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Entry information : AvePrx112-1A
Entry ID 6868
Creation 2009-07-13 (ester Simonetti)
Last sequence changes 2012-05-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-09 (Christophe Dunand)
Peroxidase information: AvePrx112-1A
Name AvePrx112-1A
Class Class III peroxidase    [Orthogroup: Prx057]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation N/D
Tissue type Roots
Inducer Cyst nematode infection
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx112-1A
start..stop		 S start..stop
TaPrx02-1D 636 0 1..314 1..314
AvePrx112-1B 626 0 1..314 1..314
TmPrx03 622 0 1..314 1..314
TaPrx02-1A 622 0 1..314 1..314
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6868' 'join(150..359,476..652,750..1307)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 150..359 208 N° 2 476..652 175 N° 3 750..1307 556  
join(150..359,476..652,750..1307)


exon

Literature and cross-references AvePrx112-1A
Literature Simonetti E, Veronico P, Melillo MT, Delibes A, Andrés MF, Lopez-Braga I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Molecular Plant-Microbe Interactions, 22:

DNA ref. GenBank:   EU595569
Protein sequence: AvePrx112-1A
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   314 (291)
PWM (Da):   %s   32431.08 (30327.0)  
PI (pH):   %s   8.15 (8.21) Peptide Signal:   %s   cut: 24 range:24-314
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAMGSASCISLVVLVALATAASGQLSSTFYDTSCPRALATIKSGV
AAAVSSDPRMGASLLRLHFHDCFVQGCDASVLLSGMEQNAGPNVGSLRGFSVIDSIKTQLESICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPGSSRSQLEAAFLKKNLNTVDMVALSGAHTIG
KAQCSNFRNRIYGGDTNINTAFATSLKANCPQSGGNSNLANLDTTTPNAFDNAYYTNLLSQKGLLHSDQVLFNNDTTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCS
KVNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATGGGTTCTGCTTCTTGCATTTCTCTGGTGGTGCTCGTGGCTCTGGCCACGGCGGCGTCGGGGCAGCTGTCATCGACGTTCTACGACACGTCGTGCCCCAGGGCTCTGGCCACC
ATCAAGAGCGGCGTGGCGGCCGCCGTGAGCAGCGACCCCCGCATGGGTGCCTCCCTGCTCAGGCTGCACTTCCACGACTGCTTTGTCCAAAAGCAAGTTTCACATAATATATCGGCTCTT
TTTTCCTTAACTAACTTTCTTGAACTGCCCGGATTTCCGGATTTAACAAAAATTGTACCGTGAACTAATATGTTTATGTTGGCTACAGGGCTGTGATGCATCTGTTCTGCTGTCTGGCAT
GGAACAAAACGCGGGTCCGAACGTGGGGTCGCTGAGGGGCTTCAGCGTCATCGACAGCATCAAGACCCAGCTGGAGAGTATATGCAAGCAGACCGTCTCCTGCGCCGACATCCTCACCGT
CGCCGCCCGCGACTCCGTTGTTGCCCCGTAAGAACATCTTAGTACTATATTCAGTTTCATATATAATCGATGCTACGTAAAGCTAGTACTCCAGTGCTCAATTTCTTGCTTGGTCCGCAT
GCAGCTTGGAGGGCCGTCATGGACTGTTCCACTCGGGAGACGGGACTCCACCACCGCAAGCGCCTCGCTGGCGAACAGTGACCTCCCTGGCCCAGGCTCTAGCCGGTCACAGCTCGAGGC
TGCGTTCCTCAAGAAGAACCTTAACACGGTCGACATGGTCGCGCTCTCAGGCGCGCACACCATCGGGAAGGCCCAGTGCTCCAACTTCCGGAATCGGATCTACGGCGGTGACACCAACAT
CAACACTGCCTTCGCCACGTCTCTCAAGGCCAACTGCCCCCAGTCCGGCGGCAACAGCAACCTGGCGAACCTGGACACAACGACGCCCAACGCGTTCGACAACGCCTACTACACCAACCT
CCTGTCACAGAAAGGGCTCCTGCACTCGGACCAGGTGCTCTTCAATAACGACACCACCGACAACACCGTCCGCAACTTCGCGTCCAACGCCGCGGCCTTCAGCAGCGCCTTCACGACGGC
CATGATTAAGATGGGAAACATCGCGCCGCTCACCGGGACGCAGGGCCAGATCAGGCTCAGCTGCTCCAAGGTGAACTCGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATGGGTTCTGCTTCTTGCATTTCTCTGGTGGTGCTCGTGGCTCTGGCCACGGCGGCGTCGGGGCAGCTGTCATCGACGTTCTACGACACGTCGTGCCCCAGGGCTCTGGCCACC
ATCAAGAGCGGCGTGGCGGCCGCCGTGAGCAGCGACCCCCGCATGGGTGCCTCCCTGCTCAGGCTGCACTTCCACGACTGCTTTGTCCAAGGCTGTGATGCATCTGTTCTGCTGTCTGGC
ATGGAACAAAACGCGGGTCCGAACGTGGGGTCGCTGAGGGGCTTCAGCGTCATCGACAGCATCAAGACCCAGCTGGAGAGTATATGCAAGCAGACCGTCTCCTGCGCCGACATCCTCACC
GTCGCCGCCCGCGACTCCGTTGTTGCCCTTGGAGGGCCGTCATGGACTGTTCCACTCGGGAGACGGGACTCCACCACCGCAAGCGCCTCGCTGGCGAACAGTGACCTCCCTGGCCCAGGC
TCTAGCCGGTCACAGCTCGAGGCTGCGTTCCTCAAGAAGAACCTTAACACGGTCGACATGGTCGCGCTCTCAGGCGCGCACACCATCGGGAAGGCCCAGTGCTCCAACTTCCGGAATCGG
ATCTACGGCGGTGACACCAACATCAACACTGCCTTCGCCACGTCTCTCAAGGCCAACTGCCCCCAGTCCGGCGGCAACAGCAACCTGGCGAACCTGGACACAACGACGCCCAACGCGTTC
GACAACGCCTACTACACCAACCTCCTGTCACAGAAAGGGCTCCTGCACTCGGACCAGGTGCTCTTCAATAACGACACCACCGACAACACCGTCCGCAACTTCGCGTCCAACGCCGCGGCC
TTCAGCAGCGCCTTCACGACGGCCATGATTAAGATGGGAAACATCGCGCCGCTCACCGGGACGCAGGGCCAGATCAGGCTCAGCTGCTCCAAGGTGAACTCGTGA

Retrieve as FASTA