Entry information : SmPrx41-2_71 (SmPrx41b_71)
Entry ID | 7141 |
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Creation | 2009-11-18 (Paula Nunes) |
Last sequence changes | 2009-11-18 (Paula Nunes) |
Sequence status | complete |
Reviewer | Christophe Dunand |
Last annotation changes | 2011-01-25 (Toky Ramarohetra (Scipio)) |
Peroxidase information: SmPrx41-2_71 (SmPrx41b_71)
Name (synonym) | SmPrx41-2_71 (SmPrx41b_71) | ||||||||||||||||||||||||||||||||||||
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Class | Class III peroxidase [Orthogroup: Prx348] | ||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella | ||||||||||||||||||||||||||||||||||||
Organism | Selaginella moellendorffii [TaxId: 88036 ] | ||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue type | N/D |
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Inducer | N/D |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7141' 'complement(join(147731..148107,148170..148329,148379..148558,148615..148908))' |
Exons►
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Literature and cross-references SmPrx41-2_71 (SmPrx41b_71)
DNA ref. | Phytozome 12: scaffold_71 (148908..147731) |
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mRNA ref. | JGI transcript: 123452 [Incorrect splicing] |
EST ref. | GenBank: FE432796.1 [5' end] FE498985.1 [3' end] |
Cluster/Prediction ref. | UniGene: Smo.8080 [3' end] |
Protein sequence: SmPrx41-2_71 (SmPrx41b_71)
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (3 introns). Incorrect prediction from JGI: prediction of exons 1 (short PS) and 2 of the SmPr41b, exon 3 of SmPrx40b and exon 4 of SmPrx39b. 4 ESTs (FE454280.1 and FE432795.1 ==>3'end). | ||||||||||||
DNA ► Send to BLAST |
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CDS► Send to BLAST |
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