Entry information : AlyPrx33
Entry ID 7485
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-27 (Christophe Dunand)
Peroxidase information: AlyPrx33
Name AlyPrx33
Class Class III peroxidase    [Orthogroup: Prx040]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyPrx33
start..stop
S start..stop
AhalPrx39 697 0 1..349 1..355
CrubPrx107 676 0 8..349 12..353
AtPrx33 675 0 8..349 13..354
BrPrx34-1Ab_other 657 0 7..349 7..349
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7485' 'join(14156320..14156466,14161377..14161448,14161939..14162130,14162287..14162455,14162549..14163018)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14156320..14156466 145 N° 2 14161377..14161448 70 N° 3 14161939..14162130 190 N° 4 14162287..14162455 167
N° 5 14162549..14163018 468  
join(14156320..14156466,14161377..14161448,14161939..14162130,14162287..14162455 ,14162549..14163018)


exon

Literature and cross-references AlyPrx33
DNA ref. Phytozome 12:   scaffold_5 (14156320..14163018)
Protein sequence: AlyPrx33
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   349 (323)
PWM (Da):   %s   38375.33 (35488.9)  
PI (pH):   %s   6.87 (6.88) Peptide Signal:   %s   cut: 27 range:27-349
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQFSSFTWTILITLGCLMLRASLSDAQLTPTFYDTSCPNVTNIVR
DTIV
NELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFQTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVSLGRRDSLQAFLNLANANLPAPFF
TLPELKANFKKVGLDRPSDLVALS
GAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLV
RSFADGTEKFFDAFVEAMNRMGNITPTTGSQGQIRLNCRVVNSNSLLHDVVEIVDFVSSM

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 3 introns and 5')
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGTTCTCTTCATTCACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCGTGCGTCTCTGTCCGATGCTCAACTTACCCCTACCTTCTACGACACTTCATGTCCTAACGTC
ACCAACATTGTAAGAGATACCATTGTG
TGAACTGTAGTTTTACTCTTGACAGAGATAAAGAAGAGAGAAATACTCAAACTTTCATATTATTATCTCATTGAAAAACCCTAGTACAAGCTC
TCACTTTTATATAGACAGGAAGAACTATCTAGATCTTTGATGAGGTGTCAGGTGACAGCTATGACTCTAGATCCAATAGAGATGCGAATCTATTTGAGAGTTGCATTGGATGAGCTGTCT
CTGTCGTCTTCTTCCCATTGCTTTGGCGTGAGCTTGCTCTGCTTTCAGTCAACATTACCGTTGGAGCTTTGACTGACTGAACCTTGGACTGCTCTTGGGCTTTGTTGTTGTGAGCTGGCC
CAGTTGATGATGAGGCTTTAACATTCCCCCGCAAACTCGAGGTGGGTGGAAAGTCAACTCCGAGTTTGAATCTGAGGTCAAAGAAGCTGGCTTGTGGCAGAGGCTTTGTAAATATGTCAG
CGAGTTGCAGTGTCCCAGGAATGTGCTTGATGACCAGTGTTCCTTTAGCTACCATCTCTCTTGCATAGTGAAAGTGAGTGGCAAAGTGTTTACTTCTTGTATGCAGAACCGGGTTTGCTG
