View Redoxidase 6852

Entry information : Cn1CysPrx01_JEC21

Entry ID	6852
Creation	2009-06-22 (Christophe Dunand)
Last sequence changes	2009-06-22 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-07 (Catherine Mathe (Scipio))

Peroxidase information: Cn1CysPrx01_JEC21

Name

Cn1CysPrx01_JEC21

Class

1-Cysteine peroxiredoxin [Orthogroup: 1CysPrx001]

Taxonomy

Eukaryota Fungi Basidiomycota Tremellomycetes Tremellaceae Filobasidiella

Organism

Cryptococcus neoformans (Filobasidiella neoformans) [TaxId: 5207 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Cn1CysPrx01_JEC21 start..stop	S start..stop
Cn1CysPrx01_grubiiH99	464	2.15e-169	1..233	1..233
Sre1CysPrx	291	6.03e-101	3..227	4..217
Um1CysPrx	290	1.4e-100	3..227	4..217
Gin1CysPrx01	276	2.37e-95	1..226	1..215

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6852' 'complement(join(38883..38933,39000..39244,39302..39641,39721..39786))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	39721..39786	64	N° 2	39302..39641	338	N° 3	39000..39244	243	N° 4	38883..38933	49
complement(join(38883..38933,39000..39244,39302..39641,39721..39786))

Literature and cross-references Cn1CysPrx01_JEC21

DNA ref.	JGI genome: NC_006680 (39786..38883)
mRNA ref.	GenBank: XM_567781

Protein sequence: Cn1CysPrx01_JEC21

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	233 (311)
PWM (Da):	25831.35 (33579.8)
PI (pH):	5.14 (8.27)	Peptide Signal:	cut: 26 range:26-336

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSLRLGDIAPDFEADTTHGRIKFHDWLDGSWAILFSHPDDFTPVCTTEan>LSAVALSYADFASRGVKLIGLSANNIASHEGWIKDINALKPDAPALEFPIIGDEDRTVSELYGMLDKLDKTNVDKKGIPFTVRTVFVIDPKKQIRLTLAYPASTGRNFPELLRVIDSLQLGDKHRITTPANWGIPDPKTGQVEERVIVHPSVQGEEVKQLFGDDVETVPYLRFTSNPSKKEVTA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 11, 3 introns). Strain="JEC21".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTCTCCGACTTGGTGATATTGCCCCCGACTTTGAGGCGGATACTACGCACGGCCGCATCAAAGTGAGTTCAAATTCCCCCATCCCATTTCTCGCTCGTTCGCTCGCTCGCTTCCTC
GGCAACTGACCAGCTTTTGTGACAGTTTTCCACGACTGGCTCGACGGCTCGTGGGCCATCCTCTTCTCCCACCCTGACGACTTCACCCCCGTCTGCACCACGGAGCTTTCAGCCGTTGCT
CTCTCTTACGCCGATTTCGCCTCGCGGGGTGTCAAGCTCATCGGTCTTTCCGCGAACAATATTGCCTCGCACGAAGGGTGGATCAAGGATATCAATGCGTTGAAGCCTGATGCCCCTGCG
TTGGAGTTTCCGATTATAGGGGACGAGGACAGGACAGTGTCAGAGTTGTATGGGATGCTGGATAAGCTTGATAAGACGAATGTGGATAAGAAGGGGATACCGTTTACGGTCAGGACTGTT
TTCGTCAGTAAGTATCAACAACAGTACATATTTGTTATGGCCTGTGCTGATAAAATGTACATAGTCTCGACCCAAAGAAACAGATCCGCCTCACCCTCGCTTATCCCGCGTCTACAGGCC
GCAACTTTCCCGAACTCTTGCGTGTCATTGACTCTCTCCAGCTGGGCGACAAGCACCGTATCACCACGCCTGCCAACTGGGGGATTCCCGATCCCAAGACCGGGCAGGTCGAGGAGAGGG
TTATCGTCCACCCGTCTGTACAGGGCGAGGAGGTGAAGCAGTTGTTTGGAGATGATGTTGAGACTGTTTATGTGAGTCATGGTCGTTGTGCATTGGGCGTGGGCTTGGGACGGTACGGTG
CTGATACGTTTTGGTAGCCCCTTACCTCCGCTTTACATCCAACCCTTCCAAGAAGGAGGTCACGGCTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTCTCCGACTTGGTGATATTGCCCCCGACTTTGAGGCGGATACTACGCACGGCCGCATCAAATTCCACGACTGGCTCGACGGCTCGTGGGCCATCCTCTTCTCCCACCCTGACGAC
TTCACCCCCGTCTGCACCACGGAGCTTTCAGCCGTTGCTCTCTCTTACGCCGATTTCGCCTCGCGGGGTGTCAAGCTCATCGGTCTTTCCGCGAACAATATTGCCTCGCACGAAGGGTGG
ATCAAGGATATCAATGCGTTGAAGCCTGATGCCCCTGCGTTGGAGTTTCCGATTATAGGGGACGAGGACAGGACAGTGTCAGAGTTGTATGGGATGCTGGATAAGCTTGATAAGACGAAT
GTGGATAAGAAGGGGATACCGTTTACGGTCAGGACTGTTTTCGTCATCGACCCAAAGAAACAGATCCGCCTCACCCTCGCTTATCCCGCGTCTACAGGCCGCAACTTTCCCGAACTCTTG
CGTGTCATTGACTCTCTCCAGCTGGGCGACAAGCACCGTATCACCACGCCTGCCAACTGGGGGATTCCCGATCCCAAGACCGGGCAGGTCGAGGAGAGGGTTATCGTCCACCCGTCTGTA
CAGGGCGAGGAGGTGAAGCAGTTGTTTGGAGATGATGTTGAGACTGTTTATCCTTACCTCCGCTTTACATCCAACCCTTCCAAGAAGGAGGTCACGGCTTAA

Retrieve as FASTA