View Redoxidase 7410

Entry information : SmDiOx-1_0 (SmDiOxa_0)

Entry ID	7410
Creation	0000-00-00 (Christophe Dunand)
Last sequence changes	2011-02-23 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-02-23 (Christophe Dunand)

Peroxidase information: SmDiOx-1_0 (SmDiOxa_0)

Name (synonym)

SmDiOx-1_0 (SmDiOxa_0)

Class

Alpha-dioxygenase [Orthogroup: DiOx001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella

Organism

Selaginella moellendorffii [TaxId: 88036 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SmDiOx-1_0 start..stop	S start..stop
SmDiOx-2_8	1155	0	1..574	1..571
PabDiOx01	711	0	42..574	97..623
CclDiOx02	702	0	7..574	62..623
PsDiOx01	694	0	48..572	107..625

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7410' 'join(3393093..3393209,3393286..3393378,3393432..3393590,3393652..3393785,3393832..3394045,3394102..3394247,3394313..3394549,3394614..3394816,3394888..3395131,3395188..3395365)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3393093..3393209	115	N° 2	3393286..3393378	91	N° 3	3393432..3393590	157	N° 4	3393652..3393785	132
N° 5	3393832..3394045	212	N° 6	3394102..3394247	144	N° 7	3394313..3394549	235	N° 8	3394614..3394816	201
N° 9	3394888..3395131	242	N° 10	3395188..3395365	176
join(3393093..3393209,3393286..3393378,3393432..3393590,3393652..3393785,3393832 ..3394045,3394102..3394247,3394313..3394549,3394614..3394816,3394888..3395131,33 95188..3395365)

Literature and cross-references SmDiOx-1_0 (SmDiOxa_0)

DNA ref.	Phytozome 12: scaffold_0 (3393093..3395364)
mRNA ref.	JGI transcript: 229898 [Incorrect prediction]

Protein sequence: SmDiOx-1_0 (SmDiOxa_0)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	574
PWM (Da):	64349.08
PI (pH):	7.39

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MIPDRPFRRQTHGVAQAPACVLAVLSRHPEDTPPKLQLEKKSSGEHVNVKSGDYGSFIGRNAFAPASGSEELLDPHPSVVATKFLSRKESEFADTGKQFNMIAASWIQFMIHDWVDHQED
TKEQEIVAPESVAAQCPLKEFRFLRTKEDETGSQDIPLGHRNMRTSWWDGSVLYGSHDGALARVRTGKDGKLKIGQNGLLERDDHGVAISGDVKNTWAGVSILQALFVKEHNAVCDMLKR
THPEFGDEELYLHARLVVAAVIAKIHTIDWTVELLKTKALDIGMHANWYGLLGKRIKSWIGHTGSSLLSGFIGMKEPINHGVPYALTEEFTCVYRLHPLLPDDIVLRDITGSGEEKQTKT
PRATGKRIPMIELIGSEGEKTLVAxGNERMIASLGHQACGALVLFNYPQWMRDLPQTGTDGINRPNHVDMAALEIYRDRERKVARYNAFRRNMLMIPIKKWEDLTDDKQTLALLREVYGE
DVEKLDLLVGLLAEKKIKGFAISETSFFIFLLMATRRLEADRFFTSNFNAKSYTKEGLAWVNNTESLKDVLQRHHGNLVDKWLNARSAFSVWSA

