Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
330 (300) |
| PWM (Da): |
37185.49 (33630.6) |
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| PI (pH): |
6.39 (5.60) |
Peptide Signal: |
cut: 31 range:31-330 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDNNHNHFSL SSRFLLLLLP LLLHIHHVRS ELQLNYYLES CPRAEEIIKE QVAQLYHKHG NTAVSWIRNL FHDCMVKSCD ASIYLDTANG QESEKTSPKN FGMRNFKYVE TIKQALESEC
PNTVSCADIV ALSARDGLLW LGGPRVEMRT GRKDSKESYL AEVESSLPNH NDSMSSVLSR FQSIGVDTEG TVALFGAHSV GRVHCVNLVH RLYPTVDPTL DPDYAKYLKG RCPTPNPDPE
AVLYSRNDRE TTMILDNMYY KNILNHKGLL IVDQELVTDS TTSPFVEKMA ADNGYFHDQF ARALLILSEN NPLTGDQGEI RKVCRYVNSA
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and ESTs (FS407980.1, FS387436.1, FS378901.1, AM835462.1, FS403468.1, FS429390.1). Uncorrect prediction from SGN (start of PS is not predicted). Unigene compiles ESTs from both alleles. Cultivar="K326", "SNN" |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACAACA ACCACAATCA TTTCAGTCTC TCCTCAAGAT TTCTCCTTCT GTTATTACCA CTACTTCTTC ACATTCACCA TGGTAATTAA TTCTCCACTT ATATTTAAAT TTTATGACTT
CTTCTACTTT TTTCAGATAT TGACTAACTT CTTGATAAAG TATAATTGTG TTTTAAGTTA TGTTGCGTGC ACTCTCTAAA ATAATGTCGC ATCCGTATCG GATCCTCCAA AAATACATTA
CTTTTAAAGG ACCCGACACA CACCCGTCGA CAACATTTTC GGAGATTCCG ATCAACAATA AGTTTTAAGT TGGGAGATAC TCAATCTTAG CACTAAAATA TTGTTTTCAA ATTTATATTA
GCGTAACCAA ATTTTACACT ATTTGTGCAA TTTAACATGT TATTGCACGT TATTTACTGT ATTTTTCATG TTATCTACTT AACCACCAGT TCAAACATAT CATGCTTGTT ATAAAAAGTT
ATTACATGTT ATTGTATGCA ACTTAACCCG TTGGTGTAAC ATATTATATA TATACACTAT CATTGCAAAG AACTTAAATT CTATACTATA GAAGAAATTA TTTGAGGGCG GATATAGCAT
GCGGCGAGCG GTGTAACGTG ACACCGCTTC GTCGGAATTT TTATTAAATA TATATATATA TATAAATAGC ATACAAAATA AAAATATTGG ATATAAATAT AAAAAATAAT ACCACTTTTC
ATTATAGTGA TTTATTTATT CATTCATTTT TTTAAATTTT GACATCGCTT ACCAAATATC CCGGGTACGC CCCTGAAACT ATTAGTAGTC TATTTCACTT CTTTTCCCTA GTAATAAAGA
ATAACATCTA TAATTGTACA TATGTACTAA TTGCTGGGTT TTAATTGCAG TAAGAAGTGA ACTCCAATTG AACTACTACT TAGAGAGTTG CCCAAGAGCT GAAGAAATAA TCAAAGAACA
AGTGGCACAG TTGTACCACA AGCATGGCAA TACAGCAGTT TCTTGGATTA GAAATCTCTT TCATGATTGC ATGGTTAAGG TAATATTAAT TAATACTCTT AATTCTCCAA TTAAAAGTAA
ATTAATAACA CTGCTAGCTA CAACATTATA CAACAACAAT AATAAACTGA GTGAAATTTC ATAAGTGGGG TCGGATGATA GCAGTGTATA TGTAGACCTT ACCCCTACAT TGAAAAGGTA
AAGTGGTTGT TCCGGATAGA CCCTTAGCTC AAAAAAAGAT GAAAAGAAGC AGTAGCAATA GACAGTAACA ACAACAAGAT ACTAAAAAAA TTAAAGCGAA AAATAATACT CCCACCGTTT
