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Entry information : BdiPrx38 (Bradi1g59550)
Entry ID 7814
Creation 2011-01-06 (Toky Ramarohetra)
Last sequence changes 2011-01-06 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx38 (Bradi1g59550)
Name (synonym) BdiPrx38 (Bradi1g59550)
Class Class III peroxidase    [Orthogroup: Prx017]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx38
start..stop		 S start..stop
TaPrx47-1B 511 0 28..338 29..336
TaPrx47-1D 506 0 28..338 29..336
SbPrx24 477 1.04e-170 4..338 11..336
OsPrx134 470 3.64e-168 2..338 3..335
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7814' 'complement(join(58564922..58565947))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 58564922..58565947 1024  
complement(join(58564922..58565947))


exon

Literature and cross-references BdiPrx38 (Bradi1g59550)
DNA ref. Phytozome 12:   Bd1 (58565947..58564922)
Protein sequence: BdiPrx38 (Bradi1g59550)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341 (312)
PWM (Da):   %s   36704.54 (33755.9)  
PI (pH):   %s   5.45 (5.45) Peptide Signal:   %s   cut: 30 range:30-341
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTPALLQQS TAAALFLLLL LAPPTLTTAQ LDINFYSKSC PELEKTVRQE MLAILKESPT LAGPFLRLHF HDCFVRGCDA SVLLDSGPNT PIPAATAEKD APPNKSLRGF GAVQRVKDKL  DALCPSTVSC ADVLALMARD AVFLSSGPSY AVPLGRRDGL RSVANDTKQL PPPTSNFTRL AAMFAAKGLS PKDIVVLSGA HTLGTARCVS FSDRLYNYTG ANNLADVDPE LDGEYVTALR 
SRCQSLADNT TLAEMDAGSF ETFDAGYYRL VAKRRGVLHS DAALLEDEET RAYVERQATG MFVAEFFRDF AESMVKMGSI GVLTGDQGEI RNKCYVVNSH H 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron), no EST.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCACGC CGGCACTGCT ACAACAATCC ACGGCCGCCG CCCTGTTCCT GCTCCTTCTC CTCGCGCCGC CGACCTTGAC CACAGCCCAG CTAGACATAA ACTTCTACAG CAAGTCCTGC  CCGGAGCTCG AGAAGACGGT CCGCCAAGAG ATGCTCGCCA TCCTCAAAGA ATCCCCGACG CTCGCCGGCC CGTTCCTCCG TCTCCACTTC CACGACTGCT TCGTGCGCGG CTGCGACGCG  TCCGTCCTCC TCGACTCCGG CCCCAACACC CCGATCCCCG CCGCCACCGC CGAGAAGGAC GCGCCGCCCA ACAAGAGCCT GCGGGGCTTC GGCGCCGTGC AGCGGGTCAA GGACAAGCTC  GACGCGCTCT GCCCATCCAC CGTCTCCTGC GCCGACGTCC TCGCCCTCAT GGCCCGCGAC GCCGTCTTCC TCAGCTCAGG CCCGTCCTAC GCCGTCCCTC TCGGCCGCCG CGACGGGCTC  CGCTCCGTCG CCAACGACAC CAAGCAGCTC CCGCCGCCCA CCTCCAACTT CACCCGCCTC GCCGCCATGT TCGCCGCCAA GGGGCTCTCC