CCAAGTAGACTGCAGAAAGATTGTCACAATAAATTTCAGGAGGTTTCTCTTGTGGCAGTCCTATTTCTTGAACCAGAGCAGTGAGCCAAGACACTTCTGCAGCAGTATCTGAGAGGATTC
TGTATTCAGCTTCAGTTGAAGATCTTGCTACTGAATCCTGCCGTTTTGCAGACCAGGATATGATGTTAGACCCGAGAAACGTGCAAAAACCTCCAGTAGACCTCCTTGTTTCTTTGCAAC
CCGCATGATCACTGTCACTATATGCTCGAAGAGTTGAATCAGTTTCTGAAGTGAGCATCAGTCCCATCTTTACTGTTCCTTTCAAGTATCTGAGAACTCTTTTCAAGAGATTGAAATCTG
ACACTGATGGTTTATGCATCTTCTGACAAACGAAGTTTACTGCATATTGAATATCAGGTCTTGTTAAGGTCAGGTACTGCAATTTACCTGCCAATCTTCTGAAATAGGTTGGATCTTCAA
AAATTTTATCTTGATGAGGCAGTCTGTCTAGCTGAACAGGAAGTGGTGTAGGCATTGGAGCACAGTCCAACATACCTGCAGTTTGAAGAAGATCCAGAGCATATTTTTCTTGATTCATGA
ATAGACCTGTTGGTGTGAACTGAGCTTGAATTCCCAGAAAATACTTGAGAGGACCCATATCTTTCATCATAAACTTTTCATTCAGCTTACTTAGAAGCTTTGAAACTAGGCTTGAATCAT
TTCCAGTTAGAACCATATCATCCACATACATGAGCAACAACAACACACTCTGGTCTTGTTGAAAGATGAACAAAGATGGATCTCTTTGGCTGCATTTGAACCCAAACTCAATCAAATATG
AACTGAATTTGTCGAACCAGGCCCTTGGTGCCTGTTTAAGGCCATAAATGGCTTTATGAAGCAAACACACATGATCTGGTTTCTCTGAATCTTCAAAGCCAGGTGGTTGCCTCATGTAAA
CTGTTTCCTGCAATTCCCCATGTAAAAATGCATTCTTCACATCTAACTGTTTAATATCCCATCTTTCAGTTACTGCTGTGTGTAACACCATTCTTATTGTAGCTGTCCTTACTACAGGAC
TGTAGGTTTCCAGAAAGTCAATGCCTTCTTCCTGTTCATACCCTTTTGCTACTAATCTTGCTCTGAGTTTATCCAACGTCCCATCAGCATTTAGTTTTGTTTTGAATATCCATCTGCAAC
CCAAGAGATTTATGTCTGGGGTTCTGGGAACCAGACTCCAAGTGTTGGTAGCATGACAAGTTTCTATCTCTTCTTCACAAGCTGCTGTCCATCCCGGATGACTTAGAGCTTCTTGAATTG
ATTTTGGCTCCTCTGGTATCCCTTTTATAGTGAATAAGACATACCTAGGATTTGGTTTATGAATCCCGTGCTTCCCTCTGGTGATCATGGGATGTGTGGGTGCAGCTTGAGAAGTATCTG
ACTGTAAATCCTCAGAATTGACACAGCTTTGTTGTTGAGATTGTTGTTGTGGTGAGTGGTGCTCAGATTCTGTAACCTCTTGATGTGGTGGTGTCACTGTTTCTTGTTCTGTAGGAGTAT
ACACCAACTCTTCTTCCACTGTTCTGTCTTGCAGACACTCTTCGATTCTCTGAGCTGTACCCAATGACCATGCATGTAGCAGAGGAGTAGTTGCAGCAGACAGTAGATTCTTGTAAGTAT
CAGTATACGGAAATCTTGTTTCATCAAAGAGTACATGTCTACTAATGTAAACTCGACCTGTTGGAGGATGAAGACATCGATACCCTTTATACTTCTCTGTATAGCCAAGGAAAACACACA
GCAATGACTTGGGATCAAACTTATTTTCACTATACGGTCTTAAGTATGGATAACACGCACACCCAAAGACTCTTAGTGCAGTATAGACTGGGCGAGTACCATTCAAAACTTCAAAAGGAC
TCTGCATCTTTTCATGTGAGGAAGTTGGCAAGAGATTACTCAAGAAATTTGCAGTAAAGACAGCATCTACCCAGAGATTTTGTAGAAGATGACTGTGAAACAACATTGACATACCTAACT
CCATTATATGTCTATGCTTTCTTTCTGCAAGTCCATTTTGTTGAGGAGTATGAGGGCATGAAATGAAGTGTTGAATACCACAGACTTTGAAGTGATCATGTAGTGGTCTATTGACAAATT
CTCCTCCACCATCACTTTGAAAAATCTTGATTTTGTGATTAAACTGATTTTCCACAAGTGTTTGAAAGCTCTTAAAAACTTCAAAAACATCAGATTTCAACTTTAGAGGAAATAACCAAC
AAAATCTTGAGTAATTGTCTATGAATACAATGTAAAATCTGAAACCCTGAACTGAAGTGACTGGTGCAGGACCCCAAACATCACAATGTATCCTCTCAAGTGGTTGGCTTGCTTGAAACT
