View Redoxidase 6747

Entry information : PplPrxQ02

Entry ID	6747
Creation	2009-05-01 (Christophe Dunand)
Last sequence changes	2009-05-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-17 (Catherine Mathe (Scipio))

Peroxidase information: PplPrxQ02

Name

PplPrxQ02

Class

Atypical 2-Cysteine peroxiredoxin (type Q) [Orthogroup: PrxQ001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Postia

Organism

Postia placenta [TaxId: 104341 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PplPrxQ02 start..stop	S start..stop
LbiPrxQ02	300	1.43e-104	1..227	1..226
CcinPrxQ	266	6.78e-91	1..228	1..230
PcarPrxQ02	265	1.22e-90	15..214	4..214
HanPrxQ02	263	5.58e-89	42..228	90..274

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6747' 'complement(join(200823..200874,200934..201088,201147..201268,201337..201480,201531..201585,201714..201881))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	201714..201881	166	N° 2	201531..201585	53	N° 3	201337..201480	142	N° 4	201147..201268	120
N° 5	200934..201088	153	N° 6	200823..200874	50
complement(join(200823..200874,200934..201088,201147..201268,201337..201480,2015 31..201585,201714..201881))

Literature and cross-references PplPrxQ02

DNA ref.	JGI genome: scaffold_95 (201881..200823)
mRNA ref.	JGI transcript: 116341
EST ref.	GenBank: FL597077.1

Protein sequence: PplPrxQ02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	231
PWM (Da):	24569.77
PI (pH):	9.1

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTGRTKATAEPTEPTRRSSRISAQPKAEVKEPVQKATAKSKKRTADVDGDSPAVKKSKAEEEAAEAPDTAESNAAVAKLATIDVGDALPSLTLQNEKGEDVEVSTLAAEKGVILFLVPKA
DTPGCTTQACGFRDIYPDFTAHNFDVYCLSADSASAQTKWQTKNLPYPLLSDPKRQLISALGAGEGGKTKRSHFVFEKGGKLVEKRLPVKPADSPRLALEYVKNLNSASA

Retrieve as FASTA

Remarks

Complete sequence from genomic (6 introns) and 7 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACTGGCCGTACCAAAGCAACTGCTGAGCCTACTGAGCCTACCAGGCGGTCTTCTCGCATTTCTGCACAACCGAAAGCAGAAGTGAAGGAACCCGTTCAAAAGGCTACTGCAAAATCC
AAGAAGAGAACAGCTGATGTGGATGGAGACAGTCCTGCTGTAAAAAAGGTACGCGTTAGCGGCTTGGCGAAGGTTCTGGAGACGTTCTGTATTTTGCACAGTCGCTATGAAGTGTTATTG
TATCGTTGTGTTCTCAAGACTGACCAGGGTGACTGCTTATCCGTTCTGCTCTGCAGAGAGCAAGGCCGAGGAGGAGGCTGCCGAGGCACCTGATACTGCGGAATCCAATGCGGGTATGTC
CATAGAATGATGAGGAAGCGTGCACTCTTGATACATTTTATAGCTCTGTTGCCAAGTTGGCGACGATCGATGTCGGAGATGCTCTGCCTTCTCTGACGCTCCAGAACGAGAAGGGGGAGG
ACGTAGAGGTGTCGACACTGGCAGCGGAGAAAGGGGTGATCCTGTTCCTTGTGCCCAAGGCTGATACACGTGAGTTCAACTGATTATACATGATTACTTCCAATTTAACTCGTTGTTGAA
TTCGAAATGTGTTTCAGCCCCGGCTGTACCACCCAAGCTTGCGGCTTCCGCGATATATACCCCGACTTCACTGCCCACAACTTTGATGTCTACTGTTTGAGTGCGGATAGTGCGTCTGCT
CAGACCAAGTGGCAAACAAAGGTTCGCATGGCGTCAGTTGTGTTGCAGTTCTTTGATGCATGGTTCATCTGATCGGTAGAAAAAAACCTGCCCTATCCCTTGCTCTCGGACCCTAAGCGC
CAGTTGATCAGCGCCCTAGGTGCTGGGGAGGGTGGAAAGACCAAGCGTAGCCACTTCGTCTTCGAGAAGGGCGGGAAACTCGTCGAGAAAAGGCTTCCCGTGAAACCTGCTGACAGGTAT
GTAAATCATTTGGTGGAATCTTTGCGTGAGTAACGACATGACACGCGATGCATAGCCCCCGAGACTCGCTCTTGAGTACGTGAAGAATCTCAATTCTGCTTCTGCCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA