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Entry information : AlyPrx34-1
Entry ID 7512
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyPrx34-1
Name AlyPrx34-1
Class Class III peroxidase    [Orthogroup: Prx040]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyPrx34-1
start..stop		 S start..stop
AhalPrx22 709 0 1..353 1..353
AtPrx34 686 0 1..353 1..353
BstrPrx03 666 0 1..353 1..353
BrPrx34-1Ab_other 663 0 7..353 3..349
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7512' 'join(14173608..14173838,14174520..14174711,14175173..14175341,14175430..14175899)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14173608..14173838 229 N° 2 14174520..14174711 190 N° 3 14175173..14175341 167 N° 4 14175430..14175899 468
join(14173608..14173838,14174520..14174711,14175173..14175341,14175430..14175899 )


exon

Literature and cross-references AlyPrx34-1
DNA ref. Phytozome 12:   scaffold_5 (14173608..14175899)
Protein sequence: AlyPrx34-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (323)
PWM (Da):   %s   38660.47 (35421.9)  
PI (pH):   %s   6.97 (6.74) Peptide Signal:   %s   cut: 31 range:31-353
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLSSSSTSFTWTTIITLGCLLLHSSLSYAQLTPTFYDSSCPNVT
NIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLNLANANLPAPFFTLPELKASFKNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNI
TPTTGTQGQIRLNCRVVNSNTLLQDVVEIVDFVSSM

