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Entry information : NhyPrx04
Entry ID 7745
Creation 2010-11-04 (Qiang Li)
Last sequence changes 2010-12-21 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: NhyPrx04
Name NhyPrx04
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Nitella
Organism Nitella hyalina    [TaxId: 181804 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NhyPrx04
start..stop		 S start..stop
NhyPrx02 177 1.5e-56 1..172 60..236
CbraPrx04 178 7.91e-56 1..172 199..366
CbraPrx06 169 2.04e-52 1..172 200..366
NhyPrx07 162 2.61e-50 1..172 102..267
Literature and cross-references NhyPrx04
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO541872.1  HO536356.1 [3' end]
Protein sequence: NhyPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172
PWM (Da):   %s   19298.82 Transmb domain:   %s   i7-29o
PI (pH):   %s   9.77
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DDASMLPDVK QAFNVSLQKL TSFNLTLEEV TLFSIGGHTV GKAGCDNFLF RLNNSVDSKG RSQCGHPIDT TLQPKFACLT RECRNGTVDV DVNFDKTPFK MDQFYFKMLF KRKGLLNTDQ 
SFALDSRTAA FVRKYASGSQ RALRKDFLKV FSKVELVNIN GPTSRPPEKY YY 

Retrieve as FASTA  
Remarks Partial sequence from ESTs (HO536356.1 and HO541872.1). 5' end is missing.
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGATGCAA GCATGCTTCC AGATGTCAAG CAGGCATTCA ACGTCTCTCT CCAGAAACTG ACGTCATTTA ACCTGACCTT GGAGGAGGTG ACGTTATTTT CCATCGGCGG CCATACTGTC  GGCAAAGCTG GATGCGACAA TTTTCTATTC AGACTCAACA ATAGCGTCGA TAGCAAGGGA CGTTCGCAGT GCGGGCATCC GATCGACACG ACACTTCAGC CGAAGTTCGC CTGTTTAACG  AGGGAATGTC GTAATGGGAC CGTCGATGTG GATGTCAATT TCGACAAAAC ACCGTTCAAG ATGGATCAGT TTTACTTCAA GATGCTCTTC AAGCGAAAAG GATTACTTAA CACAGACCAA  TCGTTTGCAC TCGACTCCAG GACGGCGGCA TTTGTCCGTA AGTACGCATC GGGTTCTCAA AGAGCTTTGA GAAAAGACTT CCTGAAAGTG TTCTCAAAAG TGGAGCTTGT GAACATCAAT 
GGACCAACCA GTCGACCGCC TGAAAAATAT TACTACTAG 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTGATGATGC AAGCATGCTT CCAGATGTCA AGCAGGCATT CAACGTCTCT CTCCAGAAAC TGACGTCATT TAACCTGACC TTGGAGGAGG TGACGTTATT TTCCATCGGC GGCCATACTG  TCGGCAAAGC TGGATGCGAC AATTTTCTAT TCAGACTCAA CAATAGCGTC GATAGCAAGG GACGTTCGCA GTGCGGGCAT CCGATCGACA CGACACTTCA GCCGAAGTTC GCCTGTTTAA  CGAGGGAATG TCGTAATGGG ACCGTCGATG TGGATGTCAA TTTCGACAAA ACACCGTTCA AGATGGATCA GTTTTACTTC AAGATGCTCT TCAAGCGAAA AGGATTACTT AACACAGACC  AATCGTTTGC ACTCGACTCC AGGACGGCGG CATTTGTCCG TAAGTACGCA TCGGGTTCTC AAAGAGCTTT GAGAAAAGAC TTCCTGAAAG TGTTCTCAAA AGTGGAGCTT GTGAACATCA  ATGGACCAAC CAGTCGACCG CCTGAAAAAT ATTACTACTA GTCTGAGACT CTGAGTACCC CCAATAACAA CCCCTATCAT CCCTACTATG TATTACTAGT ATTATACCTG TCTGACTCAA  CACTGGCAGT TCGATCATGG ATTTAAGACT GGCTGTGACT GACCATTCAG TTTTTCTCAT AATGTAAATT ATTAGTATGT CTAGCGATTC GCGCCGTTTC GGTGGATCAG AAGTTCTGAA  CTTCCACGTC AGCGCGTACT CGCGTTTGAT TTGAGCTTCA TTGTCGTCAT CTGAAACGAT ATGTAATTCC GGGGGGAGGG GTTTGGTGTT GTCGTGTCAC GTCAGTGTGA CGTCAGTGTG  ACGTTGGGGG AACGTCGGCG TGATTGTGCG GCCCCTTCCT TTTCGCTACT TTACACTGTT CCTTGCTTTC ATAGGAATCG CTGTGTAGTG TTGGACCGTA TTACATTTGA TTGAAAGTAA  CGATTCCTTT GAGTTGTATG TACTTCTCCA TAATTGGATG TGATTCCTTG TAGACCCTTA GCTCATCTCA TCTCATCTCA TCTCTGATGC TTATTCTTGA ACTGTGACGA ACTTGTATAT  AGCTATTTAA AGTTGTAGAA AGTTAGAAAC TAAGGCAACT ACTTTCGGAA AAATTGGCTG TCAATCCTCC CAGGGGAGCA ATCAATGCAG CCAGGAGATA ATGCATACAG GTATGTTGTC 
TGTATATTAT ACGACTCTGT AACCTGCAGG GA 

Retrieve as FASTA