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Entry information : CorAPx01
Entry ID 7670
Creation 2010-10-28 (Qiang Li)
Last sequence changes 2010-12-08 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-23 (Qiang Li)
Peroxidase information: CorAPx01
Name CorAPx01
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorAPx01
start..stop		 S start..stop
CscAPx04 553 0 9..290 3..284
CorAPx02 485 2.47e-175 2..290 7..296
CglobAPx02 448 4.81e-160 22..290 84..352
CirAPx01 431 2.1e-154 23..290 1..268
Literature and cross-references CorAPx01
Literature Timme,R.E. and Delwiche,C.F.Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra(Zygnematales) transcriptomes. BMC Plant Biol. 10 (1), 96 (2010)
EST ref. GenBank:   GW592376.1 [3' end]  GW593057.1 [Fragment]
Protein sequence: CorAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290 (301)
PWM (Da):   %s   31096.79 (31961.8)  
PI (pH):   %s   6.26 (5.11) Peptide Signal:   %s   cut: 30 range:30-330
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LHLEKSLRRS LSARMAAVTP TVEQLKGAKQ AISDIIKSTS SNPILIRLGW HDAGTYDKDV SEWPKCGGAN GSLFYDIVQK HGANAGLNSA VKLLEPVKAA YPSVSWADLF QMAGATAVEL  AGGPQIDMKY GRVDVSSAED AVKEGNLPAA TPPSPPDHLR AVFYRMGLDD KDIVALSGAH TLGRAYPSRS GLGVAETKYT KDGPGTKGGQ SWTAEWLKFD NSYFKDVKEK KDADLLVLPT 
DAALFEDPGF KVYAEKYAED QGAFFSDYAV SHKKLSELGS KFEPAEGISI 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs. 5' end is missing. Strain="UTEX 2651".
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTACATTTGG AAAAGAGCCT GCGAAGATCC TTGTCTGCAA GAATGGCCGC GGTCACACCA ACTGTCGAGC AGTTGAAGGG AGCCAAGCAA GCCATTTCCG ATATCATCAA GAGCACGAGT  AGCAATCCCA TCCTGATTCG CCTGGGGTGG CATGATGCAG GCACATACGA CAAGGATGTA AGCGAGTGGC CCAAATGTGG TGGAGCTAAT GGCAGCCTTT TCTACGACAT TGTGCAAAAG  CATGGAGCAA ATGCAGGTTT GAACAGTGCC GTGAAGCTGT TGGAGCCTGT GAAGGCTGCT TATCCGTCTG TCAGCTGGGC TGACCTGTTC CAGATGGCAG GTGCAACTGC AGTTGAGCTT  GCTGGAGGGC CACAAATCGA TATGAAGTAC GGCCGAGTTG ATGTATCGAG TGCTGAGGAC GCTGTGAAGG AAGGCAACCT TCCAGCTGCC ACCCCTCCAT CACCACCCGA TCATCTCAGG  GCTGTTTTCT ACAGAATGGG CCTCGATGAT AAGGATATTG TAGCGCTTTC TGGTGCCCAC ACTCTCGGGA GAGCCTACCC TAGCCGCAGT GGTCTTGGCG TAGCGGAAAC GAAATACACG  AAAGATGGGC CGGGCACCAA GGGTGGGCAA TCTTGGACAG CTGAGTGGCT CAAGTTCGAC AACAGCTACT TCAAGGATGT GAAGGAAAAG AAGGATGCAG ATCTGCTTGT CCTCCCTACA  GATGCTGCCT TATTCGAGGA CCCTGGCTTC AAGGTTTATG CCGAGAAGTA TGCTGAGGAC CAAGGTGCTT TCTTCAGCGA CTATGCGGTG TCACACAAGA AACTCAGTGA GCTCGGCTCC 
