View Redoxidase 6873

Entry information : AvePrx114-1B

Entry ID	6873
Creation	2009-07-13 (ester Simonetti)
Last sequence changes	2012-05-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-09 (Christophe Dunand)

Peroxidase information: AvePrx114-1B

Name

AvePrx114-1B

Class

Class III peroxidase [Orthogroup: Prx064]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops

Organism

Aegilops ventricosa (Goatgrass) (Triticum ventricosum) [TaxId: 116981 ]

Cellular localisation

N/D

Tissue type

Roots

Inducer

Cyst nematode infection

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AvePrx114-1B start..stop	S start..stop
TaPrx60-1D	644	0	1..321	1..321
AvePrx114-1C	637	0	1..321	1..321
TaPrx60-2B	632	0	1..321	1..321
TaPrx60-1A	627	0	1..321	1..321

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6873' 'join(65..280,666..857,950..1507)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	65..280	214	N° 2	666..857	190	N° 3	950..1507	556
join(65..280,666..857,950..1507)

Literature and cross-references AvePrx114-1B

Literature	Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009).
DNA ref.	GenBank: EU595580.1

Protein sequence: AvePrx114-1B

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	321 (298)
PWM (Da):	33441.77 (31241.6)
PI (pH):	8.65 (8.76)	Peptide Signal:	cut: 24 range:24-321

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAMAMAPSLSVLLLLCLAAAASASPPLSPQFYAKSCPRALATIKS
AVTAAVRSEPRMGASLLRLHFHDCFVQGCDASVLLSDTATFTGEQGAAPNARSIRGMNVIDNIKAQVEAVCRQTVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLSLANSDLPAPSFDLANLTANFAAKGLSVTDMVALSG
GHTIGQSQCRFFRSRLYNETNIDAAFATSLKANCPRTTSSGNSSLAPLDTTTPNGFDNAYYSNLMSQKGLLHSDQVLINDGRTAGLVRTYSSASAQFNRDFAAAMVRMGNISPLTGAQGQ
IRLSCSRVN*

Retrieve as FASTA

Remarks

complete sequence from genomic (introns 1 and 2).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAATGGCAATGGCTCCTTCTCTGTCGGTGCTGTTGCTCCTGTGCCTAGCAGCGGCCGCCTCGGCGTCGCCGCCGCTTTCCCCTCAGTTCTACGCCAAGTCGTGCCCCAGGGCGCTG
GCAACCATCAAGAGTGCCGTGACCGCCGCCGTGAGGAGTGAGCCCCGCATGGGAGCGTCGCTGCTCCGGCTGCATTTCCACGACTGCTTTGTCCAAAAGCAAGTCCCTCTCATCTATCGT
GTCCCTTTACTTACTACTCTCGTACTTTTATATTGCATATATTACTGCTTGTACTTAATTTAGTAGGTCTCCTAGTCCTAGATCGACCAGTTAATCACACTGTCTTCAGAGTCATTGCAG
TATCAAAAAGCTAGTGGAATGGAAAACTGCATATATATGTAGGAGTATCACAAGTTGACTCCAGTCCATGCATGCATGGCCATTCTAATTAATCTGACTTTTCAACTCTTTTTTTACAGT
GACTTTTCAACATTCTTCAGTTCAAATCAATTATAACAGAATTAGAAATTTATGTAGGAGTACTACTACTGAATTTATCTTGACGGAAGAAATTTCTTATGTGCGTGACGCATGATGCAT
CAGGGCTGCGATGCGTCCGTGCTGCTGAGCGACACGGCCACCTTCACCGGCGAGCAGGGGGCAGCTCCCAACGCCCGCTCCATTCGAGGCATGAACGTCATCGACAACATCAAGGCGCAG
GTCGAGGCCGTGTGCAGGCAGACTGTCTCCTGCGCCGACATCCTCGCCGTCGCCGCCCGTGACTCCGTCGTCGCCCCGTAAGATCGACCAGGCCGTGTACATGCAGTTAATTTGCTGAAC
GCACGCGACAGTAAATTAAGTGACTTGGTTCTTTACTAATCGCTTGCAGCTGGGAGGGCCTTCGTGGACCGTTCCTCTGGGGAGGAGGGACTCCACGACGGCGAGCCTTTCGCTGGCGAA
CAGCGACCTGCCTGCACCGTCCTTCGACCTCGCCAACCTCACCGCCAACTTCGCCGCCAAGGGGCTCAGCGTGACCGACATGGTCGCCCTCTCTGGCGGCCACACGATCGGACAATCGCA
GTGCCGGTTTTTCAGGAGCAGGCTCTACAACGAGACCAACATCGACGCGGCCTTCGCGACATCTCTCAAGGCCAACTGCCCCCGGACGACCAGCTCCGGCAACAGCAGCCTGGCGCCGCT
GGACACGACGACGCCCAACGGGTTCGACAACGCATACTACAGCAACCTGATGTCCCAGAAGGGGCTCCTGCACTCCGACCAGGTGCTGATCAACGACGGACGCACCGCCGGCCTGGTCCG
GACGTACTCGTCGGCGTCGGCACAGTTCAACAGGGACTTCGCGGCGGCCATGGTGAGGATGGGGAACATCAGCCCGCTCACCGGGGCGCAGGGGCAGATCAGGCTCAGCTGCTCCAGGGT
GAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA