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Entry information : AlyRboh09 (AlyRbohI)
Entry ID 7577
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-10 (Catherine Mathe)
Peroxidase information: AlyRboh09 (AlyRbohI)
Name (synonym) AlyRboh09 (AlyRbohI)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh09
start..stop		 S start..stop
AtRboh09 1665 0 1..934 1..941
TsRboh09 1642 0 1..934 1..938
NoffRboh09-1B 1597 0 1..934 1..943
ThasRboh09 1217 0 1..934 1..918
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20872885..20873494 608 N° 2 20872644..20872809 164 N° 3 20872517..20872562 44 N° 4 20872017..20872136 118
N° 5 20871172..20871579 406 N° 6 20870696..20871082 385 N° 7 20870515..20870610 94 N° 8 20870294..20870409 114
N° 9 20869996..20870163 166 N° 10 20869754..20869913 158 N° 11 20869463..20869672 208 N° 12 20869256..20869384 127
N° 13 20869088..20869166 77 N° 14 20868899..20869008 108  
complement(join(20868899..20869008,20869088..20869166,20869256..20869384,2086946 3..20869672,20869754..20869913,20869996..20870163,20870294..20870409,20870515..2 0870610,20870696..20871082,20871172..20871579,20872017..20872136,20872517..20872 562,20872644..20872809,20872885..20873494))


exon

Literature and cross-references AlyRboh09 (AlyRbohI)
DNA ref. Phytozome 12:   scaffold_6 (20873494..20868899)
Protein sequence: AlyRboh09 (AlyRbohI)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   934
PWM (Da):   %s   106609.02 Transmb domain:   %s   o367-384i501-523o549-571i580-597o
PI (pH):   %s   8.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSMSFSGGTHDDRWGSDLTSAGEFTQSFPSFPATYSPSDGEELVEVTIEFPSGVLLNIESVTSTDPEITSCSASDSGSKSHSFGWSASSSRRISEFHTVEKAKKFSRDLKEKLQRISLGY
SSRSAPEPVVPNVVDFTDPAVLCRSLTQRLTKSNGSCTERAINALKFISSKDNRIANWRDVQNNFANLSKDGYLCRSDFANCIGLENENSKEFADELFDAMCRRRRLMVDKINLQELYEF
WYQITDESFDSRLQIFFDMVKNGDGRITENEVKIIILSASANNLLRLRERAEEYAALIMEELAPDGLYSQYIELKDLEMLLLEKDISHSYSQPFSQTSRALSQNLKDTRWGISRNLLYSL
QDNWKRIWVLTLWLVIMGWLFMWKCYQYKRKDAFHVMGYCLVMAKGAAETLKFNMALILLPVCRNTITYLRSTALCHSVPFDDCINFHKTISVAIIIAMLLHASSHLACDFPRILTSTET
