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Entry information : SmPrx17-1_0 (SmPrx17a_0)
Entry ID 7016
Creation 2009-10-07 (Paula Nunes)
Last sequence changes 2011-02-02 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-08-12 (Christophe Dunand)
Peroxidase information: SmPrx17-1_0 (SmPrx17a_0)
Name (synonym) SmPrx17-1_0 (SmPrx17a_0)
Class Class III peroxidase     [Orthogroup: Prx027]*
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx17-1_0
start..stop		 S start..stop
SmPrx[P]17b10_8 386 5.91e-136 138..323 98..283
SmPrx[P]17b10_8 82 4.32e-18 1..38 1..38
SmPrx54-1_5 370 7.51e-129 4..323 1..329
SmPrx54-2_1 369 8.84e-129 4..323 1..329
PabPrx86 362 1.19e-125 12..323 6..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7016' 'join(5004853..5005068,5005194..5005388,5005452..5005617,5005749..5006143)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5004853..5005068 214 N° 2 5005194..5005388 193 N° 3 5005452..5005617 164 N° 4 5005749..5006143 393
join(5004853..5005068,5005194..5005388,5005452..5005617,5005749..5006143)


exon

Literature and cross-references SmPrx17-1_0 (SmPrx17a_0)
DNA ref. JGI genome:   scaffold_0 (5005086..5006373)
mRNA ref. JGI transcript:   164271
EST ref. GenBank:   FE450206.1 [5' end]
Protein sequence: SmPrx17-1_0 (SmPrx17a_0)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (298)
PWM (Da):   %s   35109.84 (32392.4)  
PI (pH):   %s   9 (9.29) Peptide Signal:   %s   cut: 26 range:26-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MERIKGSTCLVLMLVAVIMVDLCQAQLSTTFYSKSCPRVKAIVKD
AMQKKFSETRVVAAGTLRLFFHDCMIEGCDGSVIIASTNTNKAEKDADDNLSLPGDAFDAVFRAKAAVEKQCPNTVSCADILTMATSELLQLIGGRGWDVRLGRKDGRVSLASRVPGNLPNVNMSVAQLTSFFKTRGFSQRELVVLSGGHSAGFAHCNKFMDRIYGRIDPTMDTGYARGLRGTCPQRNLDPTVVANLDTTTSTTFDNVFYQNLKSKKGLLRSDQVLYTDPNTKKVVDSFASDNTAFLIEFAAVMDKLSAFKVKTGSQ
GEIRKNCGVIN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and ESTs
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAGAATCAAAGGATCTACTTGCCTGGTCTTGATGCTTGTCGCCGTGATAATGGTTGATCTGTGCCAAGCCCAGCTCTCCACCACTTTCTACTCCAAATCCTGCCCGAGAGTAAAG
GCTATTGTCAAGGACGCAATGCAGAAGAAGTTCAGCGAGACCAGAGTTGTAGCCGCTGGAACACTCCGACTTTTCTTCCACGATTGCATGATAGAGAGGTCTGCTCCCAATTTCCAGTTC
CTGGATTGTTCCTCTCAGCCCCGATTGTTCCTCCACTTGAATTTCCCAAGCTTTGCCTGCTGAATTGTTTAATTGCCGATAGCTGACCACAACTCCTGTCCAGGGATGCGATGGTTCAGT
CATAATTGCCTCTACGAACACGAACAAAGCCGAGAAGGACGCAGACGACAATCTTTCGCTTCCTGGAGATGCCTTCGACGCTGTTTTCAGAGCTAAAGCCGCAGTCGAGAAGCAATGCCC
GAACACAGTCTCCTGTGCTGACATCCTCACCATGGCCACCAGCGAACTTCTCCAGCTCTCGTAAGCATCAATCGATAAGTATACCGGCATCGCCTCACTGACACTTTCCCCTGTGCTTCA
AAGATTGGAGGACGCGGCTGGGATGTAAGGCTTGGAAGAAAAGACGGCAGAGTGTCACTAGCTTCGAGAGTTCCCGGGAATTTGCCGAACGTAAACATGTCAGTTGCTCAGCTCACTTCA
TTCTTTAAAACTCGAGGATTCAGCCAAAGAGAATTGGTCGTCTTGTCCGCGGTAAGTTTTTGAAAACCGCCCCTGTGACCCTGTTAAATTCCCCTGTCCCGTGTTACGCATCTTCGATCA
TGCCTGTTCCTGATTTTCCTGTTCCTCCTTGTTTCCCTGACCAATTTTCCTCCACTGAGCAGGAGGCCACAGTGCTGGTTTTGCTCACTGCAACAAGTTCATGGACCGGATTTATGGCAG
AATTGATCCAACCATGGATACCGGTTACGCCAGGGGTCTCAGAGGTACATGTCCCCAAAGGAATCTGGACCCGACTGTCGTTGCCAATCTCGACACCACCACTTCCACCACGTTTGACAA
TGTCTTCTACCAAAACCTCAAGAGCAAAAAGGGCCTTCTCCGCTCCGATCAAGTGCTATACACCGACCCGAACACTAAGAAAGTCGTGGACTCGTTTGCCTCCGACAACACTGCCTTTCT
CATTGAGTTCGCCGCGGTCATGGACAAGTTGAGTGCCTTCAAGGTAAAGACAGGCTCTCAAGGTGAAATCCGGAAAAACTGCGGGGTGATCAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAGAATCAAAGGATCTACTTGCCTGGTCTTGATGCTTGTCGCCGTGATAATGGTTGATCTGTGCCAAGCCCAGCTCTCCACCACTTTCTACTCCAAATCCTGCCCGAGAGTAAAG
GCTATTGTCAAGGACGCAATGCAGAAGAAGTTCAGCGAGACCAGAGTTGTAGCCGCTGGAACACTCCGACTTTTCTTCCACGATTGCATGATAGAGGGATGCGATGGTTCAGTCATAATT
GCCTCTACGAACACGAACAAAGCCGAGAAGGACGCAGACGACAATCTTTCGCTTCCTGGAGATGCCTTCGACGCTGTTTTCAGAGCTAAAGCCGCAGTCGAGAAGCAATGCCCGAACACA
GTCTCCTGTGCTGACATCCTCACCATGGCCACCAGCGAACTTCTCCAGCTCATTGGAGGACGCGGCTGGGATGTAAGGCTTGGAAGAAAAGACGGCAGAGTGTCACTAGCTTCGAGAGTT
CCCGGGAATTTGCCGAACGTAAACATGTCAGTTGCTCAGCTCACTTCATTCTTTAAAACTCGAGGATTCAGCCAAAGAGAATTGGTCGTCTTGTCCGGAGGCCACAGTGCTGGTTTTGCT
CACTGCAACAAGTTCATGGACCGGATTTATGGCAGAATTGATCCAACCATGGATACCGGTTACGCCAGGGGTCTCAGAGGTACATGTCCCCAAAGGAATCTGGACCCGACTGTCGTTGCC
AATCTCGACACCACCACTTCCACCACGTTTGACAATGTCTTCTACCAAAACCTCAAGAGCAAAAAGGGCCTTCTCCGCTCCGATCAAGTGCTATACACCGACCCGAACACTAAGAAAGTC
GTGGACTCGTTTGCCTCCGACAACACTGCCTTTCTCATTGAGTTCGCCGCGGTCATGGACAAGTTGAGTGCCTTCAAGGTAAAGACAGGCTCTCAAGGTGAAATCCGGAAAAACTGCGGG
GTGATCAATTAG

Retrieve as FASTA