1. Browse the Database
  2. View Redoxidase
Entry information : BoPrx24_other
Entry ID 6895
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-08-04 (Christophe Dunand)
Peroxidase information: BoPrx24_other
Name BoPrx24_other
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx24_other
start..stop		 S start..stop
BrPrx24-1Aa_other 276 1.11e-94 1..139 221..360
TsPrx24 260 1.75e-88 1..139 219..357
BstrPrx84 258 7.37e-88 1..139 210..348
AlyPrx24 258 7.92e-88 1..139 208..346
Literature and cross-references BoPrx24_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea
DNA ref. GenBank:   BH946625.1 [3' end]
Protein sequence: BoPrx24_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   139
PWM (Da):   %s   14721.41 Transmb domain:   %s   o256-278i
PI (pH):   %s   9.34
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAHTIGTARC GVFSRRLLNF TGKGDTDPSL NSSYASFLKS KCSDKSQRLN STAVVGMDPT GALSFDSGYF VSLLQHKGLF TSDAALLTDP SAAHIASVFQ NSESFLAQFG RSMIKMSSIK 
VLTLGDEGGE IRRNCRVVN 

Retrieve as FASTA  
Remarks Partial sequence from GSS (last exon). No EST.