View Redoxidase 7499

Entry information : AlyPrx59

Entry ID	7499
Creation	2010-08-10 (Christophe Dunand)
Last sequence changes	2010-08-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2010-12-24 (Marie Brette (Scipio))

Peroxidase information: AlyPrx59

Name

AlyPrx59

Class

Class III peroxidase [Orthogroup: Prx029]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis lyrata [TaxId: 59689 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AlyPrx59 start..stop	S start..stop
AhalPrx07	657	0	1..328	1..328
AtPrx59	630	0	1..328	1..328
BstrPrx86	625	0	1..328	1..328
TsPrx59	624	0	1..328	1..331

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	8408679..8408903	223	N° 2	8408354..8408536	181	N° 3	8407774..8407936	161	N° 4	8407274..8407689	414
complement(join(8407274..8407689,8407774..8407936,8408354..8408536,8408679..8408 903))

Literature and cross-references AlyPrx59

DNA ref.	Phytozome 12: scaffold_6 (8408903..8407274)

Protein sequence: AlyPrx59

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	328 (300)
PWM (Da):	35122.92 (32148.4)	Transmb domain:	i7-29o
PI (pH):	7.85 (6.73)	Peptide Signal:	cut: 29 range:29-328

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKTPTKVMGGHVLLTVFTLCMLCSGVRAQLSFDIYAKSCPNLVQI
VRRQVIIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGADSEKLAIPNINSARGFEVIDTIKDAVENACPGVVSCADILTLAARDSVFLSGGPQWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTF
GQAKCAVFSNRLFNFTGAGTPDATLETSLLSNLQTVCPLGGNSNTTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQNLFFRDFTCSMIRMGNIANGA
SGEVRKNCRVINN

Retrieve as FASTA

Remarks

complete sequence from genomic (chromo 6, 3 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAAACACCAACCAAAGTGATGGGAGGACATGTCTTGCTTACTGTATTCACTTTGTGTATGCTTTGTTCAGGGGTTAGGGCACAGCTAAGCTTTGACATTTATGCTAAATCGTGCCCC
AATCTTGTGCAAATTGTCCGTAGACAAGTTATAATTGCCCTGAAGGCCGAGATACGGATGGCTGCTTCCCTCATTCGTCTTCATTTCCACGACTGCTTTGTTAATGTATGTATTGTTATC
TCTACGTACTTTCTTCTAAATATATATTTTCTATTAAATAATTTTATAGGTTATAGGATATTGTTACATATTAATTTGTTCCAAACACTTCTCATCAGTAACCTAAAACGTAACTTGAAC
TTTTCAGGGGGGTGTGATGCGTCTGTATTGTTGGATGGAGCTGACAGCGAGAAACTCGCGATCCCAAACATTAATTCTGCGAGAGGGTTTGAAGTAATTGATACAATCAAAGACGCTGTG
GAAAACGCATGTCCTGGGGTTGTTTCTTGTGCTGATATCCTCACTTTGGCCGCTCGTGACTCGGTTTTCTTGGTAAGCCTTTCTGTCCCCATTTAACAACCATCAAAACCTTAATACATA
TATATTTTCAGGCAAATTCTCGATTAGATTTTACTAATTTCATATAAAAACTATTTCTAATATGACTTAGGTGTTGATTAGTTATATATAGTAACAAACAAAATGATTACGTTTTTACAA
ATGATTATCTTTTATTTGGTTGATATATATATATATATATATATATATATATATATATATATTGTCATAATGTGGTTGAAATATTTTTCAATGATTATAAACTCTATTATAAAAATATTT
GTGATTGTATATTTGTACGTAATTATATTTCTTCGGTCGTCTATGACTTACACATGCAGACTCTCGGGTTTATAAACCTGGATTATATCTATTCGTTTTTATATCGCCTATAACGGTTTC
AATTTGTAGAGAGCGGAGGGCCTCAGTGGAGAGTGGCATTAGGAAGAAAAGATGGATTGGTGGCAAATCAGAACAGTGCAAACAATCTCCCATCTCCTTTTGAACCTTTAGACGCTATTA
TCGCCAAATTTGTAGCCGTAAACCTTAACATCACCGACGTCGTAGCTTTATCAGGTTTAACTAGTTTCTTCAAACCTTAGTTGGTATTCTTTTCTTCTAACTACTTATCACTTATGTATG
ACCTTTTTCATTACAAAGGAGAGCTCACACCTTTGGACAAGCGAAGTGTGCTGTCTTCAGCAACCGTCTGTTCAACTTTACCGGTGCGGGAACTCCTGACGCAACACTTGAGACATCACT
GTTGTCTAATCTGCAAACAGTTTGTCCCCTTGGAGGAAATAGTAACACAACAGCGCCCCTTGACAGGAACTCTACGGACGCCTTTGACAACAATTATTTCAAGAACCTACTCGAAGGGAA
AGGTCTTTTGAGCTCTGATCAGATTCTGTTCTCGAGTGATTTAGCTGTGAACACAACAAAGAGACTAGTGGAGGCTTATAGTCGGAGCCAGAACTTGTTTTTCAGGGACTTCACATGTTC
GATGATCAGAATGGGAAACATTGCAAATGGAGCTAGTGGGGAGGTTAGGAAGAACTGCAGGGTTATCAATAATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA