1. Browse the Database
  2. View Redoxidase
Entry information : SmPrx20-2_67 (SmPrx20b_67)
Entry ID 7008
Creation 2009-10-07 (Christophe Dunand)
Last sequence changes 2009-10-07 (Christophe Dunand)
Sequence status complete
Reviewer Paula Nunes
Last annotation changes 2009-12-14 (Paula Nunes)
Peroxidase information: SmPrx20-2_67 (SmPrx20b_67)
Name (synonym) SmPrx20-2_67 (SmPrx20b_67)
Class Class III peroxidase    [Orthogroup: Prx342]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx20-2_67
start..stop		 S start..stop
SmPrx20-1_79 650 0 1..325 1..324
SmPrx80-2_66 323 9.11e-111 10..323 11..321
SmPrx80-1_13 320 2.18e-109 10..323 17..327
CsPrx20 294 4.31e-99 1..323 6..326
Literature and cross-references SmPrx20-2_67 (SmPrx20b_67)
DNA ref. JGI genome:   Scaffold_67 (55052..56183)
mRNA ref. JGI transcript:   122262 [Incorrect splicing]
Protein sequence: SmPrx20-2_67 (SmPrx20b_67)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (306)
PWM (Da):   %s   35228.87 (33175.7)  
PI (pH):   %s   6.62 (6.24) Peptide Signal:   %s   cut: 20 range:20-325
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRFLAVLIAI AVIFPSSSHQ FWPGFYDSSC PGLASIVAQV SLRRFQQLTN HPAQVLRLFF HDCFVEGCDG SILIGQTPQS SVERDSVANR DLVQDAFDTI DLAKQAVEAQ CPGVVSCADI  LAMVTRDMLI LAAGGPGWNL ALGRRDGTVS RADSALREIP SPRSGLDELL KNFHSKGLNL LDLVTLSGSH TLGVSHCSQF SQRLYGVNTS LDGTDPSLDP SFAKELKKDC PPGAPVTAIE 
FFDKAAPFTF DNHYFKNLEA GRSLLTSDES LLASFPSREI VRLFARDPPL FFFSFAASMD KLSRLGVKTG GAGEIRRSCN RFNAQ 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). Incorrect transcript prediction from JGI (error splicing intron 2). No EST.