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Entry information : HanCIIBA01 (MnP03b / gpx1)
Entry ID 7276
Creation 2010-02-27 (Marcel Zamocky)
Last sequence changes 2011-09-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-02-02 (Christophe Dunand)
Peroxidase information: HanCIIBA01 (MnP03b / gpx1)
Name (synonym) HanCIIBA01 (MnP03b / gpx1)
Class Other class II peroxidase type A    [Orthogroup: CIIBA001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Bondarzewiaceae Heterobasidion
Organism Heterobasidion annosum (root rot fungus)    [TaxId: 13563 ]
Cellular localisation Secreted
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HanCIIBA01
start..stop		 S start..stop
PcriCIIBB05 372 6.91e-129 1..344 1..342
PoVP04_PC15 370 3.15e-128 1..346 1..343
PoVP04_PC9 369 5.42e-128 1..346 1..343
HanCIIBB04 360 1.85e-124 1..346 1..343
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7276' 'join(472344..472404,472478..472667,472772..472912,472981..473102,473158..473233,473299..473424,473498..473580,473643..473678,473740..473912,473973..474011)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 472344..472404 59 N° 2 472478..472667 188 N° 3 472772..472912 139 N° 4 472981..473102 120
N° 5 473158..473233 74 N° 6 473299..473424 124 N° 7 473498..473580 81 N° 8 473643..473678 34
N° 9 473740..473912 171 N° 10 473973..474011 37  
join(472344..472404,472478..472667,472772..472912,472981..473102,473158..473233, 473299..473424,473498..473580,473643..473678,473740..473912,473973..474011)