TAGTTTAAAT GACATACTTT TCTTATTAGT CCATTTAAAA AAGACTGACA TATTTCTATA TTTGAAAATA ATTTAACTTT AAACTTCTCA TTTTACTCAC TTTACCCTTA ATGAGAAACT
TTTATAACCA TACAAATGCA TGTCCCCATA AAACTTTTAC CCCCTTAAGT TTGTGAACCA CATGTTTCAA AAATCTTTTT TTTTTCTTCC TTAAACTTGT GCCAAGTTAA ACTACATCAT
TTAAATTTAA ACGAAGGGAG TAAGAAAACA ACAGATAATA ATAGCTACAA CATTATGACC AATTTATATA TTAATATGTT TTTTTTCTTG CAGTCATGTG ATGCATCAAT ATATTTGGAC
ACAGCAAATG GACAGGAATC AGAGAAGACA TCTCCAAAAA ACTTTGGAAT GAGAAATTTT AAGTATGTAG AGACTATTAA ACAGGCACTT GAGAGTGAAT GTCCTAATAC TGTTTCTTGT
GCTGATATTG TTGCTCTTTC CGCCAGAGAT GGTCTTCTCT GGGTAAGTTG ATCAAATCCA CCTTCTTGTA CATCTCCCCT GATCCGGATA TAATATTGAT AGCGCAAAAT TATCTTATAC
TATCAGTATA TTTTAATTTG TTGAAATAGA GTTTTAGAGC AATAGTAAAG TTGTACTCAA CTTGAAAAAA AAAGAAACCT CAAGCCGATA AGTCATGGTG TTCGATAATT CGAAAGAAGA
GCTAAGGGCT GATCTACGAC CACCCTCTCA CTCACAGGAC ACATGCGATA TGTGTGATGC CGATACCCAG ATTTAGATAT CCACTTCAGA CTATTTACCT TATTTATGAT CTTCTTACGG
CCATCACGTT ATTCTATAAT TAAATATGCT ATTTATGCTA AAGATAGTCC TTCGTAGATC TCTACGAACA ATCTTAGACT GGCGTATTGA TAGTAGATGC TACCCACGCT GATGGTCGCT
TACCCAAACC CATCTATGTA TATACGCTTA TAGCTCACCT CCTCCCCCAT ACGACTCTCG ATGGTAGAAG AGAAAAGGAA CATATCTAAT GAGTCTTGAT TGCAATAGTA TAAGTTCGTA
TGACCTATAG ATCAAGGTTC GAGCTGTGAA AATAGTCACT AATACTTGCA TTAGTGTAGA CTGTCTATAC CACACACTCC TTGAGGTGCG TCCCTTCCTC GGATTTTGTG TGAATATCGG
ATATTTTGTG CAACGAACTG ACCTAATGTA TTTTAATACG TAACTATGAA AGCGATAACT TATAATTTAT TACTTTTCCA TTTTTCTTTC CCTTATAGAA TTGAGTCTAA TTTGTTTAAT
TTGTGTGATA CATAGTTGGG AGGGCCACGT GTTGAAATGA GAACAGGAAG GAAAGACAGC AAAGAAAGTT ACTTAGCAGA AGTTGAGAGT TCCCTTCCTA ATCACAATGA TTCCATGTCA
TCAGTCCTTT CTCGATTCCA ATCCATTGGT GTTGATACTG AAGGAACTGT TGCTCTTTTT GGTAAATCTC CCCTCTAATT AGCTGTTTAT TTTTTCAAAC TCCCAAGTTT AACACAAAAA
GTAAATGACT AAATTTTGTA TACTGACAAT TGTATTATAT GCTTATTTAA TTAAAAGTCA ATTAGTATAG TCGGACGGTG CTTGGATAAG TTTATAAGTT GGTTACTAAT TTATAAGTAT
TTTTTGACTT ATCTATACAT TTGTATCGTA GGTCAAAATC GGTCAAAAGT TCACTCTCAA TTTATGATTT TTATGCACTT TTAGTTTAAC TAAATTTTTT ACTATTATAT CCCTAATTTC
TTTTTTAATC TCCAAAATAC CTTTTCCAAA ATAAAAGATT GGACTCCCTT TCCATTTCAT TTCCGTCATT CTTTCCTTTT AATATAAAAA GACACTTTTA TATTTTTTTT TGCAAATAGC
TTTAATGGTA ATTTAGTAAT TTTAATAAAA ATACTTTTTA CCTACATCAT TGCAACTGCA TATGTTAAAC GATTTTATCC AAACTTGTAA CTACTTATTT ATCCAAACAG ACTTCTAATT
GTCTTATTTT ATGTGGATAC AGGGGCTCAC TCGGTAGGAC GAGTTCATTG TGTAAACCTA GTACACAGAC TTTATCCAAC AGTTGATCCT ACCCTTGACC CTGACTATGC TAAGTACCTT
