View Redoxidase 7428

Entry information : PpaPrxII0503 (PpaPrxIIE03)

Entry ID	7428
Creation	0000-00-00 (Christophe Dunand)
Last sequence changes	2010-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-01-25 (Toky Ramarohetra (Scipio))

Peroxidase information: PpaPrxII0503 (PpaPrxIIE03)

Name (synonym)

PpaPrxII0503 (PpaPrxIIE03)

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella

Organism

Physcomitrella patens [TaxId: 3218 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PpaPrxII0503 start..stop	S start..stop
PabPrxII178	254	9.81e-84	130..313	63..239
PpaPrxII0502	253	4.35e-83	152..315	85..248
PpaPrxII0501	250	5.73e-82	152..315	82..245
AcvPrxII05	246	1.44e-80	121..313	38..229

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1458973..1459968	994	N° 2	1457157..1457351	193
complement(join(1457157..1457351,1458973..1459968))

Literature and cross-references PpaPrxII0503 (PpaPrxIIE03)

DNA ref.	Phytozome 12: scaffold_1 (1459968..1457157)
EST ref.	GenBank: DC914986.1 [Fragment] DC928735.1 [Fragment]

Protein sequence: PpaPrxII0503 (PpaPrxIIE03)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	396 (378)
PWM (Da):	42387.11 (40428.1)
PI (pH):	10.45 (10.45)	Peptide Signal:	cut: 19 range:19-396