Retrieve as FASTA

Remarks

Complete sequence from genomic (

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATACCAGATCGTCCATTTCGTCGACAAACACACGGCGTGGCACAAGCTCCCGCTTGTGTTCTCGCTGTTTTATCTCGACATCCGGAGGACACTCCACCAAAACTACAACTTGAAAAG
TACGTCGGACCTCCAATCTCAGAAGAAGAGAAAAAAGCCGCGCAGGATGACTGCATAGCTCCGCCTTTCCGGAAGAAAAAATCCAGTGGCGAGCACGTCAATGTCAAAAGTGGCGACTAT
GGATCATTCATTGGGAGAAATGCCTTTGCTCCAGCATCCGGATCCGAGAGGTCTCTCTTCTCTCTCTCTCTCTCTCTCATGAGATTCGATTTGCGTCGAGCAGGAACTTTTGGATCCACA
TCCCAGTGTTGTGGCGACCAAATTTCTGTCGAGAAAGGAATCCGAATTCGCGGACACGGGCAAGCAGTTCAACATGATCGCGGCGTCCTGGATCCAGTTTATGATCCACGACTGGGTCGA
CCACCAGGAAGACACAAAAGAGAGGTATGATTCGTGTGATCGAAGCCAAGGATTCTTCTCACGGATGATTTTGTTTTCGATCCAGCAAGAGATTGTAGCTCCGGAATCAGTCGCAGCGCA
GTGTCCCTTGAAGGAATTTCGGTTCCTCCGCACGAAAGAGGACGAAACGGGCTCGCAAGACATCCCTTTGGGGCATAGGAACATGAGAACATCGTGGTGTGGTATGAAACTCTTGTAATT
GGAGGGAAGTTTCATTTTACATTTTAGGGATGGGAGTGTTCTATACGGGAGCCACGACGGTGCGCTGGCGAGGGTGCGCACTGGCAAAGATGGAAAACTTAAGATCGGCCAAAATGGCCT
CCTTGAGCGCGACGATCACGGCGTCGCCATCTCCGGCGATGTCAAGAACACCTGGGCCGGGGTTTCGATTCTCCAGGCGCTTTTCGTCAAGGAGCACAATGCCGTGTGTGACATGCTCAA
GAGGTGCGTGTGCCTCGATCGATCTCTAGCTCTGGATTGCCGCTAAATCGTCGCTCCAGAGGACGCATCCGGAATTCGGGGACGAAGAGCTCTACCTTCATGCGAGATTGGTCGTCGCTG
CCGTGATTGCCAAGATTCACACCATCGACTGGACTGTGGAGCTGCTCAAGACGAAAGCGCTCGACATTGGAATGCATGCAAACTGTGGTGAGCTTTTCTTCTTTACGTCCACCTTTTCTA
GCGATTTCGACTGACTTCGAGAGTGCATCCAGGTATGGTTTACTGGGGAAGAGAATCAAGAGCTGGATCGGGCACACTGGATCCTCGCTGCTGAGTGGATTTATTGGAATGAAGGAGCCA
ATAAACCACGGCGTTCCTTACGCCTTGACGGAGGAGTTTACGTGCGTTTATCGCCTCCATCCTTTGCTACCAGACGACATTGTGCTGAGAGACATCACTGGCAGTGGGGAAGAGAAACAA
ACCAAGACTCCTCGAGCCACTGGAAAGAGAGGTACCTCCATCTCTTTTTTTTTAATTTTACCACTCCTGACTAAACTTTTTCTTGTGATCTATAGAATTCCCATGATCGAGCTCATTGGA
AGTGAGGGAGAAAAAACGCTGGTAGCATTNGGAAACGAGAGAATGATCGCGTCGCTTGGGCATCAAGCTTGTGGAGCGCTCGTTCTTTTCAACTATCCGCAGTGGATGAGGGACCTTCCC
CAGACTGGAACCGACGGCATAAACCGCCCGAATCACGTCGACATGGCCGCCCTCGAGAGAGTAAGTTCTGTTCTTGCCAGACGCTTGTTTTCCTCGATCTTATCTTTGCATCTCTGCACT
TTTTGTCCCAGTTTACCGTGATCGCGAAAGAAAAGTTGCAAGATACAATGCCTTTCGGAGAAACATGTTGATGATTCCAATCAAGAAGTGGGAGGATCTCACCGATGACAAACAAACACT
CGCCTTGCTGAGGGAGGTATACGGCGAGGACGTGGAGAAGCTCGACTTGCTCGTCGGCTTGCTGGCGGAGAAGAAGATCAAAGGCTTCGCCATTAGCGAGACGTCGTTTTTCATCTTTCT
CCTCATGGCCACCAGAGGTAAAAACTGCTAGAACCAAGTCACAGTTTTAACACATTGCATTGCTTTCCCACAGGAGGCTAGAAGCTGATCGATTCTTTACCTCAAACTTTAACGCCAAGA
GCTACACCAAGGAGGGACTGGCGTGGGTGAACAACACCGAGAGCCTCAAAGACGTCCTCCAGAGGCACCACGGCAACTTGGTTGATAAGTGGCTAAACGCACGCAGCGCATTCAGCGTGT
GGAGTGCGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATACCAGATCGTCCATTTCGTCGACAAACACACGGCGTGGCACAAGCTCCCGCTTGTGTTCTCGCTGTTTTATCTCGACATCCGGAGGACACTCCACCAAAACTACAACTTGAAAAA
AAATCCAGTGGCGAGCACGTCAATGTCAAAAGTGGCGACTATGGATCATTCATTGGGAGAAATGCCTTTGCTCCAGCATCCGGATCCGAGGAACTTTTGGATCCACATCCCAGTGTTGTG
GCGACCAAATTTCTGTCGAGAAAGGAATCCGAATTCGCGGACACGGGCAAGCAGTTCAACATGATCGCGGCGTCCTGGATCCAGTTTATGATCCACGACTGGGTCGACCACCAGGAAGAC
ACAAAAGAGCAAGAGATTGTAGCTCCGGAATCAGTCGCAGCGCAGTGTCCCTTGAAGGAATTTCGGTTCCTCCGCACGAAAGAGGACGAAACGGGCTCGCAAGACATCCCTTTGGGGCAT
AGGAACATGAGAACATCGTGGTGGGATGGGAGTGTTCTATACGGGAGCCACGACGGTGCGCTGGCGAGGGTGCGCACTGGCAAAGATGGAAAACTTAAGATCGGCCAAAATGGCCTCCTT
GAGCGCGACGATCACGGCGTCGCCATCTCCGGCGATGTCAAGAACACCTGGGCCGGGGTTTCGATTCTCCAGGCGCTTTTCGTCAAGGAGCACAATGCCGTGTGTGACATGCTCAAGAGG
ACGCATCCGGAATTCGGGGACGAAGAGCTCTACCTTCATGCGAGATTGGTCGTCGCTGCCGTGATTGCCAAGATTCACACCATCGACTGGACTGTGGAGCTGCTCAAGACGAAAGCGCTC
GACATTGGAATGCATGCAAACTGGTATGGTTTACTGGGGAAGAGAATCAAGAGCTGGATCGGGCACACTGGATCCTCGCTGCTGAGTGGATTTATTGGAATGAAGGAGCCAATAAACCAC
GGCGTTCCTTACGCCTTGACGGAGGAGTTTACGTGCGTTTATCGCCTCCATCCTTTGCTACCAGACGACATTGTGCTGAGAGACATCACTGGCAGTGGGGAAGAGAAACAAACCAAGACT
CCTCGAGCCACTGGAAAGAGAATTCCCATGATCGAGCTCATTGGAAGTGAGGGAGAAAAAACGCTGGTAGCATTNGGAAACGAGAGAATGATCGCGTCGCTTGGGCATCAAGCTTGTGGA
GCGCTCGTTCTTTTCAACTATCCGCAGTGGATGAGGGACCTTCCCCAGACTGGAACCGACGGCATAAACCGCCCGAATCACGTCGACATGGCCGCCCTCGAGATTTACCGTGATCGCGAA
AGAAAAGTTGCAAGATACAATGCCTTTCGGAGAAACATGTTGATGATTCCAATCAAGAAGTGGGAGGATCTCACCGATGACAAACAAACACTCGCCTTGCTGAGGGAGGTATACGGCGAG
GACGTGGAGAAGCTCGACTTGCTCGTCGGCTTGCTGGCGGAGAAGAAGATCAAAGGCTTCGCCATTAGCGAGACGTCGTTTTTCATCTTTCTCCTCATGGCCACCAGGAGGCTAGAAGCT
