTGAAATACGAAACCGTCTTGCTCGTTGGTGCTGGTATCGGTGTCACTCCCTTTGCATCGTGAGTCCCTCCTCCAGCCCATTCTCAGTTGTTGATTTACGG
TCACAGAAAATTCTGAAATCGATCTGGTATCGCATGAATAACTTTAACAACTCAAAGCCTACAAGGTTGTCCAAGGTCTGCATTTAGTAACTCCTGTGAATTTAGACGTGTAAATTCGAA
TGCAGGTGTTTACTTCACTTGGGTTATTCGTGACTTCGGCGTCGCAGAATGGTTCCACTCGCTCCTCCACGCCATAGAGGAGCAGGATACCCAAGGGAGAATTGAGATCAACATCTATCT
TACGGCGAAGATCAAGGAGGACGACATGAATAACATTATTGCACGTTTTTTCCCCAAAACAAAGAGTACTTTACTAACTTTTGCTCGTGTAGCTCTCCAAGATGTTGGCGCTGAGAAGGA
CGCCATCACCTCTCTTCGTGCACCTACTCACTTCGGAAGGCCCAACTGGGATCGCGTGTTTGGCTCCATCGCTGAGAAGCATCCTGAGACTGATGTTGGGGTGGTGAGCATCTTGCCAAT
TACGATAGTCCTTTACCGAATGTCGTTCTGCAGTTTTCTTCTGCGGCCCTGCTGTCCTTTCAAAGCAACTCCACCAAATGTCGAACAAATACTCTGATCCTAAAGGAACCAGATTCTTCT
TCGGAAAAGGCAAGTCTACCCACTCTTAAAAGATTATGGCTGACCCCGTTACCCCTCCTCTAGAGAGAATTTCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCGTACCGTTCTTCCGGGTTTGACTTCTCCGACAATGCTCCTAATGCAAACCTTGAACAACATCCTGATCTGGCAGCCAATGCTGCACAACCAGTTCATCTTCAGCGCAATAAG
ACTGAGAGGAGGCGACTCCAGGGGCTGCAGCGGTCGTTGACGGCCTCTTCCATGAAGAAACCTGTTGAACCGAAGACCTTGCGCGAGAAGTTTAGTATTTGGATGATCAATGAGGGAGGA
CGGCAACTGTTTTTTGGTACATGGATCTTCTTGCACCTGCTGGTGGCCGTCTTCGGTTTCATGAACTATCAGCTCAAGGATAACTTGGTGGATGCGCGTGCATTGTTCGGCGTTACATTC
ACTATCGCTCGAACAGCTGCTCTAATTCTTCATATCGACGTTATCTTCATTCTCCTCCCTGTCTGCCGTAACTTCGTCTCTCTGCTCCGTCGCACCCCACTTAATGACATTATTCCCTTC
GACAAAAATATCACCTTGCACAAAGCCACTGCGTGGTCCATCGTTGCAGGCACTGTGGTTCATGTCGTGGCGCACATGGTTAATTTCTACAAGTTGGCTATGGCAGATACCGATGCCAAG
ACAACCGGACAACGGGTTCTTGCCTTCCTCGAAGCCAATTTCAATACAGGGCCAGGCGTTACGGGGTGGATTATGACGGTTTCTTTGGGAATCATGGTGTTTTTCGCCAGTGAGAAGAGA
CGTCGTGCTCACTTTGAGAGGTTTTGGTATTCGCACCATCTGTTCGTTGTGTTCTTCATCAATTGGCAGTTGCATGGCATGTTCTGCATGATCAAACCCGACCGCCCTCCTTATTGCTCT
TCCAACACTATCGGAGTCTTTTGGCGCTATTGGCTCATTGGAGGCGTCATTTGGATTTCTGAGCGTGTCCTCCGCGAAATCCGCTCCCGTCACAGGACATATGTTTCGAAGGTCATCCAA
CATCCATCCAATGTCATGGAGCTTCAGATCAAGAAGGAGAAGACAACCACCAGAGCTGGTCAATACATCTTCCTTTCCTGCCCCGAGATTTCATACTTTCAATGGCACCCTTTCACCCTT
ACAAGTGCTCCTGAGGAAGACTACATCTCTGTCCACATCCGTGTCGTCGGCGACTTTACTCAAGCCTTAGCAAAGGCCATGGGTTGCGATTTCGAGAAGAAGGGCAAGGAAGAAACCCCC
GCTGGCGGAAAAGTTGTTGGAACAAATGTCAACCCTTCCGTCAACCGACTGTTGCCCCGCGTCATGGTGGATGGTCCCTTTGGAAGTGCGAGCGAGGACTTTTTGAAATACGAAACCGTC
TTGCTCGTTGGTGCTGGTATCGGTGTCACTCCCTTTGCATCAATTCTGAAATCGATCTGGTATCGCATGAATAACTTTAACAACTCAAAGCCTACAAGGTTGTCCAAGGTTTACTTCACT
TGGGTTATTCGTGACTTCGGCGTCGCAGAATGGTTCCACTCGCTCCTCCACGCCATAGAGGAGCAGGATACCCAAGGGAGAATTGAGATCAACATCTATCTTACGGCGAAGATCAAGGAG
GACGACATGAATAACATTATTCTCCAAGATGTTGGCGCTGAGAAGGACGCCATCACCTCTCTTCGTGCACCTACTCACTTCGGAAGGCCCAACTGGGATCGCGTGTTTGGCTCCATCGCT
GAGAAGCATCCTGAGACTGATGTTGGGGTGTTCTTCTGCGGCCCTGCTGTCCTTTCAAAGCAACTCCACCAAATGTCGAACAAATACTCTGATCCTAAAGGAACCAGATTCTTCTTCGGA
AAAGAGAATTTCTAG

Retrieve as FASTA