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Entry information : PgrDyPrx03
Entry ID 6779
Creation 2009-05-11 (Christophe Dunand)
Last sequence changes 2012-04-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-05 (Christophe Dunand)
Peroxidase information: PgrDyPrx03
Name PgrDyPrx03
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Fungi/Metazoa; Fungi; Basidiomycota; Basidiomycota
Organism Puccinia graminis f. sp. tritici    [TaxId: 56615 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PgrDyPrx03
start..stop		 S start..stop
PgrDyPrx05 876 0 1..519 1..519
PgrDyPrx06 815 0 14..519 1..506
PgrDyPrx04 800 0 1..519 1..518
PgrDyPrx02 737 0 33..501 70..537
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6779' 'complement(join(793113..793170,793263..793330,793404..793526,793618..793730,793808..793899,793971..794085,794159..794453,794548..795145,795433..795530)) ' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 795433..795530 96 N° 2 794548..795145 596 N° 3 794159..794453 293 N° 4 793971..794085 113
N° 5 793808..793899 90 N° 6 793618..793730 111 N° 7 793404..793526 121 N° 8 793263..793330 66
N° 9 793113..793170 56  
complement(join(793113..793170,793263..793330,793404..793526,793618..793730,7938 08..793899,793971..794085,794159..794453,794548..795145,795433..795530))


exon

Literature and cross-references PgrDyPrx03
DNA ref. JGI genome:   supercontig_2_16 (795530..793113)
Cluster/Prediction ref. JGI gene:   27843
Protein sequence: PgrDyPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   519 (492)
PWM (Da):   %s   56913.08 (53979.4)  
PI (pH):   %s   5.38 (5.14) Peptide Signal:   %s   cut: 28 range:28-519
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSTLTFSVSNLLFIILLSILGIRTTKAELSSSQVDLANVQGDIIIGLQKRFEAFWFCTLKSDSASIEGFRRSLKTDLLPLITTTQGVIDAQKIIDNYQRNQTEGKTKRLLPITHANLGFTFNGLRKLGMNAEEIPTGKNGVFSKGQKVDAVK
NLGDPVDQATKKLKTWSDDFSDEVNSIDFVVLITAPDSHFLNKKLDQIGKIFDGYLQNSFLRQGNVRPGDQFGHEHFGFDSISAPKIEGVNAQPEDKKAGVVEPGVILLGQPSSGGNSSA
TDPKQAWLKDGSFMAFRELQQLVPEFQNFCDESAKSVKHLNISGDFIGARIVGRWKSGAPLSLAPNEDNPELSEAQDFDYSDELKQERCPYAAHIRKANPRNGIQSGADLRKTVLPHLMI