AAAGGTCGAT GTCCGACACC GAATCCTGAC CCAGAGGCCG TTTTATACTC AAGGAATGAT CGCGAAACTA CAATGATCCT AGACAATATG TACTACAAAA ACATCTTGAA CCACAAGGGG
CTATTAATTG TAGATCAAGA ATTGGTTACT GATTCAACTA CTTCTCCATT TGTGGAAAAA ATGGCTGCTG ACAATGGCTA TTTCCATGAT CAATTTGCTC GGGCTTTGCT CATTTTGTCT
GAAAACAATC CACTTACTGG AGATCAAGGC GAGATTAGAA AAGTTTGCCG TTACGTAAAT AGTGCTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACAACA ACCACAATCA TTTCAGTCTC TCCTCAAGAT TTCTCCTTCT GTTATTACCA CTACTTCTTC ACATTCACCA TGTAAGAAGT GAACTCCAAT TGAACTACTA CTTAGAGAGT
TGCCCAAGAG CTGAAGAAAT AATCAAAGAA CAAGTGGCAC AGTTGTACCA CAAGCATGGC AATACAGCAG TTTCTTGGAT TAGAAATCTC TTTCATGATT GCATGGTTAA GTCATGTGAT
GCATCAATAT ATTTGGACAC AGCAAATGGA CAGGAATCAG AGAAGACATC TCCAAAAAAC TTTGGAATGA GAAATTTTAA GTATGTAGAG ACTATTAAAC AGGCACTTGA GAGTGAATGT
CCTAATACTG TTTCTTGTGC TGATATTGTT GCTCTTTCCG CCAGAGATGG TCTTCTCTGG TTGGGAGGGC CACGTGTTGA AATGAGAACA GGAAGGAAAG ACAGCAAAGA AAGTTACTTA
GCAGAAGTTG AGAGTTCCCT TCCTAATCAC AATGATTCCA TGTCATCAGT CCTTTCTCGA TTCCAATCCA TTGGTGTTGA TACTGAAGGA ACTGTTGCTC TTTTTGGGGC TCACTCGGTA
GGACGAGTTC ATTGTGTAAA CCTAGTACAC AGACTTTATC CAACAGTTGA TCCTACCCTT GACCCTGACT ATGCTAAGTA CCTTAAAGGT CGATGTCCGA CACCGAATCC TGACCCAGAG
GCCGTTTTAT ACTCAAGGAA TGATCGCGAA ACTACAATGA TCCTAGACAA TATGTACTAC AAAAACATCT TGAACCACAA GGGGCTATTA ATTGTAGATC AAGAATTGGT TACTGATTCA
ACTACTTCTC CATTTGTGGA AAAAATGGCT GCTGACAATG GCTATTTCCA TGATCAATTT GCTCGGGCTT TGCTCATTTT GTCTGAAAAC AATCCACTTA CTGGAGATCA AGGCGAGATT
AGAAAAGTTT GCCGTTACGT AAATAGTGCT TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGAGCAAATT ACAAGACTTC ACTATATACA GAGACATGGA CAACAACCAC AATCATTTCA GTCTCTCCTC AAGATTTCTC CTTCTGTTAT TACCACTACT TCTTCACATT CACCATGTAA
GAAGTGAACT CCAATTGAAC TACTACTTAG AGAGTTGCCC AAGAGCTGAA GAAATAATCA AAGAACAAGT GGCACAGTTG TACCACAAGC ATGGCAATAC AGCAGTTTCT TGGATTAGAA
ATCTCTTTCA TGATTGCATG GTTAAGTCAT GTGATGCATC AATATATTTG GACACAGCAA ATGGACAGGA ATCAGAGAAG ACATCTCCAA AAAACTTTGG AATGAGAAAT TTTAAGTATG
TAGAGACTAT TAAACAGGCA CTTGAGAGTG AATGTCCTAA TACTGTTTCT TGTGCTGATA TTGTTGCTCT TTCCGCCAGA GATGGTCTTC TCTGGTTGGG AGGGCCACGT GTTGAAATGA
GAACAGGAAG GAAAGACAGC AAAGAAAGTT ACTTAGCAGA AGTTGAGAGT TCCCTTCCTA ATCACAATGA TTCCATGTCA TCAGTCCTTT CTCGATTCCA ATCCATTGGT GTTGATACT
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Retrieve as FASTA
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