Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
340 (314) |
| PWM (Da): |
37237.08 (34546.6) |
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| PI (pH): |
9.36 (9.33) |
Peptide Signal: |
cut: 27 range:27-340 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASIKLLAVC LGFLLALMTN TKLCAASSDD CSPGLSTKFY TRSCPRFQQI VKAVVKNDSL YEAQMPAHLL RLLWHDCTVE GCDASVMLKS VGGVPSEREA EANGLFGLMK GGYGTINTIK
ARLERECRGV VSCADIIAAA AKEALKVAGG PDVAMRYGRR DGLVSLKEAP EIVLPHERHS PARVRQVFQR LGFNAADQVA LIGTHTVGTA NCWKFYDRLK GTFDRRLNPT YARYLNNTCI
PPSPGSAGNW AWLHLDNVTA TKFDNQYFKN LLNGYGLLNT DAGLLQTKET KSYVEKFAKS QSAFFSQYKK SLRKLSESGV QLAPKGDIRQ HCERVLADAR
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Retrieve as FASTA
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| Remarks |
Complete sequence from EST (corb-UMD_Coleochaete_c3680_c_s). Containing motif whdc. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAGCA TAAAGTTGCT CGCAGTATGC CTGGGGTTTC TCCTTGCTTT GATGACAAAT ACCAAGCTTT GTGCTGCATC CAGTGACGAC TGCTCGCCGG GCCTCTCCAC TAAGTTTTAT
ACTCGGAGCT GCCCTCGCTT TCAGCAAATT GTGAAGGCGG TGGTGAAAAA TGACTCGCTG TATGAAGCGC AAATGCCCGC CCACCTGCTG CGCCTGCTTT GGCACGACTG TACAGTGGAG
GGTTGTGATG CGTCTGTGAT GCTCAAGTCC GTAGGGGGCG TGCCGTCAGA GCGCGAGGCA GAGGCTAACG GGCTATTTGG CCTGATGAAA GGTGGGTATG GCACCATCAA CACCATCAAA
GCACGTCTGG AACGTGAGTG TCGAGGAGTG GTCAGCTGTG CGGACATCAT TGCTGCTGCT GCCAAAGAGG CTCTGAAAGT GGCAGGTGGA CCGGATGTTG CCATGCGTTA TGGACGCCGG
GACGGCCTGG TATCTCTGAA GGAGGCCCCC GAAATAGTAC TGCCACACGA GAGGCACAGC CCTGCACGCG TGCGCCAAGT GTTCCAGCGG CTCGGTTTCA ACGCTGCAGA CCAGGTGGCC
CTTATTGGCA CACACACGGT GGGGACTGCA AACTGCTGGA AATTTTACGA CCGTCTTAAA GGCACCTTCG ACCGGCGCCT CAACCCAACC TACGCACGTT ATCTCAACAA CACTTGTATC
CCCCCTTCAC CTGGAAGTGC GGGCAATTGG GCATGGCTGC ACTTGGACAA CGTCACTGCC ACCAAGTTTG ACAACCAGTA TTTCAAGAAC CTCCTGAATG GCTACGGGCT TCTCAACACC
GATGCGGGGC TGCTGCAGAC TAAAGAAACC AAGAGTTATG TGGAGAAATT TGCAAAGAGC CAGAGCGCGT TTTTCTCGCA GTACAAGAAG TCGCTGCGCA AACTGTCAGA ATCTGGTGTG
CAGCTGGCAC CCAAAGGCGA CATCAGGCAG CACTGCGAGC GTGTATTGGC TGACGCGCGT TGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAAAAATCTT GCTTGTACTC TATTTGTACC GCTGCTGATG CTGCATTCTG CAGCTTCAGC GGCGGTACAA GTAGAGTACG AACCCTAGCG CATTTTGCAG CTATTGTATT CCCAATGAAG