AAGTTCGAGC CTGCAGAGGG AATCTCCATT TGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AATTCCCGGG ATGCGGGAAC TCCCTACAGA GGGGTCTTAT nGCGCACATG CCATAGCGGA TTTGTGGTAC TTCTAGTTAC ATTTGGAAAA GAGCCTGCGA AGATCCTTGT CTGCAAGAAT  GGCCGCGGTC ACACCAACTG TCGAGCAGTT GAAGGGAGCC AAGCAAGCCA TTTCCGATAT CATCAAGAGC ACGAGTAGCA ATCCCATCCT GATTCGCCTG GGGTGGCATG ATGCAGGCAC  ATACGACAAG GATGTAAGCG AGTGGCCCAA ATGTGGTGGA GCTAATGGCA GCCTTTTCTA CGACATTGTG CAAAAGCATG GAGCAAATGC AGGTTTGAAC AGTGCCGTGA AGCTGTTGGA  GCCTGTGAAG GCTGCTTATC CGTCTGTCAG CTGGGCTGAC CTGTTCCAGA TGGCAGGTGC AACTGCAGTT GAGCTTGCTG GAGGGCCACA AATCGATATG AAGTACGGCC GAGTTGATGT  ATCGAGTGCT GAGGACGCTG TGAAGGAAGG CAACCTTCCA GCTGCCACCC CTCCATCACC ACCCGATCAT CTCAGGGCTG TTTTCTACAG AATGGGCCTC GATGATAAGG ATATTGTAGC  GCTTTCTGGT GCCCACACTC TCGGGAGAGC CTACCCTAGC CGCAGTGGTC TTGGCGTAGC GGAAACGAAA TACACGAAAG ATGGGCCGGG CACCAAGGGT GGGCAATCTT GGACAGCTGA  GTGGCTCAAG TTCGACAACA GCTACTTCAA GGATGTGAAG GAAAAGAAGG ATGCAGATCT GCTTGTCCTC CCTACAGATG CTGCCTTATT CGAGGACCCT GGCTTCAAGG TTTATGCCGA  GAAGTATGCT GAGGACCAAG GTGCTTTCTT CAGCGACTAT GCGGTGTCAC ACAAGAAACT CAGTGAGCTC GGCTCCAAGT TCGAGCCTGC AGAGGGAATC TCCATTTGAT GGGCCCGTCT  TGGGGTGCTG GGGCGCAAAT TTTTGTTTGC TGGCTGATTG ACTTCCCTTC CATGTGAGGG AACAGATTTT TCGGAGCTTG GGAGTAGCTT ATGACAGCAG TAGTGCCAGG GTTGGTGACA  CGCAGAGAAT CTATGCTCTC AATACATGCT CCTGCTTGGC AGGAAAGGAT TTTCTTCAAC AACTTGCGAA AAGCTGAAGG GTTGACTGAC TTGTCGAGAA GCTGCCTTTT TGTGCAGACG  CTGACGAAGT CACTGCGAAT TGTGTTTGGC CTGGGATTCC TTGTGTCAAC ATTTTGCCTG TGTAAATCTC CTCCTCTGTA ACTGTGCGAT TTGGTTGATG CATGTCGAAT TTCAGGGACA  AAATGGTCAT AATGAACTCT GGCCCTAGGG TAAACACAAC TGATATCTGG AAGTTCATAT GCAGCTGTTA TTCACTCATG TAGATTGTGA GCAGAAGGCA TGCTCATGAT CTAAATCTAC  ATGGTGCCAA GAAGTGGACC ACACCCACCA TCTGAAACAG AGTTGTGTGA AGTGCAAGTG TGTCCTTGCT TTATCATATG TCTGTCATAA GCTACTCATA TGAGTAGCTT ATCTCAAGGG  CTTTCAAGTT TTCAAATGAA CCTATGGCCT ATAACTCCAA CAGTTGCACC CATTGGTAAA ATAAACCATA CACTTCCTGA ACTTCATGGA AACTCGCTTC CACGATACTT CCCCGGAAGT 
ATGTCATCCA CTTCACATCG TACAGTCTTG AACACATTGT CCCAAATACC CA 

Retrieve as FASTA