GATCGATTCTTTACCTCAAACTTTAACGCCAAGAGCTACACCAAGGAGGGACTGGCGTGGGTGAACAACACCGAGAGCCTCAAAGACGTCCTCCAGAGGCACCACGGCAACTTGGTTGAT
AAGTGGCTAAACGCACGCAGCGCATTCAGCGTGTGGAGTGCGTGA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATACCAG ATCGTCCATT TCGTCGACAA ACACACGGCG TGGCACAAGC TCCCGCTTGT GTTCTCGCTG TTTTATCTCG ACATCCGGAG GACACTCCAC CAAAACTACA ACTTGAAAAA AAATCCAGTG GCGAGCACGT CAATGTCAAA AGTGGCGACT ATGGATCATT CATTGGGAGA AATGCCTTTG CTCCAGCATC CGGATCCGAG GAACTTTTGG ATCCACATCC CAGTGTTGTG GCGACCAAAT TTCTGTCGAG AAAGGAATCC GAATTCGCGG ACACGGGCAA GCAGTTCAAC ATGATCGCGG CGTCCTGGAT CCAGTTTATG ATCCACGACT GGGTCGACCA CCAGGAAGAC ACAAAAGAGC AAGAGATTGT AGCTCCGGAA TCAGTCGCAG CGCAGTGTCC CTTGAAGGAA TTTCGGTTCC TCCGCACGAA AGAGGACGAA ACGGGCTCGC AAGACATCCC TTTGGGGCAT AGGAACATGA GAACATCGTG GTGGGATGGG AGTGTTCTAT ACGGGAGCCA CGACGGTGCG CTGGCGAGGG TGCGCACTGG CAAAGATGGA AAACTTAAGA TCGGCCAAAA TGGCCTCCTT GAGCGCGACG ATCACGGCGT CGCCATCTCC GGCGATGTCA AGAACACCTG GGCCGGGGTT TCGATTCTCC AGGCGCTTTT CGTCAAGGAG CACAATGCCG TGTGTGACAT GCTCAAGAGG ACGCATCCGG AATTCGGGGA CGAAGAGCTC TACCTTCATG CGAGATTGGT CGTCGCTGCC GTGATTGCCA AGATTCACAC CATCGACTGG ACTGTGGAGC TGCTCAAGAC GAAAGCGCTC GACATTGGAA TGCATGCAAA CTGGTATGGT TTACTGGGGA AGAGAATCAA GAGCTGGATC GGGCACACTG GATCCTCGCT GCTGAGTGGA TTTATTGGAA TGAAGGAGCC AATAAACCAC GGCGTTCCTT ACGCCTTGAC GGAGGAGTTT ACGTGCGTTT ATCGCCTCCA TCCTTTGCTA CCAGACGACA TTGTGCTGAG AGACATCACT GGCAAGAGAA TGATCGCGTC GCTTGGGCAT CAAGCTTGTG GAGCGCTCGT TCTTTTCAAC TATCCGCAGT GGATGAGGGA CCTTCCCCAG ACTGGAACCG ACGGCATAAA CCGCCCGAAT CACGTCGACA TGGCCGCCCT CGAGATTTAC CGTGATCGCG AAAGAAAAGT TGCAAGATAC AATGCCTTTC GGAGAAACAT GTTGATGATT CCAATCAAGA AGTGGGAGGA TCTCACCGAT GACAAACAAA CACTCGCCTT GCTGAGGGAG GTATACGGCG AGGACGTGGA GAAGCTCGAC TTGCTCGTCG GCTTGCTGGC GGAGAAGAAG ATCAAAGGCT TCGCCATTAG CGAGACGTCG TTTTTCATCT TTCTCCTCAT GGCCACCAGG AGGCTAGAAG CTGATCGATT CTTTACCTCA AACTTTAACG CCAAGAGCTA CACCAAGGAG GGACTGGCGT GGGTGAACAA CACCGAGAGC CTCAAAGACG TCCTCCAGAG GCACCACGGC
AACTTGGTTG ATAAGTGGCT AAACGCACGC AGCGCATTCA GCGTGTGGAG TGCGTGA

Retrieve as FASTA