exon

Literature and cross-references HanCIIBA01 (MnP03b / gpx1)
Literature Stenlid J. (2010) What have we learnt about pathogenicity from sequencing the Heterobasidion genome? ECFG-10 abstract book p.16; JGI genome draft.
DNA ref. JGI genome:   scaffold_06 (472344..474011)
EST ref. GenBank:   GR744426.1 [5' end]  GR734476.1 [3' end]
Cluster/Prediction ref. JGI gene:   181069
Protein sequence: HanCIIBA01 (MnP03b / gpx1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348 (327)
PWM (Da):   %s   37345.07 (35123.9)  
PI (pH):   %s   4.32 (4.27) Peptide Signal:   %s   cut: 22 range:22-348
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFNIPTLLFAAFAFSSLAHAAITPRVECADGSITTNKACCPLFS
LRDQLQRDFFEGECDFESRGSLRLAFHDAVGYSLSNPNGGGGADGSIMQFASIENAYDANLGIDEIVNAQLQFLATHNVSLSYGDFIQFASAVGLTNCPGAPTLDFYLGRPDAKAAAPDDTVPEPHTPDIILARMADV
GFTPNEVVALLASHTMATSKEVDETIAALPFDSTPATFDTQFYLESLLNGTMYPGADGKNFGQEMSPFGGVIRITSDYLLADSRTACQWQGMIKNQSRMQSAFKAAMKKLSLVGQNELSL
IDCSEVILPAARVNDSPHFPHGTSEKDVDQCNMPFPDLPTTA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns), and 9 ESTs (confirm the short 3'end). Strain="TC 32-1".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTCAACATCCCCACTCTCCTTTTCGCTGCATTCGCTTTTTCGTCGCTCGCTCATGTGGTGCGTACAGGGAACCGTTTCAACTTCCCTTCCACGAATTCGAGACCGTTGACGCGA
GCGGAATGCTCAACAGCTGCAATCACCCCCCGCGTCGAATGCGCCGACGGTAGCATCACCACGAACAAGGCGTGCTGTCCGCTCTTCAGCCTCCGCGACCAGCTCCAGCGCGACTTTTTC
GAGGGGGAGTGCGACTTCGAGTCCCGCGGATCCCTCCGCCTCGCTTTCCATGACGCTGTCGGATATTCTCTGTCGAATCCAAATGGGGGTGCGTCCACGCCGGCCCCCTTCAGTCATCTT
GCGGTGGGTTCTGATCGATCAACACCGTCACACTGCTCGGCTCGACTACACCTACCCCGCGGCCAAATTCAGCGGCGGAGGCGCCGACGGTTCCATCATGCAGTTCGCATCAATCGAGAA
CGCGTACGATGCCAACCTCGGTATCGACGAGATCGTCAACGCGCAGCTGCAGTTCCTCGCGACACACAATGTGTCCCTCAGCTACGGTGACTTTTGTGTGTATACCCTGTCCGCGCCATC
CATGTTCGATTTATTGAGTGACATGACCATGCGTGCTGTCTAGTATCCAGTTTGCAAGTGCCGTAGGGCTGACCAACTGTCCTGGCGCACCTACACTCGATTTCTATCTCGGACGCCCGG
ACGCCAAGGCTGCTGCTCCGGATGACACTGTCCCGGAGCCCTTCCCCGTTCGTCCGCCTCGCATTCCGGCGCCGACAGGGCTTAACTGAACAACCTGCACAGACACGCCCGATATCATTC
TGGCCCGCATGGCCGATGTGGGATTCACCCCGAATGAGGTCGTCGCTCTGCTTGCCTCTCGTGAGTCCACGTCTAAAAACGTGCAGGTGAAAAGGTCTGATGTGTTGGACGCGGCGATCT
GCAAGGCACACAATGGCAACATCAAAGGAAGTCGACGAAACAATTGCCGCGCTGCCCTTTGATTCGACGCCCGCGACGTTCGACACGCAGTTCTACCTCGAGTCGCTGCTGAACGGTACC
ATGTATCCTGGGGGTTCGTGCATTCTTATCCCTCCAGCAGAAAAACGAAATTGTAGCTGACGGGGCTTCGCGATGGGTGACTGTAGGGCTGATGGTAAAAATTTCGGTCAAGAGATGTCT
CCCTTTGGCGGCGTGATCCGCATCACATCCGATTATCTGCTAGCAAGGGGGGTACGTCTGCATCTGTGCAAATGCAGGGACCTCTTAAAATCGCGACTCACCTTGCGAACCAGATTCGCG
CACAGCGTGTCAATGGCAAGGAATGATCACAGTGCGTCGTGTTGTCTTGTGGAACAGAATGAGATCAGATAAGTGCTGATCTCCTGTCACAGAGAACCAATCGCGGATGCAGTCTGCGTT
CAAAGCCGCGATGAAGAAGCTCTCGCTTGTCGGGCAGAATGAGCTCAGCCTCATCGACTGCTCTGAGGTCATCCTGCCTGCCGCGCGCGTCAATGACAGCCCACATTTCCCGCATGGCAC
GTCGGAGAAGGATGTTGATCAATCGCGGTGCGTGCGCACCTCTGCGCGCGTCTGCTCTGGTATCTGACTGAGCGACTTGCGAAACAGTGCAATATGCCGTTCCCGGACTTGCCCACCACA
GCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTCAACATCCCCACTCTCCTTTTCGCTGCATTCGCTTTTTCGTCGCTCGCTCATGCTGCAATCACCCCCCGCGTCGAATGCGCCGACGGTAGCATCACCACGAACAAGGCGTGC
TGTCCGCTCTTCAGCCTCCGCGACCAGCTCCAGCGCGACTTTTTCGAGGGGGAGTGCGACTTCGAGTCCCGCGGATCCCTCCGCCTCGCTTTCCATGACGCTGTCGGATATTCTCTGTCG
AATCCAAATGGCGGCGGAGGCGCCGACGGTTCCATCATGCAGTTCGCATCAATCGAGAACGCGTACGATGCCAACCTCGGTATCGACGAGATCGTCAACGCGCAGCTGCAGTTCCTCGCG
ACACACAATGTGTCCCTCAGCTACGGTGACTTTATCCAGTTTGCAAGTGCCGTAGGGCTGACCAACTGTCCTGGCGCACCTACACTCGATTTCTATCTCGGACGCCCGGACGCCAAGGCT
GCTGCTCCGGATGACACTGTCCCGGAGCCCTTCCACACGCCCGATATCATTCTGGCCCGCATGGCCGATGTGGGATTCACCCCGAATGAGGTCGTCGCTCTGCTTGCCTCGCACACAATG
GCAACATCAAAGGAAGTCGACGAAACAATTGCCGCGCTGCCCTTTGATTCGACGCCCGCGACGTTCGACACGCAGTTCTACCTCGAGTCGCTGCTGAACGGTACCATGTATCCTGGGGCT
GATGGTAAAAATTTCGGTCAAGAGATGTCTCCCTTTGGCGGCGTGATCCGCATCACATCCGATTATCTGCTAGCAAGGGATTCGCGCACAGCGTGTCAATGGCAAGGAATGATCAAGAAC
CAATCGCGGATGCAGTCTGCGTTCAAAGCCGCGATGAAGAAGCTCTCGCTTGTCGGGCAGAATGAGCTCAGCCTCATCGACTGCTCTGAGGTCATCCTGCCTGCCGCGCGCGTCAATGAC
AGCCCACATTTCCCGCATGGCACGTCGGAGAAGGATGTTGATCAATCGTGCAATATGCCGTTCCCGGACTTGCCCACCACAGCCTAA

Retrieve as FASTA