Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
339 (306) |
PWM (Da): |
36217.32 (32981.7) |
Transmb domain: |
i12-34o |
PI (pH): |
8.21 (7.36) |
Peptide Signal: |
cut: 34 range:34-339 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKKSSMMAPM TIMARVAAVL VLSSAAMASA AGAAGLDMNF YGSTCPRVEA IVKEEMVAIL KAAPTLAGPL LRLHFHDCFV RGCDASVLLD STPTSTAEKD ATPNLTLRGF GSVQRVKDRL
EEACPGTVSC ADVLALMARD AVVLANGPSW PVALGRRDGR VSLANETNQL PPPTANFTRL VSMFAAKGLS VRDLVVLSGG HTLGTAHCNL FSDRLYNFTG ANSLADVDPA LDAAYLARLR
SRCRSLADNT TLNEMDPGSF LSFDSSYYSL VARRRGLFHS DAALLTDPAT RAYVQRQATG LFTAEFFRDF ADSMVKMSTI DVLTGQQQGE IRKKCNLVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo, intron 1) and 32 ESTs. Cultivar="B73". |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAAGT CGTCGATGAT GGCGCCCATG ACGATCATGG CGAGAGTTGC CGCTGTGCTC GTCCTCTCGT CGGCTGCCAT GGCTTCCGCC GCAGGAGCAG CTGGGCTGGA CATGAATTTC
TACGGCAGCA CGTGCCCGCG CGTGGAGGCC ATCGTCAAGG AGGAGATGGT GGCGATCCTC AAGGCGGCGC CGACGCTGGC CGGCCCGCTG CTCCGCCTCC ATTTCCACGA CTGCTTCGTC
AGGGTATATA TATAACTATA TACATATATT GTTGCTGCAT TGATTAGTTG CATTGCATTG CACGTTAGCT AACTCATCCC CTGCATTATT ATTAATTATT AATTGCTGCC AGGGCTGCGA
CGCCTCCGTG CTCCTGGACT CGACTCCCAC CAGCACGGCG GAGAAGGACG CCACCCCGAA CCTCACCCTC CGGGGCTTCG GCTCCGTGCA GCGCGTCAAG GACCGGCTGG AGGAGGCGTG
CCCGGGCACC GTCTCCTGCG CCGACGTCCT GGCGCTCATG GCGCGCGACG CCGTCGTGCT GGCCAACGGC CCCTCCTGGC CCGTCGCGCT GGGCCGCCGC GACGGCCGCG TCTCCCTCGC
CAACGAGACC AACCAGCTGC CCCCGCCCAC CGCCAACTTC ACCCGCCTCG TCAGCATGTT CGCCGCCAAG GGCCTCTCCG TCAGGGACCT CGTCGTGCTC TCCGGCGGCC ACACCCTCGG
CACCGCGCAC TGCAACCTCT TCAGCGACCG CCTCTACAAC TTCACCGGCG CCAACAGCCT CGCCGACGTC GACCCGGCGC TCGACGCCGC CTACCTCGCC CGCCTCAGGT CCAGGTGCCG
GAGCCTCGCC GACAACACCA CGCTCAACGA GATGGACCCC GGCAGCTTCC TCAGCTTCGA CTCCAGCTAC TACAGCCTGG TGGCCAGGCG CCGGGGGCTC TTCCACTCCG ACGCCGCGCT
GCTCACCGAC CCGGCCACCA GGGCGTACGT CCAGCGCCAG GCCACGGGGC TCTTCACCGC CGAGTTCTTC CGCGACTTCG CCGACTCCAT GGTCAAGATG TCCACCATCG ACGTGCTCAC
CGGCCAGCAG CAGGGCGAGA TCAGAAAGAA ATGCAACCTC GTCAACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAAGT CGTCGATGAT GGCGCCCATG ACGATCATGG CGAGAGTTGC CGCTGTGCTC GTCCTCTCGT CGGCTGCCAT GGCTTCCGCC GCAGGAGCAG CTGGGCTGGA CATGAATTTC
TACGGCAGCA CGTGCCCGCG CGTGGAGGCC ATCGTCAAGG AGGAGATGGT GGCGATCCTC AAGGCGGCGC CGACGCTGGC CGGCCCGCTG CTCCGCCTCC ATTTCCACGA CTGCTTCGTC
AGGGGCTGCG ACGCCTCCGT GCTCCTGGAC TCGACTCCCA CCAGCACGGC GGAGAAGGAC GCCACCCCGA ACCTCACCCT CCGGGGCTTC GGCTCCGTGC AGCGCGTCAA GGACCGGCTG
GAGGAGGCGT GCCCGGGCAC CGTCTCCTGC GCCGACGTCC TGGCGCTCAT GGCGCGCGAC GCCGTCGTGC TGGCCAACGG CCCCTCCTGG CCCGTCGCGC TGGGCCGCCG CGACGGCCGC
GTCTCCCTCG CCAACGAGAC CAACCAGCTG CCCCCGCCCA CCGCCAACTT CACCCGCCTC GTCAGCATGT TCGCCGCCAA GGGCCTCTCC GTCAGGGACC TCGTCGTGCT CTCCGGCGGC
CACACCCTCG GCACCGCGCA CTGCAACCTC TTCAGCGACC GCCTCTACAA CTTCACCGGC GCCAACAGCC TCGCCGACGT CGACCCGGCG CTCGACGCCG CCTACCTCGC CCGCCTCAGG
TCCAGGTGCC GGAGCCTCGC CGACAACACC ACGCTCAACG AGATGGACCC CGGCAGCTTC CTCAGCTTCG ACTCCAGCTA CTACAGCCTG GTGGCCAGGC GCCGGGGGCT CTTCCACTCC
GACGCCGCGC TGCTCACCGA CCCGGCCACC AGGGCGTACG TCCAGCGCCA GGCCACGGGG CTCTTCACCG CCGAGTTCTT CCGCGACTTC GCCGACTCCA TGGTCAAGAT GTCCACCATC
GACGTGCTCA CCGGCCAGCA GCAGGGCGAG ATCAGAAAGA AATGCAACCT CGTCAACTGA
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Retrieve as FASTA
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