Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
335 (307) |
PWM (Da): |
35954.93 (32927.5) |
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PI (pH): |
7.9 (8.21) |
Peptide Signal: |
cut: 29 range:29-335 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MMASASIDYR NAVLLAVVVF ATLCACEAKS PYAVGLSEDF YEKTCPQAAA IVDAYVTKFL RKDRTFAGAF NRLQFHDCWV GGCDGSVLLN STGSIQAERE AHVNFGLRGV AEIDEIKAGL
EYFCPGVVSC ADILIMAARD ATAKVGGPTW PVAMGRRDGV NSTALMADTN LPFPVLNFSG LVANFAAKGF SAKEMITLSG AHTIGQSHCN GILPHLYNFT GKDDATDTDP AMNKNFAVFL
KKLCPQGNRT NTIFIDSTAS TFDRAYYKNV LHGKGIFMTD SALITNPLGK KVVRSFSKPG SSFFTEFAAG MVKMGNLGVL TGTEGEIRKT CQFVN*
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic and 1 EST. Strain="E". Incorrect prediction from Phytozome: extra intron in 5' 'confirmed with EST |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATGGCAT CTGCAAGCAT CGACTACCGC AATGCGGTTC TCTTGGCCGT CGTAGTTTTT GCAACACTGT GCGCATGTGA GGCAAAGAGT CCCTATGCCG TCGGCCTTTC AGAGGACTTC
TATGAAAAAA CTTGTCCTCA AGCAGCTGCG ATTGTGGACG CCTATGTCAC AAAGTTCCTC AGGAAAGACA GAACCTTTGC GGGTGCCTTC AACCGGTTGC AGTTCCATGA TTGCTGGGTT
GGGGTAAGTA CTCCAAATGC TGAAGTGTCT GAGCACCTCT TCTGTACTAC CATCTGGTGA AATCCACGTT TTGGAGGTCA ATAATGTCAG GAGTTTTAGT TTCTCCTAGG CCATAATGTA
TTTCCTGAGC TTTTAGACCA ATACTTAAGC TTTCGTTATT GGATTCTGTT CTCGAGCGAT TAGTTCATAA CCACACGTAC TACTCGGACT GGACCTCCAG GGCTGTGATG GTTCAGTTCT
GTTGAACTCG ACCGGGAGCA TCCAAGCCGA GAGGGAAGCT CATGTTAACT TCGGTCTCAG AGGAGTTGCG GAGATCGATG AAATCAAGGC AGGTCTAGAA TACTTCTGCC CTGGTGTCGT
CTCCTGTGCG GATATTCTGA TCATGGCTGC TCGTGACGCC ACAGCCAAGG TAAATCGAAC CATCACTATC TCCTTCACAT ATGTTAAAAT CCAGCCTTTG TGAAAATTTT CACGATAGAA
TCTGCCCATC TCACTATGCT TTAACGATGT TTTCCTCTTC TTAAATCAAA CAGGTTGGAG GCCCCACTTG GCCAGTCGCT ATGGGTCGCA GAGACGGAGT GAACTCCACA GCCTTGATGG
CTGATACCAA TCTACCCTTC CCTGTGCTGA ACTTCAGCGG GCTTGTTGCT AACTTTGCCG CCAAGGGATT CAGTGCAAAA GAAATGATAA CTCTTTCAGG TCTGAGAATT GTTGCCATGA
GCGTTCTGAT ATTCTTGCTG AAAGTTTGAG AAGCCACTTT CGCTTTGAAA CTCATGAATG CGTGTTGTAA GGTTTCAAGG CTTATTATAC ACAAAGTTCG TATGCATCTA TGACCTTAAA
AACTTAGCTG CTGGAGTAAC TTCTTTTGCC TCAATGGAGA TAGTAGAAAG AATTTTCAGC CCAGAGGATA GACAGCATGA GGATATGTTT CATCCGTTCG GATTTTTTTT GATTTTCAGG
TGCACACACT ATCGGTCAGT CCCACTGCAA TGGAATCCTT CCACATCTCT ACAACTTCAC TGGAAAGGAT GATGCCACCG ATACGGACCC TGCCATGAAT AAGAACTTCG CTGTCTTCCT
TAAAAAGCTT TGTCCTCAGG GTAACAGGAC GAACACAATC TTCATTGACT CCACAGCAAG CACCTTCGAC CGTGCCTACT ACAAAAACGT GCTGCACGGC AAGGGAATTT TCATGACAGA
CTCCGCCCTC ATTACCAACC CTTTGGGAAA GAAAGTTGTT CGCTCGTTTT CAAAGCCTGG CTCCAGCTTC TTCACAGAAT TTGCAGCAGG CATGGTGAAG ATGGGAAACC TCGGGGTTCT
CACTGGAACT GAAGGTGAAA TCCGCAAGAC GTGCCAGTTC GTGAATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATGGCAT CTGCAAGCAT CGACTACCGC AATGCGGTTC TCTTGGCCGT CGTAGTTTTT GCAACACTGT GCGCATGTGA GGCAAAGAGT CCCTATGCCG TCGGCCTTTC AGAGGACTTC
TATGAAAAAA CTTGTCCTCA AGCAGCTGCG ATTGTGGACG CCTATGTCAC AAAGTTCCTC AGGAAAGACA GAACCTTTGC GGGTGCCTTC AACCGGTTGC AGTTCCATGA TTGCTGGGTT
GGGGGCTGTG ATGGTTCAGT TCTGTTGAAC TCGACCGGGA GCATCCAAGC CGAGAGGGAA GCTCATGTTA ACTTCGGTCT CAGAGGAGTT GCGGAGATCG ATGAAATCAA GGCAGGTCTA
GAATACTTCT GCCCTGGTGT CGTCTCCTGT GCGGATATTC TGATCATGGC TGCTCGTGAC GCCACAGCCA AGGTTGGAGG CCCCACTTGG CCAGTCGCTA TGGGTCGCAG AGACGGAGTG
AACTCCACAG CCTTGATGGC TGATACCAAT CTACCCTTCC CTGTGCTGAA CTTCAGCGGG CTTGTTGCTA ACTTTGCCGC CAAGGGATTC AGTGCAAAAG AAATGATAAC TCTTTCAGGT
GCACACACTA TCGGTCAGTC CCACTGCAAT GGAATCCTTC CACATCTCTA CAACTTCACT GGAAAGGATG ATGCCACCGA TACGGACCCT GCCATGAATA AGAACTTCGC TGTCTTCCTT
AAAAAGCTTT GTCCTCAGGG TAACAGGACG AACACAATCT TCATTGACTC CACAGCAAGC ACCTTCGACC GTGCCTACTA CAAAAACGTG CTGCACGGCA AGGGAATTTT CATGACAGAC
TCCGCCCTCA TTACCAACCC TTTGGGAAAG AAAGTTGTTC GCTCGTTTTC AAAGCCTGGC TCCAGCTTCT TCACAGAATT TGCAGCAGGC ATGGTGAAGA TGGGAAACCT CGGGGTTCTC
ACTGGAACTG AAGGTGAAAT CCGCAAGACG TGCCAGTTCG TGAATTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTCTTCCAG CCCAATTGTG ATTTCTTGCA ACGATTGCCA TCAGCCACAA CAGGTAATGC ATGCATTTTG CAGAAGTTTA TCATCACCGG CTGACTCTTC CAGCCCAATT GTGATTTCTT
GCAACGATTG CCATCAGCCA CAACAGGTAA TGATGGCATC TGCAAGCATC GACTACCGCA ATGCGGTTCT CTTGGCCGTC GTAGTTTTTG CAACACTGTG CGCATGTGAG GCAAAGAGTC
CCTATGCCGT CGGCCTTTCA GAGGACTTCT ATGAAAAAAC TTGTCCTCAA GCAGCTGCGA TTGTGGACGC CTATGTCACA AAGTTCCTCA GGAAAGACAG AACCTTTGCG GGTGCCTTCA
ACCGGTTGCA GTTCCATGAT TGCTGGGTTG GGGGCTGTGA TGGTTCAGTT CTGTTGAACT CGACCGGGAG CATCCAAGCC GAGAGGGAAG CTCATGTTAA CTTCGGTCTC AGAGGAGTTG
CGGAGATCGA TGAAATCAAG GCAGGTCTAG AATACTTCTG CCCTGGTGTC GTCTCCTGTG CGGATATTCT GATCATGGCT GCTCGTGACG CCACAGCCAA GGTTGGAGGC CCCACTTGGC
CAGTCGCTAT GGGTCGCAGA GACGGAGTGA ACTCCACAGC CTTGATGGCT GATACCAATC TACCCTTCCC TGTGCTGAAC TTCAGCGGGC TTGTTGCTAA CTTTGCCGCC AAGGGATTCA
GTGCAAAAGA AATGATAACT CTTTCAGGTG CACACACTAT CGGTCAGTCC CACTGCAATG GAATCCTTCC ACATCTCTAC AACTTCACTG GAAAGGATGA TGCCACCGAT ACGGACCCTG
CCATGAATAA GAACTTCGCT GTCTTCCTTA AAAAGCTTTG TCCTCAGGGT AACAGGACGA ACACAATCTT CATTGACTCC ACAGCAAGCA CCTTCGACCG TGCCTACTAC AAAAACGTGC
TGCACGGCAA GGGAATTTTC ATGACAGACT CCGCCCTCAT TACCAACCCT TTGGGAAAGA AAGTTGTTCG CTCGTTTTCA AAGCCTGGCT CCAGCTTCTT CACAGAATTT GCAGCAGGCA
TGGTGAAGAT GGGAAACCTC GGGGTTCTCA CTGGAACTGA AGGTGAAATC CGCAAGACGT GCCAGTTCGT GAATTAGGAA TTTGTTCCAA AGTTTCCAAA TAGTATCAAA TTAGTGTTGC
AACAGCAGGT AGGATGACTA AATACCTCAC GGCTCAAAAC AGATTCATGG CATAGGTAGG ATGATTTGAT TCATTTGCTT AAGTTCAGAA TAAGCTCCAG TTAGATCCAC GAGGATTTCC
CACTTGCGTA CAGTGCTCAC TATGCACGAG AGCTAGGAAA CACAAGATTG GAATGAGTAT CTACACCAGA TTCAAACTGG AAAAAGTTGA GCAAATTGTC TCCAGTCGCT TTCAAGGGAA
TGTACATTGA TATTCCTGCA AGGGCTGGAT ATTCTTTTAA AATAAAGAAA ATT
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Retrieve as FASTA
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