CTGATCTTGAAAAAGGTAGCTTGCATGTCTTTCCCAACTGACACGCTTCACACATTGACTTAGTAGTCTTATTGAATGAAATAGCATTAACTGAAGATAGGTGTTGCATAACTTGATGAT
GAGGATGCCCCAATCTCTTGTGCCAAATTACATCACTGGTAGTCTGTTGTCTGGATGAATAGAACGCCAAGAATTGAGGATTCTCCAACTTATACAAGCCTTTGATTTTGCTTCCCTGAC
TTAGAACTTGATTTGTCACTTTGTCCTTAACACACACAGATTCAGAGTCAAACTCAAACTTACAGGGATAATCATCTGTCAACTTAGACACTGACAATAAAGATTTTGCTATTTCTGGAC
ATACTAACACATCCTTAAGAGGTAAAGTGCCAGTGATACCTGGAAGGTTGATTGATCCAACATGAGTGATAGGCAAAAAGTCACCATTCCCCACTATGACAGCTTCTGTTCCATCATATG
GCTGACTAACATTCAGATTTGCAGGAGTATTCGTGATGTGGTGAGTTGCTGCTGAGTCAGGATACCAGCCTCCTCCAGGATACTGAGGTGAATCATTCAGTTTCATAGCCGCCATTGCTT
GAGGAAAGGTCTCTACTTCAGTCTGAAAATTTTCATCGAACCTTTTATAGCACTTATAAGCAGCATGACCGTATTTTCCGCATATCTGGCAAGTTGGACGTTGATCATTGGCTCCATAAT
TGTTTTTGTTGCTTCCTTGACCAAATTGTTGCGGAAAGCCTCGGCCTTGAGTGGTATAGGAGCTGTGACCTCGTGAACCACCCCTGTTTTGACCTCTTCCTCTACCAGAGTAGCCTCCTT
TAGCAGTATAGAAAGCTTTGTGTGAGTTTTCTTCCATAGCAGTATAGAAGGCTTGATGAGGATTCACTTCTGGTGGAGTTTCATACTTCTGCAGCTTGTCATCAAAGTTGGTGAGCTTGT
AAAGCACATCTTCGAAACTAGGACTTGTTGGAAGATCCATCGATTCCTCAATAACTGTGACTATAGACTCATATTCCCTACCAACACCAGACAAGACACCATAGATTTTCTCTTGTTCAG
AAATAGGAGCACCAATCGAGTCTAGTTGATCACAGAGTGCTTTGATTTCTGACAAGTACTGAGCCAGAGATCTGGTTCCTTTAGTGGTAGTCTGAATCTTCCTCTGAATGTCAAGTTTTC
TAGTAGCTGAAACCCGGTTATACTTCTTAGCGAGATAAAACCATACCTCCTGCGAAGATCTGAGACCGTAGACACTTTTGAGAGTGTCTTCAGACAGAGATCCAAAGATCCACGCCATAA
TGAGTTGATCGGTCTGCATCCATTTGAGAAACTCTGGATTGTTGGCCTCTGTGACTTGTTCTCCATTTCTGACAACCACCGTAGGAGGAGGACGAGCCAAAGCACCTGTGACATAGCCCA
GAAGCAACTGACTGTTGAGAAACTGCTCAAACTGAAGTTTCCAAGACAAGTAATTTGTATCATTTAGCTTGAGTGTGACACACTGAGAAATAGAAAGAGTAGCTGTAGTGACAGCAGAAG
GTTGTGCCGCCATGGCTCTGATACCATGTAGTTTTACTCTTGACAGAGATAAAGAAGAGAGAAATACTCAAGCTTTCATATTATTATCTCATTGAAAAACCCTAGTACAAGCTCTCACTT
TTATATAGACAGGAAGAACTATCTAGATCTTTGATGAGGTGTCAGGTGACAGCTATGACTCTAGATCCAATAGAGATGCGAATCTATTTGAGAGTTGCATTGGATGAGCTGTCTCTGTCG
TCTTCTTCCCATTGCTTTGGCGTGAGCTTGCTCTGCTTTCAGTCAACATTACCGTTGGAGCTTTGACTGACTGAACCTTGGACTGCTCTTGGGCTTTGTTGTTGTGAGCTGGCCCAGTTG
ATGATGAGGCTTTAACATGAACGAGCTAAGATCGGACCCTCGTATCGCCGGGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATATGTAAGATATCACTTTTCATATATGACA
CACTATGCAGTTAGTATAAGATTTTCTTAATAGTCTATTGAAATTTTACAAGATCATAAATACCAAAGTGAGATCTTATACAGATTTTTAAAAAGATTGCCTCAGTTTTCAACCAATGTG
CTACTATTTTTTCAAGAATATTTATTTCTATTATTTTATTAAATTTGTTATTTACTTTTAATATTTTAAAGTGATTATGTATACATATTTTGATAATATAAAAATATTTTTATTGAATAT
TTATTTTAGTGAGTTGAAATGGGTTAGAGGAGTTAATCTCTCCTCATATTGTTTTCATTAATTATATAGATATATAACCTTTACTCATTACTTGCCTCAGAGGAACAAATGGTTTTCATG