TACTTCGCTA TATTGGCGAG TGAGAGGAGT AAGCTGGTGC CACGGTAACA AAGAGTATAA GACATAGAAG CAACTATGGT GCAAACAAGA CATCATTGCA AAGTGGTTTT TCTCTCAAGA
CATCACGCGC TGCTGCTTGC CTGCGTGCAC ACATGGCCAG CATAAAGTTG CTCGCAGTAT GCCTGGGGTT TCTCCTTGCT TTGATGACAA ATACCAAGCT TTGTGCTGCA TCCAGTGACG
ACTGCTCGCC GGGCCTCTCC ACTAAGTTTT ATACTCGGAG CTGCCCTCGC TTTCAGCAAA TTGTGAAGGC GGTGGTGAAA AATGACTCGC TGTATGAAGC GCAAATGCCC GCCCACCTGC
TGCGCCTGCT TTGGCACGAC TGTACAGTGG AGGGTTGTGA TGCGTCTGTG ATGCTCAAGT CCGTAGGGGG CGTGCCGTCA GAGCGCGAGG CAGAGGCTAA CGGGCTATTT GGCCTGATGA
AAGGTGGGTA TGGCACCATC AACACCATCA AAGCACGTCT GGAACGTGAG TGTCGAGGAG TGGTCAGCTG TGCGGACATC ATTGCTGCTG CTGCCAAAGA GGCTCTGAAA GTGGCAGGTG
GACCGGATGT TGCCATGCGT TATGGACGCC GGGACGGCCT GGTATCTCTG AAGGAGGCCC CCGAAATAGT ACTGCCACAC GAGAGGCACA GCCCTGCACG CGTGCGCCAA GTGTTCCAGC
GGCTCGGTTT CAACGCTGCA GACCAGGTGG CCCTTATTGG CACACACACG GTGGGGACTG CAAACTGCTG GAAATTTTAC GACCGTCTTA AAGGCACCTT CGACCGGCGC CTCAACCCAA
CCTACGCACG TTATCTCAAC AACACTTGTA TCCCCCCTTC ACCTGGAAGT GCGGGCAATT GGGCATGGCT GCACTTGGAC AACGTCACTG CCACCAAGTT TGACAACCAG TATTTCAAGA
ACCTCCTGAA TGGCTACGGG CTTCTCAACA CCGATGCGGG GCTGCTGCAG ACTAAAGAAA CCAAGAGTTA TGTGGAGAAA TTTGCAAAGA GCCAGAGCGC GTTTTTCTCG CAGTACAAGA
AGTCGCTGCG CAAACTGTCA GAATCTGGTG TGCAGCTGGC ACCCAAAGGC GACATCAGGC AGCACTGCGA GCGTGTATTG GCTGACGCGC GTTGATGATC TGTTGCATAA TGGACGGAGC
AATGTGCTCC TTACCTGGTG GATGAGCCAG GTCATAGTCA AGACAAATCA GTCGCTGCTG TAGCCTTGAA TAGCCCCATG ACAGCGAAGC TGGTGTTCAA TCGGAAGTTG AGAAGGTCTT
CGCAAATAAA ATATTTGTAG TCCAGTTTCT CTCTACTGAA TCACTAGCGG AGAAACTATG TAGTCTGAAA CAGAAGCATG AAGGAATGTG TTGGGTAGTC TCTCTCAATG TGTTAAGGAA
ACAATCTTTG TTGAGGACAA ATGAGTGGAT CCAATCCATC GCTTCAAGCC ATCAACTTGT TTGCATGTTG TATAATTTTC TTGAGGACAA ATCACTGGAT CCAATCCATC GTTTCAAGCC
ATCAACTTGT TTGCATGTTG CATCTGTTCC AGCTATCTTC CAACATCTGC TCTGGCATCC CATCTTGCAT TGGATTGACT GTAGATTGTA TTCATTGCTA CCGACATTGG CTCTGGTGCT
ATTGCTGTTT GGCTGCTGTT AAGAACCGGG GCAAGTATGG TACATATATC CACCTCTATC TAGTTCGATA CATTACCTAC AACGTTCATA GTCAACGCGT GCCTAGTGCT GTCCAGAAGG
AATCAAGGAC CGGGACCACA GACTGGGTAG ATGGAGTGCA TTGTATGTCA GGCAGTGCAC ACCTTGTTCT TGTATATGAA CCACTACATT GTTCCACAAT TAATGTACGG TTACAAGAAT
GGGATAAGAA CACCTTCCAT CATGGCCAAA CCTACACAAA ACAATAGC
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Retrieve as FASTA
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