DYKRYLVKYFGITRPTYFDLVNSPVGITGFIMVAFMVIAFILASRRCRRNLTKLPKPFDKLTGYNAFWYSHHLLLTVYVLLVIHGVSLYLEHKWYRKTIWMYLAVPVLLYIGERILRFFR
SRLYTVEICKVVIYPGNVVVLRMTKPTSFDYKSGQYVFVQCPAVSKFEWHPFSITSSPGDDYLSIHIRQRGDWTEGIKKAFSVVCQAPEAGKSGLLRADGPNQRSFPELLIDGPYGAPAQ
DHWKYDVVLLVGLGIGATPFVSILRDLLNTIVKQQEQECLSGSCSNSNISSDHSFSCLNSEARSRIPQTQRKTLNTKNAYFYWVTREQGSFDWFKDIMNEIADSDRKGVIEMHNYLTSVY
EEGDTRSNLLTMIQTLNHAKNGVDIFSGTKVRTHFGRPKWKKVLSKISTKHRNARIGVFYCGVPSLGKELSTLCHEFNQTGISRFEFHKEQF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 12 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAATGTCATTTTCCGGCGGGACTCACGACGATCGTTGGGGTTCCGATTTGACTTCCGCCGGAGAATTTACCCAAAGCTTTCCATCGTTTCCAGCAACTTACTCACCTTCCGACGGC
GAAGAGCTCGTAGAAGTAACAATCGAATTCCCAAGCGGCGTACTATTAAACATCGAATCTGTTACCAGCACCGATCCAGAGATTACCTCTTGCTCTGCTTCTGATTCAGGATCAAAATCG
CATAGTTTCGGATGGAGCGCGTCGTCGAGTCGTCGGATCTCAGAGTTTCATACGGTGGAGAAGGCGAAAAAGTTCTCTAGAGATCTGAAAGAAAAGCTTCAAAGGATCTCATTGGGATAT
TCGTCTCGGTCTGCACCGGAGCCGGTGGTTCCTAATGTAGTAGATTTTACGGATCCTGCTGTTCTCTGTCGCTCTTTAACACAACGATTAACAAAGTCTAATGGATCGTGTACAGAGAGA
GCGATTAATGCTTTGAAATTCATAAGCAGCAAAGACAATCGAATCGCTAATTGGAGAGATGTTCAAAACAATTTCGCTAATCTTTCTAAAGATGGTTATCTTTGTCGAAGTGATTTTGCT
AATTGCATAGGTTCGACATTATTTCACATTTCTGATGAGTATATTGATTGATTAGTTTGACATTTGGTTGTTTTGTGTTTGAAAGGTGTTTGGAGAATGAAAATTCGAAAGAATTCGCAG
ATGAGTTGTTCGACGCAATGTGTAGGAGAAGAAGATTAATGGTTGATAAGATCAATCTTCAAGAACTATATGAGTTTTGGTACCAAATTACTGACGAAAGCTTCGATTCTCGTCTCCAAA
TCTTCTTCGACATGTATTGATCATTTAATTAATATACTGATACACTTCTTCAACATGTAGTTAAGTTCTTGATTTGTTTTCTTGAAAATTGCAGGGGGTTAAAAATGGAGATGGTCGAAT
CACAGAGAATGAAGTAAAAGAGGTGACTTATTTAGTATTCTAATCAGCATTGACTACGTATAACTAATGAATCTTACATGAGTGCCATTATCTTATATTTTTAGTATTGTATTATCCCTC
TTGCTGAATTTTTTAGTTGGTTATGTTGGTCTTGATATGATTACATCTTATGTATTCTTTCTAAACCAATTAATGCAAGAATAGAAAACATAAGTTGCAATTGTTTTTTCTGCATAATAT
TTGATTGACCTTGTAGTATCTTTTCTTAATTTAAGGAAGTGTTCTAACTACCAATGAGAAGATATTGTTTTTCTATATAACCACTAAGTTTACGTTGAATCTTTCTAATAGAAGCTTCCT
TTGGGCATTAACTTCTTTTTGTATGATTTTGACAACATATAGATATCATTATACTAAGTGCATCAGCAAATAATCTATTGAGGTTAAGAGAACGAGCAGAGGAATATGCAGCACTGATCA