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTIHLLSAVMHLQSVLQGSSKCGYTQQSSRHGFFSTKATTTNPLS
VSNARASAAVQLKLVVNRAPPLLAFRIIWGLNALTFAFHINQATRSNTMAATAIAIRTFTNAAALSRGGTNLWST
YSRSLATLVPSHIRGVAAVRTLPTFGSRAATTIAEGSKLPD
AELSYFDKEGNVNIVKVSDLMRAKKVVLFAVPGAFTPTCSTQHLPGFVAKADKLRKAGADLLACVSVNDAFVMRAWGENQNVGESVLLLSDGLGKFTHAMGASVDLSDKPVGLGVRSRRY
AMLVDDGVVKTLHMEEGGAFTSSGADDILKALLKRKTSAATAPECANQNTTDLRLILDAMLLQPQLKETAHEFVFKFGTTTITIIVTIPTQHTNTCDRLKGSTQWSRTCSRCRLK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (1 intron) and 2 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACTATTCATCTTCTATCGGCAGTTATGCACCTGCAGTCAGTTTTGCAAGGTAGTTCAAAATGTGGATATACTCAACAATCATCCCGACATGGATTTTTCTCAACCAAAGCAACCACA
ACCAACCCCCTCTCTGTGTCGAACGCACGTGCAAGTGCTGCAGTGCAACTGAAACTCGTTGTAAATCGAGCACCTCCGCTTCTGGCATTCAGGATCATTTGGGGGCTTAATGCGCTAACA
TTTGCATTCCACATCAACCAGGCCACTCGCAGCAACACCATGGCTGCTACAGCAATAGCAATACGAACCTTCACAAACGCCGCTGCTCTTAGCAGGGGAGGGACAAACCTCTGGAGCACT
TACTCCCGCTCTCTGGCAACGCTCGTTCCAAGCCACATTCGCGGCGTCGCTGCAGTGAGGACACTGCCCACATTCGGATCCCGAGCGGCGACCACCATCGCGGAGGGCAGCAAGCTCCCC
GACGCCGAACTCTCGTATTTCGACAAGGAGGGTAACGTAAACATCGTCAAAGTCTCGGACCTCATGCGTGCCAAGAAGGTAGTCCTCTTCGCAGTCCCCGGCGCCTTCACCCCGACGTGC
TCCACGCAGCACCTTCCCGGATTCGTGGCCAAGGCGGACAAACTGCGGAAAGCAGGCGCGGATTTGCTGGCGTGCGTGAGCGTGAACGACGCCTTCGTGATGCGAGCGTGGGGGGAGAAT
CAGAACGTGGGCGAGAGTGTGTTGTTGCTGTCGGACGGGCTGGGGAAGTTCACGCACGCGATGGGCGCGAGCGTGGACCTGAGCGACAAACCCGTGGGGTTGGGGGTGCGGTCGCGGCGG
TATGCGATGCTGGTGGACGACGGCGTGGTGAAGACGCTGCATATGGAGGAGGGCGGCGCCTTCACCAGCAGCGGCGCCGACGACATCCTCAAGGCCTTGCTCAAGCGCAAGACCAGCGCC
GCCACCGCGCCCGAGTGCGCCAACCAGAACACCACGGTGCGTCACTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTAGAATCAATGAAAATCACTGTTTCATGGTCTGGAGTTTGAAGTTCATTCAAGATTGTTTATTTAAATATACATATGATGCATGCATCAGATGTTGTTTGAGAGTTGTTTGCAGAT
CCAATCATAGTAGGTATTCTAACATTTGATTTGAGTGATTGTGAACTGTTTCGATTTTGCAGTGATGATGCTGATAATGATTTTATGAGACACGTCCAAGCAAAAGTTTGTAAAACATTG
AATTGAAATGGTTTGCAATTTGAAACCATCATTGACTGGTACGATAAGAACATGTGAATTAGAAAAATGAGAACTGAATTTCTCTTCTGTGAGACAAATCATCACAAGTTAAATGCCCAA
GTAAGCACATTCATTGAAATTCTAATGAAAGAGTTCATTCTCATCTCAAATATCAATTTTCATTGTTTGTGATGTTTGAGCTGAATCAAAGCTCCCACAGTTCTGTTTCTCACACAGAGC
AAAGCAAAAATGATGGTAATTGAAAATTTTACATTATACTGTACTTCTCTCATTTCAGATACACCTAACTTGTTCTGCTAAAGTACATGAACTTGATTTGGCATTAAATTAGTTCATAAT
TTGATACAACTTGATATCAACTATACACACATATTTAACAAAGTAAATGGGTTCATAAGTTTCATTTACTCTTCACATGATAGTTATATAGCAAACTTAAATTCAATTAGTATTGTTGAA
TTTTCACTTTATTTTTAAAAATCATATCTCATTCATTTTGTATAATAATTAGTTGGTAAATTGATCAGTTAGTTTTACATTTAAGATTTATGTAGCAAACAACCAATTTTACAAGTTTAA
AAAATTTAACATTTTATTGAATGTGGTTTCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCATTCAGATCAATGTTCNNNNNNNNNNNNNNNNNNNNNNNC
TAATCAAACCTCCTCATGTATTGTTATATGTTTTTTGCTCTACAAATACAGTATTCATTTCATAGTTTCTTATATTGGACATTTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAAAATTCTATGAATTGATCCTCATGGTAATTAAAAATCAATAATCGAAACACAATAATAAAATTTAAAACTTTATATAAGATAGGATTATGAACNNNNNNNNNNNNNNNNN
NNNNNGATATATCTACTTGTCTTATAAAAAGAACACAACATTGGATAAAATAAAATACAAATGAACCCAGTTGCATATGATTATATTTGAAAAATATCCTTTTATTTTTGATTTTTAATA
ATACAGTCTTCTAATAGTCTTTTAAAATATAGGTCGTATTAAAGAGCTAAATAGTAAGTTATGAACTTATGGGAAAAGGTTAAACCGACATTAACCACCATGATTTATTACTTAATTGAT
ACTTACACTCTTATATTTTCCTCCAAGAGCCATGCAATCAAAACCTCAAAATAAACTTTGTTAGAATCAATGGGTGTTTTGCAATTTTCATTAGCAGGAGATTTGAGGCTCATTCTTGAT
GCAATGCTCCTACAACCTCAGCTCAAAGAAACTGCTCATGAGTTTGTCTTCAAGTTTGGCACCACAACCATCACAATCATTGTAACCATACCCACACAACACACCAATACATGTGATAGG
CTGAAAGGATCCACCCAATGGAGCAGGACTTGTTCTAGATGCAGATTAAAATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA