Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
312 |
| PWM (Da): |
34621.69 |
|
| PI (pH): |
8.48 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
KRPExGELDR SLYxPEDEKC LLEAIKxSSF AVFRKDQRMA ATLLRLAFHD CLTPGGGCDA SILTTNELFH PLNDDLVRTQ TVIVWIREHA AKQCGVIPTM ADTIQRAGAA ACVFSGTEDP
VKFGLGLGRW DRGSKLNAGT IQPGLPSPFE QFHVAVNKLR RFNLTYEEVT VFTLGGHSVG RAGCPNFTDR LNNRTCTRPV DPTLSPKRAC HLVDICTTHP EAHEEFDFVT PFKLDNWYFK
ILLRSKGLLH IDQQFALVPK TAKYVKEYAS MANEKFQNHF LKIYVKVGLV NVNSPTSAPP MQYYYHKDAK IV
|
Retrieve as FASTA
|
|
| Remarks |
Partial sequence from EST (HO502432.1). Short PS and 5'end is missing. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGCGAATGGC CGCCACTCTC CTTAGGCTAG CATTTCACGA CTGCCTTACA CCAGGTGGTG GGTGTGACGC ATCGATCCTG ACAACCAATG AGTTGAATCA CCCCCTCAAT GATGATCTGG
TACCTACAAA GACGGTGATC GTGTCGATCC GCGAGCATGC AGCTAAGCAG TGTGGCGTGA TTCCTACCAT GGCCGACACA ATCCAAAGAG CAGGAGCTGC TGCGTGCGTT TTCTCCGGCA
CGGAAGATCC TGTCAAATTT GGATTTGGTG TAGGCCGCTG GGATCGGGTT CAAAACTCAC TCGGGGACGA TCCAACCGGA TTACCTAGCC CTTCTGAACA AATTCACGTG GTGGTCAATA
AGTTGAGGAG GTTCAATCTG ACCTACGAAG AAGTGACAGT GTTTACTCTT GGTGGCCATA GTGTGGGTCG AGCTGGATGC CCCAACTTCA CCGATAGGCT GAACAATAGG ACATGCACGC
GGCCCGTTGA CCCGACACTC TCGCCCAAAC GAGCTTGCCA TCTGGTGGAC ATATGTACTA CACATCCCGA AGCACGCGAA GAATTTGACC TCGTGACGCC GTTCAAGTTG GATAATTGGT
ACTTCAAGAT TCTTTTGCGG AGAAAAGGGT TGCTGCATAT CGACCAGCAG TTTGCCCTTG TGCCCAAGAC AGCGAAATAT GTGAAAGAGT ACGCATCCAT GCCAAACGAG AAATTTCAAA
ACAAGTTCCT CAATATTTAC ATGAAGGTGG GGCTTGTAAA CGTCAATAGC CCGACAAGCG CTCCGCCCAT GCAGTACTAC TACCATAAGG ATGCGAAAAT CGTTTAATTA AATCAAGTCC
AGGGGCAGTT GCTTGGTTCC TGTGGTCGTG CCCCTTAATG GAAAATAATT GGCTGCTTGG ATCCACCCTT TCTACATATT ACAAAATGGT CCTCGATTCC GGTGGGGAAT AATGTCTTCT
CAGGATCATT GTGAGGGTCA CTTAGGGAAA CTGAAGGTCA CCATAATTTT CTCAGCTCAG AACCTCCTGG GTTTCATTTC CCTGGGGTAT GAGATAGAGC TGGAACCAGG GCTAGGGTCG
CCGACTAACC GGCGGGCTTT GCTGGTGGAT TGTCCGTCCC GGTTACCCGG TGGCTTGAAG AGAGATGACA GGCGCCTGTC ATCTTTCTAA AAAAGAAATT CCGTAGGTGC TGGGGTTTAC
CCGGTCGCTC GGGTCCAGGG TTCGCCCGCC TCACTCGTGG AGAATATGCG CGAACGGGCA ACTTTAGAAC CATTTCTCCC AGTCTGGTTA TTCTTGGGCT CCAGAATTTT GTTGCAGACG
ATGAGAGCAG CAATGACAGC CGTTGAATGA TTTTTGTTGG TTCCTCAGAG AAATCACTGT TGAGCAAAGT TCTGGTCGGG ATTGTGGATG TATGTTCTGT TAATGCTCGC CAGATTTATA
GTGCGACCAC AATTAATCCA TTTTCAACCG TTTCCAAACG GTCACATTTT TAGTTTTGTT TTGATACGTG GCAATATGCC ACGGTCGGAC TGCAAAnAnn nnATGGTCTG GTCTGGTCTG
nTCTGGTCTG TTTTCTGGTn TGGTCTGGTC AGATCTGACA TATCTGCTGG GATCTTAGAC GACAAGAACC AGCTTGAACT GTTCTTTTAT CTGATCTTTT CTGGATCTGC TCTTGTGTTA
TTTGGTCTGG TCT
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGCGTCCTG AGAnGGGTGA GCTnGACCGA TCACTGTATn ATCCCGAGGA TGAAAAGTGC CTTCTAGAAG CCATCAAGnA GAGTTCGTTT GCTGTGTTTC GAAAGGACCA GCGAATGGCC
GCAACTCTCC TTAGGCTAGC ATTTCACGAC TGCCTTACAC CGGGTGGTGG GTGTGACGCA TCGATCCTGA CAACCAATGA GCTGTTTCAC CCGCTCAATG ATGATCTGGT ACGGACACAG
ACGGTGATCG TGTGGATCCG GGAGCATGCA GCTAAGCAGT GTGGCGTGAT TCCTACCATG GCCGACACAA TCCAAAGAGC AGGAGCTGCC GCGTGCGTTT TCTCCGGCAC GGAAGATCCG
GTCAAGTTTG GACTTGGACT GGGCCGCTGG GATCGGGGTT CTAAACTCAA CGCGGGGACG ATCCAACCGG GATTACCTAG CCCTTTTGAA CAATTCCACG TGGCGGTCAA TAAGTTGAGG
AGGTTCAATC TGACCTACGA AGAGGTGACA GTGTTTACTC TTGGTGGCCA TAGTGTGGGT CGAGCTGGAT GCCCCAACTT CACCGATAGG CTGAACAATA GGACATGCAC GCGGCCCGTA
GACCCGACAC TCTCGCCCAA ACGAGCTTGC CATCTGGTGG ACATATGTAC TACGCATCCG GAAGCACACG AAGAATTTGA CTTCGTGACG CCGTTCAAGT TGGATAATTG GTACTTCAAG
ATTCTTTTGC GGAGTAAGGG GTTGCTGCAT ATCGACCAGC AGTTTGCCCT TGTGCCCAAG ACAGCGAAAT ATGTGAAAGA GTACGCATCC ATGGCAAACG AGAAATTTCA AAACCACTTC
CTCAAGATTT ACGTGAAGGT GGGGCTTGTA AACGTCAATA GCCCGACAAG CGCTCCGCCC ATGCAGTACT ACTATCATAA GGATGCGAAA ATCGTTTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGGGACAATC GGCCGCTCGC GACAGACCCC GGCTATGGTA GGCTGGTAGC TATATCAAGG AAGAACACTG CTTCCAACTT TCCTCCCACT TTTCGCTTCA AATTCTATCT ATAGATGATC
GTGGTCAGTG TCCACGTGGT GTGCATCCCT TGCCTCAAAG TTTGATCGTG CGACGTGTGC ACAAGGAAGT CGATCATTTG CGATCATATC GAATTGAGAG AACACGCGGC GATGGCTTCC
TTGTCATTGA TTACCTGGTT GAGAGGTTGC ATACTACTTT TCCTTGCTCT TGTTCTAAGC TTGTCGAATA ACAAGTCATG CGTCGAGGGC TCACCGTCGG ATGGACTTAC TGCAAAGCCC
