Entry information : BdiPrx27 (Bradi1g39190)
Entry ID 7809
Creation 2011-01-06 (Toky Ramarohetra)
Last sequence changes 2011-01-06 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx27 (Bradi1g39190)
Name (synonym) BdiPrx27 (Bradi1g39190)
Class Class III peroxidase    [Orthogroup: Prx092]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx27
start..stop
S start..stop
TaPrx236-1B 501 0 2..326 3..319
TaPrx28-1B 488 1.36e-175 23..325 25..322
TaPrx236-1D 485 1.21e-174 1..326 1..319
TaPrx229-1B 485 1.65e-174 23..326 26..324
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7809' 'join(35745187..35745402,35745535..35746299)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 35745187..35745402 214 N° 2 35745535..35746299 763  
join(35745187..35745402,35745535..35746299)


exon

Literature and cross-references BdiPrx27 (Bradi1g39190)
DNA ref. Phytozome 12:   Bd1 (35745187..35746299)
Protein sequence: BdiPrx27 (Bradi1g39190)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   35073.84 (32696.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.92 (4.92) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSSSSWFALLLFVGLACTAANSNVLSAGYYEKTCPNVQGVVRSVMAHRVAGEPRMAPAVLRLFFHDCFVNGCDGSVLLDATPFSASEKDAEPNDSLTGFTVIDEIKSILEHDCPATVS
CADVLALASRDAVALLGGPTWAVPLGRKDSRAAADPESTKNALPSPKDNLEELITMFAKHGLDASDMTALSGAHTVGMAKCESYRDRVYGIDNEHYIDPSFADARRQTCPLQEGPSDGKA
PFDSQTPMRFDNAYYRDLTAHRGLLSSDQALYGGHGGMQDHLVEMYSTDGEAFARDFANAMVKMGNIPPPMGMPVEVRLHCSKVNY*

Retrieve as FASTA  
Remarks Complete sequence (Chromo 1, Intron 1), no EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCCTCTTCTTCTTCTTGGTTTGCACTGCTCCTCTTCGTTGGTCTCGCCTGCACGGCGGCCAATTCCAACGTGCTCTCCGCGGGGTACTACGAAAAGACATGCCCAAACGTACAG
GGCGTCGTGAGGTCCGTGATGGCGCACAGGGTGGCCGGCGAGCCGAGGATGGCACCCGCAGTCCTCCGCCTCTTCTTCCATGACTGCTTCGTCAAC
ACGTAAGCATTTCAACATACTCAT
GCATGTCATGTTCTTCACTACCAAGTTACTCTCTCTGCGATCCTAAATTCTTGTCGTGTTTTTAGTTTTTATATATTGCTAAACGACCGTTCACAAATGATATATGACAGGGATGTGACG
GCTCTGTTCTCCTGGATGCCACGCCATTCTCCGCCAGCGAGAAGGACGCGGAGCCGAACGACTCGCTCACGGGCTTCACGGTAATCGACGAAATCAAGTCCATTCTCGAGCACGACTGTC
CGGCCACGGTCTCCTGCGCCGACGTGCTGGCCCTGGCGTCCCGCGACGCCGTGGCCCTTCTCGGAGGCCCCACCTGGGCCGTGCCGCTGGGCCGCAAGGACTCACGGGCCGCCGCTGACC
CAGAGTCCACCAAGAACGCGCTCCCGAGCCCAAAAGATAACCTGGAAGAACTCATCACCATGTTCGCAAAGCACGGCCTCGACGCCAGCGACATGACGGCGCTCTCGGGTGCGCACACCG
TCGGCATGGCCAAATGCGAGAGCTACAGGGACCGTGTCTACGGGATTGACAACGAGCACTACATCGATCCTTCCTTCGCGGACGCCAGGCGGCAAACGTGCCCGTTGCAAGAAGGCCCCT
CCGACGGGAAAGCGCCGTTTGACTCGCAGACGCCCATGAGGTTCGACAACGCCTACTACCGGGACCTTACCGCGCACCGCGGCCTTCTGTCCTCCGACCAGGCTCTCTACGGGGGGCACG
GTGGGATGCAGGACCATCTGGTGGAGATGTACAGCACCGATGGTGAGGCCTTCGCCAGGGACTTCGCCAACGCCATGGTCAAGATGGGGAACATACCACCACCCATGGGGATGCCCGTCG
AGGTCAGGCTCCACTGCTCCAAGGTCAACTATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCCTCTTCTTCTTCTTGGTTTGCACTGCTCCTCTTCGTTGGTCTCGCCTGCACGGCGGCCAATTCCAACGTGCTCTCCGCGGGGTACTACGAAAAGACATGCCCAAACGTACAG
GGCGTCGTGAGGTCCGTGATGGCGCACAGGGTGGCCGGCGAGCCGAGGATGGCACCCGCAGTCCTCCGCCTCTTCTTCCATGACTGCTTCGTCAAC
GGATGTGACGGCTCTGTTCTCCTG
GATGCCACGCCATTCTCCGCCAGCGAGAAGGACGCGGAGCCGAACGACTCGCTCACGGGCTTCACGGTAATCGACGAAATCAAGTCCATTCTCGAGCACGACTGTCCGGCCACGGTCTCC
TGCGCCGACGTGCTGGCCCTGGCGTCCCGCGACGCCGTGGCCCTTCTCGGAGGCCCCACCTGGGCCGTGCCGCTGGGCCGCAAGGACTCACGGGCCGCCGCTGACCCAGAGTCCACCAAG
AACGCGCTCCCGAGCCCAAAAGATAACCTGGAAGAACTCATCACCATGTTCGCAAAGCACGGCCTCGACGCCAGCGACATGACGGCGCTCTCGGGTGCGCACACCGTCGGCATGGCCAAA
TGCGAGAGCTACAGGGACCGTGTCTACGGGATTGACAACGAGCACTACATCGATCCTTCCTTCGCGGACGCCAGGCGGCAAACGTGCCCGTTGCAAGAAGGCCCCTCCGACGGGAAAGCG
CCGTTTGACTCGCAGACGCCCATGAGGTTCGACAACGCCTACTACCGGGACCTTACCGCGCACCGCGGCCTTCTGTCCTCCGACCAGGCTCTCTACGGGGGGCACGGTGGGATGCAGGAC
CATCTGGTGGAGATGTACAGCACCGATGGTGAGGCCTTCGCCAGGGACTTCGCCAACGCCATGGTCAAGATGGGGAACATACCACCACCCATGGGGATGCCCGTCGAGGTCAGGCTCCAC
TGCTCCAAGGTCAACTATTGA

Retrieve as FASTA