TGGAAGAACTTGCACCGGATGGGCTCTATTCTCAGTACATAGAGGTGGTTCCATCACTTTTTAAGTAATATCACAATCTTGTAGATCAGTCTCTTTCTATGAGAGAGAGTAGAAGGGTTC
TTTGTTAAGTTTGACCTTAGTAATTGATGACGTTGAGCTCTCTTACCTTCCAAGTACTCTGATGATAGAGACATTTGACCGAGTCAAAAACCAATGAGCTTAAAGTTATGTGCTATGCAA
GTTTCTTTTTGTATGGAATTAATATAAGAAAAGGTTGACGAAGACAAAAAAAGTAGAGGTCCACATATAGAGCTTGAACAAATATTGTTCTCAAAATAATTTCTAGTGGTATAGTGGCGT
TTCAGTTATAGTAACAAATATTGTCAGAGAGAGTGCCCACTTGTTTGAATATTTTTCTCCTGCTTGAGACTGAAACAACATTCTAATATGTTGTCTTTGTTATGGATTTGGAATGATGCA
GTTTTAAAGGACCTAGAGATGCTACTACTAGAGAAGGACATATCTCATAGTTACAGCCAACCGTTCAGTCAGACGAGCCGAGCCTTAAGCCAAAACCTAAAGGATACAAGATGGGGAATA
AGTAGGAACTTGCTTTACTCTTTGCAAGACAATTGGAAGAGGATTTGGGTTTTGACATTGTGGTTAGTGATCATGGGCTGGTTGTTTATGTGGAAATGCTATCAGTACAAACGCAAAGAC
GCATTCCATGTAATGGGTTACTGCCTTGTCATGGCGAAAGGTGCAGCTGAGACACTGAAATTCAATATGGCTCTTATCCTTTTGCCGGTCTGTAGAAATACCATCACCTATCTCAGATCC
ACCGCTTTGTGCCACTCAGTGCCTTTCGATGACTGCATTAATTTTCACAAGGTTAATCAAAAACCATTTTGTCTTGCCTTTCTTATGAAAGACAATATGTTTCAGCTGAATCTTACTTTC
CGGTTTTTGCTTAAGCGCAGACACGATCTCTGTAGCAATCATTATTGCAATGCTTCTTCATGCATCCAGCCACCTCGCTTGTGACTTCCCGAGGATTCTAACATCTACTGAGACTGATTA
CAAAAGATACTTGGTTAAGTACTTTGGTATTACCAGACCCACATACTTTGACTTGGTGAATAGTCCTGTAGGAATCACTGGTTTTATAATGGTTGCTTTTATGGTAATTGCATTCATATT
AGCCAGTCGAAGATGCAGGCGGAACCTTACTAAGTTGCCAAAGCCATTTGACAAACTAACCGGATATAATGCCTTCTGGTATTCACATCACTTACTTCTAACTGTTTACGTCCTTTTAGT
CATCCACGGTGTTTCCCTCTATCTCGAGCATAAATGGTACCGCAAAACGGTAAATTCCATAAACTTTTTACCATTACTTTTTGCATTCTTACATAATTTTCTGTAAAAACAATAACATAT
ACTGCCTCCTTCAGATATATGGATGTATCTTGCTGTACCAGTTTTACTCTATATTGGTGAAAGGATCCTTAGATTTTTTCGTTCCAGGCTTTACACCGTTGAAATCTGCAAGGTAAAGTC
TCACTACAATTACATTTTGAACTGAATCACATGGAAAGACACATTGTCAATCATCTTCCGCTATCTTTATATATCAATTCAAATGATTTGGTCTTAGGTGTTGTAATTTATCCCGGAAAC
GTTGTTGTACTACGCATGACTAAGCCTACATCATTTGATTACAAGAGCGGACAATATGTATTTGTTCAGTGTCCTGCAGTGTCAAAATTTGAGTGGTGAGTGTTTTTATAGTGAGCCAAC
ACAAGCCTAATAGCTTATTTTGCAATCTAAGAATATATACAAACTCTGTTCTTTGACACCACAAAGAGTAACTTAAAGATTCTTGGTCCTAAACTCCATCTCCAGGCGCATCCATTTTCT
ATTACGTCTTCCCCTGGAGATGATTATCTCAGCATTCACATTCGCCAGCGTGGTGATTGGACAGAAGGGATTAAGAAGGCATTCTCAGTGGTATGTCAAGCCCCTGAAGCTGGAAAAAGC
