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Entry information : PedPrx03
Entry ID 7161
Creation 2010-01-22 (Cyril Jourda)
Last sequence changes 2010-01-22 (Cyril Jourda)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-02-16 (Christophe Dunand)
Peroxidase information: PedPrx03
Name PedPrx03
Class Class III peroxidase     [Orthogroup: Prx067]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Phyllostachys
Organism Phyllostachys edulis    [TaxId: 38705 ]
Cellular localisation N/D
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PedPrx03
start..stop		 S start..stop
PedPrx02 559 0 10..280 72..342
PedPrx01 523 0 10..280 72..342
TaPrx06-1D 483 3.48e-174 10..280 69..339
HvPrx59 481 3.34e-173 10..280 70..340
Literature and cross-references PedPrx03
Literature REFERENCE 1. Jiang,Z.H., Li,J.Y., Peng,Z.H., Li,L.B., Hu,T., Liu,X.H., Lu,T.T.,Yu,S.L., Li,Y., Feng,Q., Fan,D.L., Wen,Q.J., Mu,J., Guan,J.P. and Han,B. Unpublished
mRNA ref. GenBank:   FP101115
Protein sequence: PedPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   280 (290)
PWM (Da):   %s   30565.35 (31573.8)  
PI (pH):   %s   6.28 (6.98) Peptide Signal:   %s   cut: 31 range:31-320
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHAWCIYVCM QGCDASVLLD PTPANPHTEK TAPINIGLAA FDLIDEIKEA VEERCPGTVS CSDTLIYAGR DASSILSNGH VHFDVLAGRL DGVASYAAEA QRDLPDSTFT IQELIHNFRR  KNFTVEELVI LSGAHSIGVG HCSSLRARLS APADQILPSY RNLLTGKCAA GPNPVVPNNV RDEDPAAVAA AMPGFLGKLR KVKDFLDNSY YHNNLARIVT FNSDWQLLTE KEALGHVKEY 
AENGTLWDED FSDALVKLSK LRMPHGGKGE IRKHCRFVNH 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. First exon is missing. No EST.
cDNA►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTACTAC GGGTACTACC AACTGCTTGA TCGTTAGCTT AAGATAATCC TTAATTAACA CAGGCATGCA CGCATGGTGC ATATACGTAT GTATGCAGGG TTGCGACGCC TCCGTGCTGC  TTGACCCGAC TCCGGCGAAC CCGCACACGG AGAAGACGGC GCCGATCAAC ATCGGGCTCG CGGCGTTCGA CCTGATCGAC GAGATCAAGG AGGCGGTGGA GGAGCGGTGC CCCGGCACGG  TGTCCTGCTC CGACACGCTC ATCTACGCGG GCCGCGACGC GTCCAGCATC CTGAGCAACG GGCACGTCCA CTTCGACGTG CTGGCGGGGC GGCTGGACGG CGTCGCGTCG TACGCGGCGG  AGGCGCAGCG CGACCTCCCG GACTCGACGT TCACGATCCA GGAGCTGATC CACAACTTCC GGCGCAAGAA CTTCACGGTG GAGGAGCTGG TGATCCTGTC CGGCGCGCAC TCCATCGGCG  TCGGCCACTG CTCCTCCCTC CGCGCGCGGC TGAGCGCCCC AGCCGACCAG ATCCTCCCAT CCTACCGGAA CCTCCTCACC GGCAAGTGCG CGGCGGGGCC GAACCCCGTG GTGCCGAACA  ACGTGCGCGA CGAGGACCCG GCGGCGGTGG CGGCGGCGAT GCCGGGGTTC CTGGGGAAGC TGCGCAAGGT GAAGGACTTC CTGGACAACA GCTACTACCA CAACAACCTG GCGCGGATCG  TGACGTTCAA CTCGGACTGG CAGCTGCTGA CGGAGAAGGA GGCGCTGGGG CACGTGAAGG AGTACGCGGA GAACGGGACC CTGTGGGACG AGGACTTCTC CGACGCGCTC GTCAAGCTCA  GCAAGCTGCG CATGCCGCAC GGCGGCAAGG GCGAGATCAG GAAGCACTGC CGCTTCGTCA ACCACTAGCA GCTGGATCGC GACAAGGACG TTCGGATTCT AAGGCTAGCT TACTTATGGG  TGGATTTGCA TCGCGTTTGA TTATTCTTTC GGTTAATTTG TCGGTTCATT CGTCGCTTGC TACTACATTT TCTGTGTTGT TGGTTTCAGC CGTACGTTTG CGTCAATTGG CCGGCATGCA 
ACGTTCAGTT GTTGTCTCGC TTGGCTTGGA TATCCCATAT ATCCAATGGT CATCATGTAA TAAGGATGAA AGAAATGAAG TAAATTGCAC TGTCACGTTC 

Retrieve as FASTA