RNGIPGPELTEEETDMMKTKENRGLLFVSYQSEIADGFQFVQTWSNNPRFPAQTAANVTAGLDLLAGQTSDESPRTAQNIIPLGSEGNTDPNNTLTAFQPFIVPLGGEYFLMPSIKAINE
TLGL

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAACCTTAACATTTTCCGTCTCTAACTTGCTTTTCATCATTTTACTCAGCATACTAGGAATCCGCACCACCAAGGCGGAGCTATCGTCTTCCCAGTGGGTTTTGCTTCCCATCTTC
ACTCCATCAATTTCTCATCTTCCTTTAAAGTGTACATTTGGCGAGTGTCTTGATTCTACTCGCCAGGTCTATCATTTTTCTTTGTGATTTCGACCACCTTCCAACTGAATCGAATGACAT
GCGACTTGACTGAGCCATAGCCATCTCAGAAATAAGACGTTGCAAAAGCAAAACATTATATGACGCTTCATGACTCATGTTGCATTTCCAATACTTTCCTTGCTGACGTACATCTTGTTT
ATCTCTCATTTTTTCTGCTTGATAGGGGGTCGATCTGGCAAACGTCCAAGGCGATATTATTATTGGTTTGCAGAAACGTTTTGAAGCATTTTGGTTCTGCACTTTAAAATCAGATTCAGC
ATCAATCGAAGGCTTTCGCAGAAGCCTAAAAACCGACTTGCTTCCATTAATTACAACAACACAAGGTGTGATTGATGCACAAAAGATCATAGATAATTATCAACGAAACCAGACAGAAGG
GAAGACCAAGCGATTGCTGCCCATTACACACGCTAATCTAGGATTTACATTTAATGGATTGAGAAAGTTGGGCATGAACGCAGAAGAGATCCCGACAGGAAAAAATGGAGTATTTTCAAA
AGGTCAAAAAGTTGACGCCGTGAAAAACTTGGGAGATCCGGTGGATCAAGCAACGAAAAAGTTAAAAACCTGGTCTGACGATTTCTCAGACGAAGTTAACTCGATTGATTTCGTGGTTCT
GATCACTGCCCCGGACTCGCATTTCCTGAATAAAAAACTCGACCAAATTGGCAAGATATTTGATGGGTACTTGCAAAACTCTTTCCTTCGTCAAGGTAACGTCAGACCTGGTGACCAGTT
TGGTCATGAGCATTTCGGATTTACTGTTGAGTAACATCATTCATTTCATTCTGTTATTCGTGATACGGATTCATGAGTTTCTCAATCAGTGGCTGACTAAGAATGGGCAACTTAAAAAGG
AGACTCGATTTCGGCGCCAAAGATTGAAGGTGTAAATGCTCAACCAGAAGATAAAAAGGCCGGAGTAGTTGAACCAGGGGTTATCTTACTTGGACAACCTTCTTCCGGTGGGAACAGTAG
CGCCACGGATCCCAAACAAGCATGGCTCAAAGACGGATCGTTTATGGCTTTCAGAGAGCTCCAACAACTTGTACCAGAGTTTCAAAATTTCTGCGATGAGTCTGCTAAAAGTGTCAAACA
CTTGAATATATCTGGTGATTTTATTGGTGCCAGAATCGTGGGCAGGTGGAAATCAGGTGTGATTTTGGGAGATTTTCTCAAGACTTTAGCAGCCAAGCAAGTGCCCGATTAACGTTTCTT
TTTTCTCAGGAGAGCACCCCTCAGTTTGGCTCCCAACGAGGATAATCCGGAATTAAGTGAAGCGCAGGATTTTGACTATTCCGATGAATTGAAACAAGAACGTTGTCCCTATGCTGCTCA
CATCAGGTACTGTCTTCTGACGCGATTGGCGAGAATTGCATGCTCAGAATAGTTTTCTTTCTTCGTTTCAACTTTAGGAGAAAGCTAACCCACGCAATGGCATTCAATCCGGCGCAGACC
TCCGAAAAACTGTCTTGCCTCACCTCATGATCAGGAATGGGATTCCCTATGGTTTGTTTTTGTGGAAGCATCAACTTCATATCAGAAAGGATAAAAGCTAACATTGATATTCTGAATTTA
ACTTGTAGGCGCCCCGAGCTCACAGAGGAAGAAACAGACATGATGAAAACAAAAGAAAACCGTGGTTTGTTGTTTGTCTCTTACCAAAGTGAAATTGCGGACGGATTTCAATTTGTCCAA
