1. Browse the Database
  2. View Redoxidase
Entry information : SmPrx07-2_11 (SmPrx07b_11)
Entry ID 6999
Creation 2009-10-02 (Christophe Dunand)
Last sequence changes 2009-10-02 (Christophe Dunand)
Sequence status complete
Reviewer Paula Nunes
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx07-2_11 (SmPrx07b_11)
Name (synonym) SmPrx07-2_11 (SmPrx07b_11)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx07-2_11
start..stop		 S start..stop
SmPrx07-1_23 627 0 1..320 1..320
PtaPrx14 409 2.64e-144 4..320 5..328
PabPrx235 405 8.18e-143 21..320 25..328
PabPrx50 400 1e-140 21..320 25..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6999' 'join(1787165..1787368,1787448..1787639,1787719..1788285)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1787165..1787368 202 N° 2 1787448..1787639 190 N° 3 1787719..1788285 565  
join(1787165..1787368,1787448..1787639,1787719..1788285)


exon

Literature and cross-references SmPrx07-2_11 (SmPrx07b_11)
DNA ref. Phytozome 12:   scaffold_11 (1787165..1788285)
EST ref. GenBank:   FE462458.1 [5' end]  FE482980.1 [3' end]
Protein sequence: SmPrx07-2_11 (SmPrx07b_11)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (299)
PWM (Da):   %s   34031.7 (31727.4)  
PI (pH):   %s   4.94 (4.72) Peptide Signal:   %s   cut: 22 range:22-320
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGYEVLATVLLTILFRRSVAQLSPSFYNSSCPTVETVVTNTLQQ
AMQSDVRIAASLLRVHFHDCFVNGCDASVLLDDTANFTGEKTAAPNNASLRGFDVIDQMKSQVDSVCNNTVSCADILAIAAKAAVVLSGGPSWTVQLGRRDSTTANFSLAQANIPPPTSTNAQLIAAYQNVGLSTQDMVVLSG
AHTFGRARCTTFSNRLFNFTNGQPDPRINTAYLATLQQICPNGGNGSVVANFDPVTQDTFDNQYYANVLNGQGLLNSDAELLNGTTAALVSNFSTDQTSFFNNFAVSMVNMGNLQPLTGS
QGEIRSNCRKTN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns) and 4 ESTs (FE462457.1, FE482981.1). No prediction from JGI. Contigs also contains SmPrx05b and SmPrx06b
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGGCTACGAAGTACTTGCAACGGTGCTGCTTACAATCCTTTTCCGGCGATCCGTCGCTCAGCTCAGTCCCTCTTTCTACAACTCGTCTTGCCCCACCGTAGAGACCGTCGTGACA
AATACTCTCCAGCAGGCAATGCAGAGCGATGTTCGAATTGCTGCCTCGCTTCTCCGGGTGCATTTCCACGACTGCTTCGTAAATATGTAAGTATTGAATTTAATTTCTCTCCTTTTGTTC
CAGAATTCCTCTGTCTCCTTCTGACTCGTCCTCTGCCTCCCGCAGGGCTGCGACGCGTCAGTTCTCCTGGACGACACTGCGAATTTCACAGGAGAGAAAACGGCAGCTCCAAACAACGCC
TCGCTCCGAGGCTTCGATGTCATCGACCAGATGAAGTCGCAGGTTGACAGCGTCTGCAACAACACCGTCTCCTGTGCCGACATCCTCGCCATCGCAGCCAAGGCGGCAGTAGTCCTGTGG
TCAGTACTCTAACCCGAATCCATTTCGCGAAATCACAAACTCTTAACCCCCGCACCTTCTCTTCTTTCTTTTTCCCAGAGCGGAGGACCATCCTGGACGGTCCAGCTGGGAAGGCGAGAC
AGCACCACAGCAAACTTCTCCCTCGCGCAGGCCAACATCCCGCCGCCAACATCCACGAACGCTCAGCTCATTGCGGCGTACCAGAATGTGGGGCTCTCGACGCAGGACATGGTGGTCTTG
TCCGGCGCGCACACCTTCGGCCGGGCTCGCTGCACCACTTTCTCCAACAGGCTCTTCAACTTCACCAACGGGCAGCCCGATCCCCGGATCAACACAGCGTACCTGGCGACCCTCCAGCAG
ATCTGTCCCAACGGGGGCAACGGCAGCGTAGTGGCCAACTTCGACCCCGTCACCCAGGACACTTTCGACAACCAGTACTACGCCAATGTGCTCAATGGCCAGGGCCTGCTCAACTCGGAC
GCCGAGCTCCTCAACGGCACCACCGCGGCGCTTGTCAGCAACTTCAGCACCGATCAGACGAGCTTCTTCAACAATTTCGCGGTGTCCATGGTGAACATGGGGAATTTGCAGCCGCTCACC
GGCAGCCAGGGCGAGATCCGGAGCAACTGCAGGAAAACCAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGGCTACGAAGTACTTGCAACGGTGCTGCTTACAATCCTTTTCCGGCGATCCGTCGCTCAGCTCAGTCCCTCTTTCTACAACTCGTCTTGCCCCACCGTAGAGACCGTCGTGACA
AATACTCTCCAGCAGGCAATGCAGAGCGATGTTCGAATTGCTGCCTCGCTTCTCCGGGTGCATTTCCACGACTGCTTCGTAAATGGCTGCGACGCGTCAGTTCTCCTGGACGACACTGCG
AATTTCACAGGAGAGAAAACGGCAGCTCCAAACAACGCCTCGCTCCGAGGCTTCGATGTCATCGACCAGATGAAGTCGCAGGTTGACAGCGTCTGCAACAACACCGTCTCCTGTGCCGAC
ATCCTCGCCATCGCAGCCAAGGCGGCAGTAGTCCTGAGCGGAGGACCATCCTGGACGGTCCAGCTGGGAAGGCGAGACAGCACCACAGCAAACTTCTCCCTCGCGCAGGCCAACATCCCG
CCGCCAACATCCACGAACGCTCAGCTCATTGCGGCGTACCAGAATGTGGGGCTCTCGACGCAGGACATGGTGGTCTTGTCCGGCGCGCACACCTTCGGCCGGGCTCGCTGCACCACTTTC
TCCAACAGGCTCTTCAACTTCACCAACGGGCAGCCCGATCCCCGGATCAACACAGCGTACCTGGCGACCCTCCAGCAGATCTGTCCCAACGGGGGCAACGGCAGCGTAGTGGCCAACTTC
GACCCCGTCACCCAGGACACTTTCGACAACCAGTACTACGCCAATGTGCTCAATGGCCAGGGCCTGCTCAACTCGGACGCCGAGCTCCTCAACGGCACCACCGCGGCGCTTGTCAGCAAC
TTCAGCACCGATCAGACGAGCTTCTTCAACAATTTCGCGGTGTCCATGGTGAACATGGGGAATTTGCAGCCGCTCACCGGCAGCCAGGGCGAGATCCGGAGCAACTGCAGGAAAACCAAC
TGA

Retrieve as FASTA