GATGAAAAAAGTTCAACGTTAAATTGTTACCTTTGGTAAGATTTAACTATGAGTGTAGTACATTGACTAATAATTTCTTAAATATATTTTGGTCTTTTGAAAGGGTTGTGATGCGTCAAT
CTTGTTAGACAACACGACATCATTTCAGACAGAGAAAGATGCGCTTGGAAATGCAAATTCAGCTCGGGGATTTCCCGTGATTGACAGAATGAAAGCCGCGGTAGAGAGGGCATGCCCAAG
AACCGTTTCGTGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTG
TGGTATGCTCCATTCTCCCATCTTCTTTTATTCATTACAAACATTTTTTCAAGAAACAGTGGAGA
CTAAAAAACTTTCCTTCTGAGTTTTGAGTGTGATATTTTTTTTTCTACAAAAGTAAATATTATTTTGAATATAATGGTGTTATTATACTATAGGCAGGAGGTCCTTCTTGGAAGGTTTCT
TTGGGGAGAAGAGACAGCTTACAAGCATTTCTAAATCTCGCTAATGCAAATCTCCCAGCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAACTTCAAAAAAGTTGGCCTCGATCGTCCT
TCTGATCTTGTTGCTCTCTCCG
CGGTAATTAACAAAAGGAAAATAAACCCCATTTGATATATTTGTAATTAGCGAGTTAATTGTTGATCTAATTATATATGGTCTTTCTTTTGTTAGGGG
CTCACACATTTGGTAAAAATCAATGTCGATTTATTATGGACCGATTATACAACTTTAGCAACACCGGATTACCTGACCCTACACTCAACACGACTTACCTACAAACTCTTCGTGGACAAT
GTCCTCGCAATGGTAATCAGAGTGTCTTAGTGGATTTCGATCTGCGTACGCCTTTAGTTTTCGACAACAAATACTATGTGAATCTCAAAGAGCAAAAAGGTCTTATCCAAAGCGATCAAG
AGTTGTTCTCTAGCCCCAATGCCACAGACACGATCCCCTTGGTGAGATCATTTGCTGATGGCACAGAAAAATTCTTTGATGCGTTTGTGGAGGCAATGAATAGGATGGGAAACATTACAC
CTACTACAGGATCTCAAGGACAAATCAGGTTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATGTGGTGGAGATAGTTGACTTTGTAAGCTCTATGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGTTCTCTTCATTCACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCGTGCGTCTCTGTCCGATGCTCAACTTACCCCTACCTTCTACGACACTTCATGTCCTAACGTC
ACCAACATTGTAAGAGATACCATTGTG
AACGAGCTAAGATCGGACCCTCGTATCGCCGGGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGTTGTGATGCGTCAATCTTG
TTAGACAACACGACATCATTTCAGACAGAGAAAGATGCGCTTGGAAATGCAAATTCAGCTCGGGGATTTCCCGTGATTGACAGAATGAAAGCCGCGGTAGAGAGGGCATGCCCAAGAACC
GTTTCGTGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTG
GCAGGAGGTCCTTCTTGGAAGGTTTCTTTGGGGAGAAGAGACAGCTTACAAGCATTTCTAAATCTCGCT
AATGCAAATCTCCCAGCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAACTTCAAAAAAGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCTCTCTCCG
GGGCTCACACATTTGGTAAA
AATCAATGTCGATTTATTATGGACCGATTATACAACTTTAGCAACACCGGATTACCTGACCCTACACTCAACACGACTTACCTACAAACTCTTCGTGGACAATGTCCTCGCAATGGTAAT
CAGAGTGTCTTAGTGGATTTCGATCTGCGTACGCCTTTAGTTTTCGACAACAAATACTATGTGAATCTCAAAGAGCAAAAAGGTCTTATCCAAAGCGATCAAGAGTTGTTCTCTAGCCCC
AATGCCACAGACACGATCCCCTTGGTGAGATCATTTGCTGATGGCACAGAAAAATTCTTTGATGCGTTTGTGGAGGCAATGAATAGGATGGGAAACATTACACCTACTACAGGATCTCAA
GGACAAATCAGGTTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATGTGGTGGAGATAGTTGACTTTGTAAGCTCTATGTGA

Retrieve as FASTA