AAGGTAACCCTATTTTTAATCAGATAATATTCTTTCTTTCGATATAAGTGATAAAAGAATAACTCTATCTTTTTGGTCCTTTCCTTGAACCAAGACACATGGAGTAATAATCCTCGTTTT
CCCGCGCAAACGGCCGCCAACGTAACCGCAGGATTAGACTTGTTAGCCGGTCAAACCAGCGATGAATCGCCACGAACCGCTCAAAACATCATTCCTTTGGTAAGTAGTATTGGTTAATTT
GTTTTTCAAATAAGATATTCATTTTTTTGGCTATATGTTTGCAACACCACAGGGGGTTCGGAAGGGAACACTGATCCCAACAATACGTTGACCGCGTTTCAACCTTTCATTGTTCCTCTT
GGGTCAGTTCAATGAATCCTCGAGTTCACAACATATCGCTGAAATTTCTGTTTTTCACATCCGCTGATGGGATCCTCACGCGTCTAATCTGTAGTGTGGAGAGTACTTTTTGATGCCATC
CATCAAAGCCATCAATGAAACACTTGGCCTTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAACCTTAACATTTTCCGTCTCTAACTTGCTTTTCATCATTTTACTCAGCATACTAGGAATCCGCACCACCAAGGCGGAGCTATCGTCTTCCCAGGTCGATCTGGCAAACGTCCAA
GGCGATATTATTATTGGTTTGCAGAAACGTTTTGAAGCATTTTGGTTCTGCACTTTAAAATCAGATTCAGCATCAATCGAAGGCTTTCGCAGAAGCCTAAAAACCGACTTGCTTCCATTA
ATTACAACAACACAAGGTGTGATTGATGCACAAAAGATCATAGATAATTATCAACGAAACCAGACAGAAGGGAAGACCAAGCGATTGCTGCCCATTACACACGCTAATCTAGGATTTACA
TTTAATGGATTGAGAAAGTTGGGCATGAACGCAGAAGAGATCCCGACAGGAAAAAATGGAGTATTTTCAAAAGGTCAAAAAGTTGACGCCGTGAAAAACTTGGGAGATCCGGTGGATCAA
GCAACGAAAAAGTTAAAAACCTGGTCTGACGATTTCTCAGACGAAGTTAACTCGATTGATTTCGTGGTTCTGATCACTGCCCCGGACTCGCATTTCCTGAATAAAAAACTCGACCAAATT
GGCAAGATATTTGATGGGTACTTGCAAAACTCTTTCCTTCGTCAAGGTAACGTCAGACCTGGTGACCAGTTTGGTCATGAGCATTTCGGATTTACTGACTCGATTTCGGCGCCAAAGATT
GAAGGTGTAAATGCTCAACCAGAAGATAAAAAGGCCGGAGTAGTTGAACCAGGGGTTATCTTACTTGGACAACCTTCTTCCGGTGGGAACAGTAGCGCCACGGATCCCAAACAAGCATGG
CTCAAAGACGGATCGTTTATGGCTTTCAGAGAGCTCCAACAACTTGTACCAGAGTTTCAAAATTTCTGCGATGAGTCTGCTAAAAGTGTCAAACACTTGAATATATCTGGTGATTTTATT
GGTGCCAGAATCGTGGGCAGGTGGAAATCAGGAGCACCCCTCAGTTTGGCTCCCAACGAGGATAATCCGGAATTAAGTGAAGCGCAGGATTTTGACTATTCCGATGAATTGAAACAAGAA
CGTTGTCCCTATGCTGCTCACATCAGGAAAGCTAACCCACGCAATGGCATTCAATCCGGCGCAGACCTCCGAAAAACTGTCTTGCCTCACCTCATGATCAGGAATGGGATTCCCTATGGC
CCCGAGCTCACAGAGGAAGAAACAGACATGATGAAAACAAAAGAAAACCGTGGTTTGTTGTTTGTCTCTTACCAAAGTGAAATTGCGGACGGATTTCAATTTGTCCAAAAGACATGGAGT
AATAATCCTCGTTTTCCCGCGCAAACGGCCGCCAACGTAACCGCAGGATTAGACTTGTTAGCCGGTCAAACCAGCGATGAATCGCCACGAACCGCTCAAAACATCATTCCTTTGGGTTCG
GAAGGGAACACTGATCCCAACAATACGTTGACCGCGTTTCAACCTTTCATTGTTCCTCTTGGTGGAGAGTACTTTTTGATGCCATCCATCAAAGCCATCAATGAAACACTTGGCCTTTGA

Retrieve as FASTA