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Entry information : SmPrx74-2_39 (SmPrx74b_39)
Entry ID 7055
Creation 2009-10-19 (Christophe Dunand)
Last sequence changes 2009-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx74-2_39 (SmPrx74b_39)
Name (synonym) SmPrx74-2_39 (SmPrx74b_39)
Class Class III peroxidase    [Orthogroup: Prx069]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx74-2_39
start..stop		 S start..stop
SmPrx74-1_88 656 0 1..329 1..329
SmPrx50-1_126 460 1.33e-164 13..329 8..327
SmPrx50-2_101 458 7.25e-164 13..329 8..327
SmPrx36-2_44 398 2.28e-139 11..329 55..375
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7055' 'join(189906..190322,190529..191101)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 189906..190322 415 N° 2 190529..191101 571  
join(189906..190322,190529..191101)


exon

Literature and cross-references SmPrx74-2_39 (SmPrx74b_39)
DNA ref. Phytozome 12:   scaffold_39 (189906..191101)
mRNA ref. JGI transcript:   418626
Protein sequence: SmPrx74-2_39 (SmPrx74b_39)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (301)
PWM (Da):   %s   34927.4 (31944.0) Transmb domain:   %s   i13-35o
PI (pH):   %s   8.42 (8.40) Peptide Signal:   %s   cut: 29 range:29-329
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKSCSSSPFQSLIIFLFLVSMCGMAFGQLSTTFYASTCPNLVQI
VSGVVRRAVASEPRMAASLLRLHFHDCFVQGCDASLLLDDASGFTGEKSALPNQNSVRGFNVIDNIKTAVERQCP
NVVSCADIVTLAAREGVTALQGPSWPVVLGRRDSTTASLSSANNDIPAPTSSASQLLSKFQAKGLSAQDLVATSGGHTIGQARCVTFRDRLYNFSSSGRPDPNLNALFLSRLQQQCTQSS
ASDNSLSPLDVRSANVFDNAYFVNLQFNRGLLNSDQVLSAGSTQALVNAYAGNNRRFFADFASAMVNMGNISPLTGSAGEIRKSCRARN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 2). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGAGTTGCTCTTCATCTCCATTCCAAAGCTTGATCATCTTCCTCTTTCTAGTATCGATGTGTGGAATGGCTTTTGGTCAGCTAAGCACCACATTCTATGCCTCGACTTGCCCA
AACCTGGTCCAGATCGTGAGCGGAGTCGTGAGGCGAGCAGTGGCGAGCGAGCCTCGTATGGCGGCCTCGCTCCTTCGGCTACACTTTCATGATTGTTTCGTCCAGGGCTGCGACGCATCT
CTGCTGCTCGACGACGCCTCGGGATTCACCGGGGAGAAATCCGCGCTTCCCAATCAAAACTCTGTGCGCGGATTCAATGTCATTGACAACATCAAGACCGCAGTGGAGAGGCAGTGTCCC
AACGTCGTCTCGTGCGCTGATATTGTCACGCTCGCAGCTAGAGAAGGCGTCACAGCGCGGTAAGAGATCGAGTGGCCTCCTTGCTTCAATGTTTTCATGGGGTGTTCTAGTGTGGTATTC
TTCCTTACGCTTAAGCTCTAGCTAGTGTTCTAGCTTTCTCGCTTCTTTCTCTTGTTCCTTGAAGCTCTCGACTTGATATTCCTTGATCTTCCTGTTTCCTTGACTATAGATCTCAATGCT
AATGGTTGTGATCCGTGCTATGTAGTTGCAAGGCCCATCTTGGCCCGTGGTTTTGGGACGCAGAGACAGCACCACCGCAAGCCTCTCTTCCGCAAACAACGATATCCCAGCGCCAACATC
CAGCGCCTCGCAGCTCCTCTCCAAGTTCCAAGCCAAGGGACTGTCCGCCCAGGACCTGGTAGCAACATCCGGCGGCCACACAATCGGCCAGGCACGCTGCGTCACCTTTCGGGACCGCCT
CTACAACTTTAGCAGCTCGGGCCGCCCGGATCCAAACCTCAACGCGCTCTTCCTCTCGCGCCTGCAGCAGCAGTGCACGCAATCCTCCGCCTCGGACAACAGCCTCTCGCCCCTCGACGT
GAGGAGTGCCAACGTTTTCGACAACGCTTACTTTGTCAACCTGCAGTTCAACAGGGGGCTCCTCAACTCGGACCAGGTGCTGTCCGCTGGCAGCACGCAGGCCCTGGTGAACGCATACGC
GGGCAACAACCGACGCTTCTTTGCGGACTTTGCGTCAGCTATGGTGAATATGGGCAACATTAGTCCTCTCACCGGCAGCGCGGGCGAGATCCGGAAGAGCTGCCGTGCCAGAAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGAGTTGCTCTTCATCTCCATTCCAAAGCTTGATCATCTTCCTCTTTCTAGTATCGATGTGTGGAATGGCTTTTGGTCAGCTAAGCACCACATTCTATGCCTCGACTTGCCCA
AACCTGGTCCAGATCGTGAGCGGAGTCGTGAGGCGAGCAGTGGCGAGCGAGCCTCGTATGGCGGCCTCGCTCCTTCGGCTACACTTTCATGATTGTTTCGTCCAGGGCTGCGACGCATCT
CTGCTGCTCGACGACGCCTCGGGATTCACCGGGGAGAAATCCGCGCTTCCCAATCAAAACTCTGTGCGCGGATTCAATGTCATTGACAACATCAAGACCGCAGTGGAGAGGCAGTGTCCC
AACGTCGTCTCGTGCGCTGATATTGTCACGCTCGCAGCTAGAGAAGGCGTCACAGCGTTGCAAGGCCCATCTTGGCCCGTGGTTTTGGGACGCAGAGACAGCACCACCGCAAGCCTCTCT
TCCGCAAACAACGATATCCCAGCGCCAACATCCAGCGCCTCGCAGCTCCTCTCCAAGTTCCAAGCCAAGGGACTGTCCGCCCAGGACCTGGTAGCAACATCCGGCGGCCACACAATCGGC
CAGGCACGCTGCGTCACCTTTCGGGACCGCCTCTACAACTTTAGCAGCTCGGGCCGCCCGGATCCAAACCTCAACGCGCTCTTCCTCTCGCGCCTGCAGCAGCAGTGCACGCAATCCTCC
GCCTCGGACAACAGCCTCTCGCCCCTCGACGTGAGGAGTGCCAACGTTTTCGACAACGCTTACTTTGTCAACCTGCAGTTCAACAGGGGGCTCCTCAACTCGGACCAGGTGCTGTCCGCT
GGCAGCACGCAGGCCCTGGTGAACGCATACGCGGGCAACAACCGACGCTTCTTTGCGGACTTTGCGTCAGCTATGGTGAATATGGGCAACATTAGTCCTCTCACCGGCAGCGCGGGCGAG
ATCCGGAAGAGCTGCCGTGCCAGAAACTAA

Retrieve as FASTA