GGACTTCTCAGAGCAGACGGACCAAACCAAAGAAGGTACATACATTTTATAGATTTCCATATACTATTAACTTGCATTCTCAGAATGTGAATTTTGATATTATCTCTTGTAATTTAGTTT
TTTCCAGAGCTGTTGATAGATGGACCTTATGGCGCTCCAGCGCAAGACCATTGGAAGTATGATGTGGTACTACTCGTTGGCCTTGGAATCGGCGCAACACCTTTCGTTAGCATTTTGAGA
GATCTACTCAACACCATTGTTAAGCAACAAGAACAAGCTGTGAGTATAAACTTTAAAAATCCCTGTTGTTGAGTAACAGACTCTTAACTAACTTTTTTTTGTGTTATGTTATATTTTCAG
GAGAATGCCTCTCAGGTAGTTGTAGTAACAGCAACATCTCATCTGATCACAGTTTCAGTTGCTTAAACTCGGAAGCTCGGAGTCGGATTCCCCAAACTCAACGGAAGACGTTGAATACTA
AGAACGCTTACTTTTATTGGGTAACACGAGAACAAGGCTCGTTCGATTGGTTCAAAGATATCATGAACGAAATTGCTGATTCAGATAGAAAGGTAATATACACTTATTCATGTAAATTCA
AAAGATTGAAGTTAGTCACTGACATATTTGTCTTTGTGAACAAATAAAAGGGGGTGTTATTGAGATGCACAACTACTTGACTAGCGTCTACGAAGAAGGAGATACTCGATCCAATCTTCT
CACCATGATCCAAACGCTAAACCACGCTAAAAATGGCGTCGACATATTTTCTGGAACCAAGGCAATTAATAATCTTTAACGATTACATTTATGATCTTATACAAACAACAATTGATTTCT
GATCTTGTATACAACTTTTGGTTATTTTAGGTGTAAGGACACATTTTGGGAGGCCAAAATGGAAGAAAGTTTTATCAAAGATTAGCACCAAACATAGGAACGCAAGAATTGGTACGTTAC
ACAAGAATCAACTCAAAGAAATTATAATCGAGTCGGTATTTGCCTTGTCTAAAGAATTTGTTTTGATTAGGAGAGTGTTCTATTGTGGAGTACCGAGTTTGGGGAAGGAACTTTCTACAC
TCTGCCATGAATTTAACCAGACGGGAATTTCCAGGTTCGAGTTCCACAAAGAACAGTTCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAATGTCATTTTCCGGCGGGACTCACGACGATCGTTGGGGTTCCGATTTGACTTCCGCCGGAGAATTTACCCAAAGCTTTCCATCGTTTCCAGCAACTTACTCACCTTCCGACGGC
GAAGAGCTCGTAGAAGTAACAATCGAATTCCCAAGCGGCGTACTATTAAACATCGAATCTGTTACCAGCACCGATCCAGAGATTACCTCTTGCTCTGCTTCTGATTCAGGATCAAAATCG
CATAGTTTCGGATGGAGCGCGTCGTCGAGTCGTCGGATCTCAGAGTTTCATACGGTGGAGAAGGCGAAAAAGTTCTCTAGAGATCTGAAAGAAAAGCTTCAAAGGATCTCATTGGGATAT
TCGTCTCGGTCTGCACCGGAGCCGGTGGTTCCTAATGTAGTAGATTTTACGGATCCTGCTGTTCTCTGTCGCTCTTTAACACAACGATTAACAAAGTCTAATGGATCGTGTACAGAGAGA
GCGATTAATGCTTTGAAATTCATAAGCAGCAAAGACAATCGAATCGCTAATTGGAGAGATGTTCAAAACAATTTCGCTAATCTTTCTAAAGATGGTTATCTTTGTCGAAGTGATTTTGCT
AATTGCATAGGTTTGGAGAATGAAAATTCGAAAGAATTCGCAGATGAGTTGTTCGACGCAATGTGTAGGAGAAGAAGATTAATGGTTGATAAGATCAATCTTCAAGAACTATATGAGTTT
TGGTACCAAATTACTGACGAAAGCTTCGATTCTCGTCTCCAAATCTTCTTCGACATGGTTAAAAATGGAGATGGTCGAATCACAGAGAATGAAGTAAAAGAGATCATTATACTAAGTGCA