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 3 introns),
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATTTATCTTCGTCTTCTACATCGTTCACTTGGACAACCATAATCACATTGGGATGTCTTTTGCTTCATTCATCTTTGTCCTATGCTCAACTTACCCCTACCTTCTACGATAGTTCA
TGTCCTAACGTCACTAACATCGTACGAGAAACCATTGTAAATGAGTTAAGGTCGGACCCTCGTATCGCTGCGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATATGTAAGAT
ATTACTTTTCATATATCTATAGCGTTGCGGATTACTGTGGTTCATCTTTTAAATATTAATAAATCTGTGTAAAAGTAGAAAAAAAAAAGTGATAATAAATGTCTTTAGACTCTTAGTTAA
TGACTAAATTTTTGCACTAAAGCCTAAATTTCACGTAGTTCGATGTCATTTGTTGCTACTTTACGTTTTCTATATTGAAAATTAATACTACTCGTCGACAGTGATGTTACTGGTTAGTTA
TTAATTTCTTACACTATGATGATGCCAAAACATTTATGCAATCGGCTTCACGAAAATGAAGTATCCGTGTTTGAATTGCATGGTGCCGTACCAAACACGATAGAAATTTAAGATCCATCA
ATCATTTATATTTTGTTGAGGGATATATATATATATATTAAAAAGATATTTTTCAAATCAATCAAAAATCATGATTATTAATTTCTATTATTCAATTCAATTTTGATTAGTTTCAATATT
TTAATGTGATTATGTATAAATATTCATCAATATACAAAATATTTTTGTTGAAAAGTGTTTTATTTTCTATTGAGTTCAAATGTTTCTGATCACTTTGTTTTCATTACATAGATATATAAC
CTTCACTGGTTACTTGCTTCAGAAGAACAAATGATTTTAGTGATCAATGACAAAAAGTTTTTACTATGGTAAAGGGCTGTGACGCATCCATCTTGTTAGACAACACGACATCATTTCGAA
CAGAGAAAGATGCCTTTGGAAACGCAAATTCGGCTCGAGGATTTCCTGTGATTGATAGAATGAAAGCCGCGGTGGAGAGGGCATGCCCAAGAACCGTTTCGTGCGCAGATATGCTCACCA
TTGCAGCTCAACAATCTGTCACTTTGTGGTATGCTCCATTTTTCTTTTATTCATTACAAACACTGTTTTCAGTTTTAATGTCAACTTTGAATAGCCGCTTTATCAAACATGCGAACCTAA
GTTTGAAAAGAAAAATAACTGGGATATTTTTAGTTGTTTGAGAACGTCACAATCTATATTTTAGTAACAACTTTTTAACTATATGACAAGTATTCAATGTTAATTGAGAAAAGCGCGTGG
TCCCGTCAAGAAAATTTGACAAAATTAGGTTTTTTATCACTAGTTTCGATATCATATTAACCCAAAAGAATACTTTTCAACATTTTCCCAAGAAATAGTGGAGATATAAAAAGTTACTTT
TATGTATATATATCTAATCAGTGAATTTATAATACATGACCGTCTTTTTCTTTTTACATATTAAAACTTCCGGATGATAAAAATAATCTCAAGAAATATTATCTTAATATAATGGTTATT
ATACTATAGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGAAGGAGAGACAGCTTACAAGCATTTCTAAATCTCGCTAATGCAAATCTCCCAGCTCCATTCTTCACACTTCCAGAGCTT
AAAGCCAGCTTCAAAAATGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCTCTCTCCGCGGTAATTAACAAAAGAAAATTAAACACCATTGATACAATATCAATTAGCGAGTTTATTACT
AATCTAATTATGGTATTTGTTTTGTTAGGTGGTCACACATTTGGTAAAAATCAATGTCAGTTTATTCTGGACAGATTATACAATTTCAGCAACACAGGTTTACCCGACCCTACCCTCAAT
ACTACTTACCTCCAAACTCTTCGTGGACTATGCCCCCTTAATGGCAATCGAAGTGCCTTGGTCGATTTTGATCTGCGTACGCCTACAGTTTTCGACAACAAATACTACGTAAATCTCAAA
GAGCAAAAAGGTCTTATCCAGAGCGATCAAGAGTTGTTCTCTAGCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTTGTG
GAGGCGATGAATAGGATGGGAAACATTACACCTACTACAGGAACTCAAGGACAAATCAGGTTGAATTGTAGGGTGGTGAACTCCAACACTCTGCTCCAAGATGTGGTGGAGATCGTTGAC
TTTGTTAGCTCTATGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATTTATCTTCGTCTTCTACATCGTTCACTTGGACAACCATAATCACATTGGGATGTCTTTTGCTTCATTCATCTTTGTCCTATGCTCAACTTACCCCTACCTTCTACGATAGTTCA
TGTCCTAACGTCACTAACATCGTACGAGAAACCATTGTAAATGAGTTAAGGTCGGACCCTCGTATCGCTGCGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGCTGTGAC
GCATCCATCTTGTTAGACAACACGACATCATTTCGAACAGAGAAAGATGCCTTTGGAAACGCAAATTCGGCTCGAGGATTTCCTGTGATTGATAGAATGAAAGCCGCGGTGGAGAGGGCA
TGCCCAAGAACCGTTTCGTGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGAAGGAGAGACAGCTTACAAGCATTT
CTAAATCTCGCTAATGCAAATCTCCCAGCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAGCTTCAAAAATGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCTCTCTCCGGTGGTCAC
ACATTTGGTAAAAATCAATGTCAGTTTATTCTGGACAGATTATACAATTTCAGCAACACAGGTTTACCCGACCCTACCCTCAATACTACTTACCTCCAAACTCTTCGTGGACTATGCCCC
CTTAATGGCAATCGAAGTGCCTTGGTCGATTTTGATCTGCGTACGCCTACAGTTTTCGACAACAAATACTACGTAAATCTCAAAGAGCAAAAAGGTCTTATCCAGAGCGATCAAGAGTTG
TTCTCTAGCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTTGTGGAGGCGATGAATAGGATGGGAAACATTACACCTACT
ACAGGAACTCAAGGACAAATCAGGTTGAATTGTAGGGTGGTGAACTCCAACACTCTGCTCCAAGATGTGGTGGAGATCGTTGACTTTGTTAGCTCTATGTGA

Retrieve as FASTA