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Entry information : BrPrx68-1Aa_other (Bra006769)
Entry ID 6882
Creation 2009-08-03 (Christophe Dunand)
Last sequence changes 2012-07-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx68-1Aa_other (Bra006769)
Name (synonym) BrPrx68-1Aa_other (Bra006769)
Class Class III peroxidase    [Orthogroup: Prx070]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx68-1Aa_other
start..stop		 S start..stop
TsPrx67 525 0 1..324 1..326
AtPrx68 497 2.7e-179 2..324 5..325
BrPrx67-1Aa_other 496 4.1e-179 11..324 4..316
AhalPrx62 484 6.48e-174 1..324 1..324
Literature and cross-references BrPrx68-1Aa_other (Bra006769)
EST ref. GenBank:   EX048718.1 [5' end]  EX052244.1 [Fragment]
Protein sequence: BrPrx68-1Aa_other (Bra006769)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (298)
PWM (Da):   %s   35753.86 (32655.4)  
PI (pH):   %s   8.83 (8.91) Peptide Signal:   %s   cut: 27 range:27-324
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEYNKQRTML IAVLLIIMWS CCYSHAQLSS DFYKESCPSL FYAVRREVQR AVTRERRMAA SLLRLFFHDC FVNGCDGSIL LDDTSSSMGE KTAGPNNNSV RGFDVVDKIK SRVERLCPGV  VSCADILAII ARDSVLLLDG PGWSVKLGRR DSTTASFTTA NSGVIPPPTS TLDNLINRFR AQGLSSRDMV ALSGAHTIGQ ARCVTFRDRI YNESNNIELS FALSRQRSCS AASGSSDNNE 
ATLDIHSPGR FDLNYYRQLL NHRGLLTSDQ VLYSGGSTDS LVVSYSRSLN AFYRDFVRGM VKMGDIKPLT GSSGEIRNNC RRPN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2) and 3 ESTs. Incorrect prediction from Phytozome: extra intron in 3'end. Cultivar="Chiifu", sub_species="pekinensis".