TCAGCAAATAATCTATTGAGGTTAAGAGAACGAGCAGAGGAATATGCAGCACTGATCATGGAAGAACTTGCACCGGATGGGCTCTATTCTCAGTACATAGAGTTAAAGGACCTAGAGATG
CTACTACTAGAGAAGGACATATCTCATAGTTACAGCCAACCGTTCAGTCAGACGAGCCGAGCCTTAAGCCAAAACCTAAAGGATACAAGATGGGGAATAAGTAGGAACTTGCTTTACTCT
TTGCAAGACAATTGGAAGAGGATTTGGGTTTTGACATTGTGGTTAGTGATCATGGGCTGGTTGTTTATGTGGAAATGCTATCAGTACAAACGCAAAGACGCATTCCATGTAATGGGTTAC
TGCCTTGTCATGGCGAAAGGTGCAGCTGAGACACTGAAATTCAATATGGCTCTTATCCTTTTGCCGGTCTGTAGAAATACCATCACCTATCTCAGATCCACCGCTTTGTGCCACTCAGTG
CCTTTCGATGACTGCATTAATTTTCACAAGACGATCTCTGTAGCAATCATTATTGCAATGCTTCTTCATGCATCCAGCCACCTCGCTTGTGACTTCCCGAGGATTCTAACATCTACTGAG
ACTGATTACAAAAGATACTTGGTTAAGTACTTTGGTATTACCAGACCCACATACTTTGACTTGGTGAATAGTCCTGTAGGAATCACTGGTTTTATAATGGTTGCTTTTATGGTAATTGCA
TTCATATTAGCCAGTCGAAGATGCAGGCGGAACCTTACTAAGTTGCCAAAGCCATTTGACAAACTAACCGGATATAATGCCTTCTGGTATTCACATCACTTACTTCTAACTGTTTACGTC
CTTTTAGTCATCCACGGTGTTTCCCTCTATCTCGAGCATAAATGGTACCGCAAAACGATATGGATGTATCTTGCTGTACCAGTTTTACTCTATATTGGTGAAAGGATCCTTAGATTTTTT
CGTTCCAGGCTTTACACCGTTGAAATCTGCAAGGTTGTAATTTATCCCGGAAACGTTGTTGTACTACGCATGACTAAGCCTACATCATTTGATTACAAGAGCGGACAATATGTATTTGTT
CAGTGTCCTGCAGTGTCAAAATTTGAGTGGCATCCATTTTCTATTACGTCTTCCCCTGGAGATGATTATCTCAGCATTCACATTCGCCAGCGTGGTGATTGGACAGAAGGGATTAAGAAG
GCATTCTCAGTGGTATGTCAAGCCCCTGAAGCTGGAAAAAGCGGACTTCTCAGAGCAGACGGACCAAACCAAAGAAGTTTTCCAGAGCTGTTGATAGATGGACCTTATGGCGCTCCAGCG
CAAGACCATTGGAAGTATGATGTGGTACTACTCGTTGGCCTTGGAATCGGCGCAACACCTTTCGTTAGCATTTTGAGAGATCTACTCAACACCATTGTTAAGCAACAAGAACAAGCTGAA
TGCCTCTCAGGTAGTTGTAGTAACAGCAACATCTCATCTGATCACAGTTTCAGTTGCTTAAACTCGGAAGCTCGGAGTCGGATTCCCCAAACTCAACGGAAGACGTTGAATACTAAGAAC
GCTTACTTTTATTGGGTAACACGAGAACAAGGCTCGTTCGATTGGTTCAAAGATATCATGAACGAAATTGCTGATTCAGATAGAAAGGGTGTTATTGAGATGCACAACTACTTGACTAGC
GTCTACGAAGAAGGAGATACTCGATCCAATCTTCTCACCATGATCCAAACGCTAAACCACGCTAAAAATGGCGTCGACATATTTTCTGGAACCAAGGTAAGGACACATTTTGGGAGGCCA
AAATGGAAGAAAGTTTTATCAAAGATTAGCACCAAACATAGGAACGCAAGAATTGGAGTGTTCTATTGTGGAGTACCGAGTTTGGGGAAGGAACTTTCTACACTCTGCCATGAATTTAAC
CAGACGGGAATTTCCAGGTTCGAGTTCCACAAAGAACAGTTCTAA

Retrieve as FASTA