1. Browse the Database
  2. View Redoxidase
Entry information : SmPrx64-2_18 (SmPrx64b_18)
Entry ID 7096
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2011-01-26 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-26 (Toky Ramarohetra)
Peroxidase information: SmPrx64-2_18 (SmPrx64b_18)
Name (synonym) SmPrx64-2_18 (SmPrx64b_18)
Class Class III peroxidase    [Orthogroup: Prx095]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx64-2_18
start..stop		 S start..stop
SmPrx63-2_18 644 0 40..359 1..320
SmPrx64-1_19 593 0 40..359 1..322
SmPrx63-1_19 548 0 40..359 1..308
SmPrx102-1_50 506 0 40..359 1..314
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7096' 'join(941973..942338,942392..942562,942623..943165)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 941973..942338 364 N° 2 942392..942562 169 N° 3 942623..943165 541  
join(941973..942338,942392..942562,942623..943165)


exon

Literature and cross-references SmPrx64-2_18 (SmPrx64b_18)
DNA ref. Phytozome 12:   scaffold_18 (941973..943165)
mRNA ref. JGI transcript:   14687 [Incorrect prediction]
Protein sequence: SmPrx64-2_18 (SmPrx64b_18)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359
PWM (Da):   %s   38788.15 Transmb domain:   %s   i7-29o
PI (pH):   %s   9.13
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MCSIFLLFLESHPEKLVLVLGQEAKLLFTPSLPRERKITMQQFKYLAPLTSAALLLALTLLRRYAIHQESPTTPSELSTSFYANTCPNFPQIARSVIRFEVANDSRSSASILKLHFRDCF
AQGCDGSLLPQVGKERGDGRSTKGLKIINNIKRAVETSCPETVSCADILALSARESVIALGGPSWTVEFGRRDNPSSASVAAAVDAIPSPNLTATQLIESFQKRGLSKRDLVALSGGHSI
GQAQCSTFSARLFNGTAGDSIDPALKSRLEKTCPPTALNRLNNLDPSPTTFDNLYFRAVQANQSLLFSDQQLLQSDLAGFVKEFANNQKAFFTAFANAMIKIGKLSPLTGGHGEIRASC*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST. Incorrect prediction from JGI (short PS).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGTTCTATTTTCTTGCTGTTTCTTGAAAGCCATCCAGAGAAGCTTGTTCTTGTTCTGGGCCAAGAGGCCAAGCTTCTCTTCACACCTTCACTCCCTCGTGAAAGAAAGATCACAATG
CAGCAATTTAAATATCTAGCTCCACTCACCTCAGCAGCATTACTCCTCGCGTTAACGCTGCTGCGGCGCTATGCAATTCACCAGGAATCACCAACAACGCCCTCGGAGCTCTCCACTTCT
TTCTACGCTAATACTTGTCCCAACTTCCCCCAGATCGCTAGAAGCGTGATTCGCTTTGAAGTTGCCAATGACAGCCGATCCTCTGCATCCATCCTCAAGCTCCACTTCCGCGATTGCTTT
GCTCAAAAGTAAGTACTCTAATAATAAGTCCTCGTTTGTCATTTATTTGGCTGTCGCTCAGGGCTGTGACGGATCGCTGCTCCCCCAGGTCGGGAAGGAGCGAGGAGACGGACGCTCCAC
CAAGGGACTCAAAATCATCAACAATATCAAACGCGCCGTGGAGACCTCATGCCCGGAAACTGTATCATGCGCGGACATTCTTGCTCTGAGCGCCCGGGAATCCGTCATAGCCCCGTAAGT
GAGGTCTCCATTGATTTGAGTTACAAATGCTTTCTTCTCTTTCGAAATTTGCAGCTTGGTGGCCCGTCATGGACAGTAGAGTTTGGCCGACGGGACAATCCCAGCTCCGCGAGCGTCGCT
GCCGCGGTGGACGCCATTCCCAGCCCAAATCTCACCGCAACGCAGCTGATTGAGAGCTTCCAAAAGCGGGGCCTTTCCAAGCGTGATCTCGTAGCGCTCTCAGGAGGCCATTCCATCGGC
CAGGCCCAGTGCTCCACATTTAGCGCCCGCCTCTTCAACGGAACCGCAGGGGATAGCATCGATCCGGCCCTCAAGTCCCGACTCGAGAAGACTTGCCCTCCAACAGCCCTAAACAGATTG
AACAATTTGGATCCCTCCCCCACCACGTTCGACAACTTATACTTTCGAGCCGTCCAAGCGAATCAGTCACTCCTCTTCTCAGACCAGCAGCTCTTGCAGAGTGATCTGGCGGGCTTTGTC
AAGGAGTTTGCGAACAACCAGAAGGCATTTTTTACCGCCTTCGCCAATGCCATGATCAAAATTGGTAAGCTCTCGCCTCTCACGGGAGGACATGGTGAAATTCGAGCGTCGTGCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGTTCTATTTTCTTGCTGTTTCTTGAAAGCCATCCAGAGAAGCTTGTTCTTGTTCTGGGCCAAGAGGCCAAGCTTCTCTTCACACCTTCACTCCCTCGTGAAAGAAAGATCACAATG
CAGCAATTTAAATATCTAGCTCCACTCACCTCAGCAGCATTACTCCTCGCGTTAACGCTGCTGCGGCGCTATGCAATTCACCAGGAATCACCAACAACGCCCTCGGAGCTCTCCACTTCT
TTCTACGCTAATACTTGTCCCAACTTCCCCCAGATCGCTAGAAGCGTGATTCGCTTTGAAGTTGCCAATGACAGCCGATCCTCTGCATCCATCCTCAAGCTCCACTTCCGCGATTGCTTT
GCTCAAGGCTGTGACGGATCGCTGCTCCCCCAGGTCGGGAAGGAGCGAGGAGACGGACGCTCCACCAAGGGACTCAAAATCATCAACAATATCAAACGCGCCGTGGAGACCTCATGCCCG
GAAACTGTATCATGCGCGGACATTCTTGCTCTGAGCGCCCGGGAATCCGTCATAGCCCTTGGTGGCCCGTCATGGACAGTAGAGTTTGGCCGACGGGACAATCCCAGCTCCGCGAGCGTC
GCTGCCGCGGTGGACGCCATTCCCAGCCCAAATCTCACCGCAACGCAGCTGATTGAGAGCTTCCAAAAGCGGGGCCTTTCCAAGCGTGATCTCGTAGCGCTCTCAGGAGGCCATTCCATC
GGCCAGGCCCAGTGCTCCACATTTAGCGCCCGCCTCTTCAACGGAACCGCAGGGGATAGCATCGATCCGGCCCTCAAGTCCCGACTCGAGAAGACTTGCCCTCCAACAGCCCTAAACAGA
TTGAACAATTTGGATCCCTCCCCCACCACGTTCGACAACTTATACTTTCGAGCCGTCCAAGCGAATCAGTCACTCCTCTTCTCAGACCAGCAGCTCTTGCAGAGTGATCTGGCGGGCTTT
GTCAAGGAGTTTGCGAACAACCAGAAGGCATTTTTTACCGCCTTCGCCAATGCCATGATCAAAATTGGTAAGCTCTCGCCTCTCACGGGAGGACATGGTGAAATTCGAGCGTCGTGCTAG

Retrieve as FASTA