GTTATCAAGC GTCGCCATCC CCCCTTATGG nAAGCGTCCT GAGAnGGGTG AGCTnGACCG ATCACTGTAT nATCCCGAGG ATGAAAAGTG CCTTCTAGAA GCCATCAAGn AGAGTTCGTT
TGCTGTGTTT CGAAAGGACC AGCGAATGGC CGCAACTCTC CTTAGGCTAG CATTTCACGA CTGCCTTACA CCGGGTGGTG GGTGTGACGC ATCGATCCTG ACAACCAATG AGCTGTTTCA
CCCGCTCAAT GATGATCTGG TACGGACACA GACGGTGATC GTGTGGATCC GGGAGCATGC AGCTAAGCAG TGTGGCGTGA TTCCTACCAT GGCCGACACA ATCCAAAGAG CAGGAGCTGC
CGCGTGCGTT TTCTCCGGCA CGGAAGATCC GGTCAAGTTT GGACTTGGAC TGGGCCGCTG GGATCGGGGT TCTAAACTCA ACGCGGGGAC GATCCAACCG GGATTACCTA GCCCTTTTGA
ACAATTCCAC GTGGCGGTCA ATAAGTTGAG GAGGTTCAAT CTGACCTACG AAGAGGTGAC AGTGTTTACT CTTGGTGGCC ATAGTGTGGG TCGAGCTGGA TGCCCCAACT TCACCGATAG
GCTGAACAAT AGGACATGCA CGCGGCCCGT AGACCCGACA CTCTCGCCCA AACGAGCTTG CCATCTGGTG GACATATGTA CTACGCATCC GGAAGCACAC GAAGAATTTG ACTTCGTGAC
GCCGTTCAAG TTGGATAATT GGTACTTCAA GATTCTTTTG CGGAGTAAGG GGTTGCTGCA TATCGACCAG CAGTTTGCCC TTGTGCCCAA GACAGCGAAA TATGTGAAAG AGTACGCATC
CATGGCAAAC GAGAAATTTC AAAACCACTT CCTCAAGATT TACGTGAAGG TGGGGCTTGT AAACGTCAAT AGCCCGACAA GCGCTCCGCC CATGCAGTAC TACTATCATA AGGATGCGAA
AATCGTTTAA TTAAATCAAG TCCAGGGGCA GTTGCTTGGT TCCTGTGGTC GTGCCCCTTA ATGGAAAATA ATTGGCTGCT TGGATCCACC CTTTCTACAT ATTACAAAAT GGTCCTCGAT
TCCGGTGGGG AATAATGTCT TCTCAGGATC ATTGTGAGGG TCACTTAGGG AAACTGAAGG TCACCATAAT TTTCTCAGCT CAGAACCTCC TGGGTTTCAT TTCCCTGGGG TATGAGATAG
AGCTGGAACC AGGGCTAGGG TCGCCGACTA ACCGGCGGGC TTTGCTGGTG GATTGTCCGT CCCGGTTACC CGGTGGCTTG AAGAGAGATG ACAGGCGCCT GTCATCTTTC TAAAAAAGAA
ATTCCGTAGG TGCTGGGGTT TACCCGGTCG CTCGGGTCCA GGGTTCGCCC GCCTCACTCG TGGAGAATAT GCGCGAACGG GCAACTTTAG AACCATTTCT CCCAGTCTGG TTATTCTTGG
GCTCCAGAAT TTTGTTGCAG ACGATGAGAG CAGCAATGAC AGCCGTTGAA TGATTTTTGT TGGTTCCTCA GAGAAATCAC TGTTGAGCAA AGTTCTGGTC GGGATTGTGG ATGTATGTTC
TGTTAATGCT CGCCAGATTT ATAGTGCGAC CACAATTAAT CCATTTTCAA CCGTTTCCAA ACGGTCACAT TTTTAGTTTT GTTTTGATAC GTGGCAATAT GCCACGGTCG GACTGCAAAn
AnnnnATGGT CTGGTCTGGT CTGnTCTGGT CTGTTTTCTG GTnTGGTCTG GTCAGATCTG ACATATCTGC TGGGATCTTA GACGACAAGA ACCAGCTTGA ACTGTTCTTT TATCTGATCT
TTTCTGGATC TGCTCTTGTG TTATTTGGTC TGGTCT
|
Retrieve as FASTA
|
|
