Entry information : AlyRboh01 (AlyRbohA)
Entry ID 7581
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Bruno Savelli
Last annotation changes 2015-12-16 (Bruno Savelli)
Peroxidase information: AlyRboh01 (AlyRbohA)
Name (synonym) AlyRboh01 (AlyRbohA)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh01
start..stop
S start..stop
AtRboh01 1748 0 1..897 2..902
NoffRboh01-1B 1597 0 7..897 2..895
NoffRboh01-1A 1558 0 7..897 2..886
TsRboh01 1548 0 6..897 1..907
Gene structure Fichier Exons


exon

Literature and cross-references AlyRboh01 (AlyRbohA)
DNA ref. Phytozome 12:   scaffold_6 (2893582..2889897)
Protein sequence: AlyRboh01 (AlyRbohA)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   897
PWM (Da):   %s   102329.57 Transmb domain:   %s   o340-359i479-501o521-543i704-721o
PI (pH):   %s   9.66
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNRSEFQKLGFENVRYYTETPYGGQSSASTSRYYGEDEPYVEITLDIHEDSVSVYGMKSPDHRGAGSIYEDQSLLRQGRSGRSNSVLKRLASSVSTELKRVASSVSSSSARKPPRPQIAR
LRRSKSRAEQALKGLKFITKTDGVTGWPEVEKRFYVITMTTNGLLHRSKFGECI
GMKSTEFALALFDALARRENVSGDLINMNELKEFWKQITDQDFDSRLRTFFAMVDKDSDGRLNEAE
VR
IITLSASANELDNIRRQAEEYAALIMEELDPYHYGYIMIENLEILLLQAPMPDVRDGESKKLSKMLSQNLMVPQSRNLGARFCRGMKYFLFDNWKRVWVMALWIGAMAGLFTWKFMEY
RKRSAYQVMGVCVCIAKGAAETLKLNMAMILLPVCRNTITWLRTKTKLSAIVPFDDSLNFHK
VIAIGISIGVGIHATSHLACDFPRLIAADEDEYKPMEMYFGPQTKRYLDFVQSVEGVT
GIGMVILMTIAFTLATTWFRRNKLNLPGPLKKITGFNAFWYSHHLFVIVYSLLVVHGFYVYLIIKPWYKKT
TWMYLMVPVVLYLFERLIRAFRSSVEAVSVLKVAVLPGNVLSLHLSRPT
NFRYKSGQYMYLNCSAVSTLE
WHPFSITSAPGDDYLSVHIRVLGDWTKELRSLFSVCKPRPPDENRLNRADSRDWDNIPNFPRILIDGPYGAPAQDYKKFEVLLLVGLGIGATPMISIVK
DIINHLKGVEEGSNRRQSPIHNMVTPPVSPSRKSETFITKRAYFYWVTREQGSFDWFKNVMDEVTETDRNKVIELHNYCTSVYEEGDARSALITMLQSLNHAKHGVDVVSGTRVMSHFAR
PNWRSVFKRIAVNHPKTK
GVFYCGAAGLVKELRHLSLDFSHKTSTKFTFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 8, 11 introns).
DNA
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CDS
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