CCAAAAGACA TCGTCGTGCT CTCCGGCGCC  CACACGCTCG GCACCGCCCG GTGCGTGTCC TTCTCCGACC GCCTCTACAA CTACACCGGC GCAAATAACC TCGCCGACGT CGACCCGGAG CTCGACGGGG AGTACGTCAC CGCTCTGAGG  TCACGCTGCC AGAGCCTCGC CGACAACACG ACGCTCGCCG AGATGGACGC CGGGAGCTTC GAGACCTTCG ATGCCGGTTA TTACCGGCTT GTCGCTAAGC GGCGTGGCGT GCTGCATTCT  GATGCTGCGT TGCTGGAGGA TGAGGAGACG AGGGCTTATG TGGAGAGGCA GGCTACGGGG ATGTTTGTGG CAGAGTTCTT CAGGGATTTT GCAGAGTCGA TGGTGAAGAT GGGGAGCATT 
GGCGTGCTCA CTGGGGATCA GGGCGAGATC AGGAACAAGT GCTACGTCGT CAACAGCCAC CACTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCACGC CGGCACTGCT ACAACAATCC ACGGCCGCCG CCCTGTTCCT GCTCCTTCTC CTCGCGCCGC CGACCTTGAC CACAGCCCAG CTAGACATAA ACTTCTACAG CAAGTCCTGC  CCGGAGCTCG AGAAGACGGT CCGCCAAGAG ATGCTCGCCA TCCTCAAAGA ATCCCCGACG CTCGCCGGCC CGTTCCTCCG TCTCCACTTC CACGACTGCT TCGTGCGCGG CTGCGACGCG  TCCGTCCTCC TCGACTCCGG CCCCAACACC CCGATCCCCG CCGCCACCGC CGAGAAGGAC GCGCCGCCCA ACAAGAGCCT GCGGGGCTTC GGCGCCGTGC AGCGGGTCAA GGACAAGCTC  GACGCGCTCT GCCCATCCAC CGTCTCCTGC GCCGACGTCC TCGCCCTCAT GGCCCGCGAC GCCGTCTTCC TCAGCTCAGG CCCGTCCTAC GCCGTCCCTC TCGGCCGCCG CGACGGGCTC  CGCTCCGTCG CCAACGACAC CAAGCAGCTC CCGCCGCCCA CCTCCAACTT CACCCGCCTC GCCGCCATGT TCGCCGCCAA GGGGCTCTCC CCAAAAGACA TCGTCGTGCT CTCCGGCGCC  CACACGCTCG GCACCGCCCG GTGCGTGTCC TTCTCCGACC GCCTCTACAA CTACACCGGC GCAAATAACC TCGCCGACGT CGACCCGGAG CTCGACGGGG AGTACGTCAC CGCTCTGAGG  TCACGCTGCC AGAGCCTCGC CGACAACACG ACGCTCGCCG AGATGGACGC CGGGAGCTTC GAGACCTTCG ATGCCGGTTA TTACCGGCTT GTCGCTAAGC GGCGTGGCGT GCTGCATTCT  GATGCTGCGT TGCTGGAGGA TGAGGAGACG AGGGCTTATG TGGAGAGGCA GGCTACGGGG ATGTTTGTGG CAGAGTTCTT CAGGGATTTT GCAGAGTCGA TGGTGAAGAT GGGGAGCATT 
GGCGTGCTCA CTGGGGATCA GGGCGAGATC AGGAACAAGT GCTACGTCGT CAACAGCCAC CACTAA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCACGC CGGCACTGCT ACAACAATCC ACGGCCGCCG CCCTGTTCCT GCTCCTTCTC CTCGCGCCGC CGACCTTGAC CACAGCCCAG CTAGACATAA ACTTCTACAG CAAGTCCTGC  CCGGAGCTCG AGAAGACGGT CCGCCAAGAG ATGCTCGCCA TCCTCAAAGA ATCCCCGACG CTCGCCGGCC CGTTCCTCCG TCTCCACTTC CACGACTGCT TCGTGCGCGG CTGCGACGCG  TCCGTCCTCC TCGACTCCGG CCCCAACACC CCGATCCCCG CCGCCACCGC CGAGAAGGAC GCGCCGCCCA ACAAGAGCCT GCGGGGCTTC GGCGCCGTGC AGCGGGTCAA GGACAAGCTC  GACGCGCTCT GCCCATCCAC CGTCTCCTGC GCCGACGTCC TCGCCCTCAT GGCCCGCGAC GCCGTCTTCC TCAGCTCAGG CCCGTCCTAC GCCGTCCCTC TCGGCCGCCG CGACGGGCTC  CGCTCCGTCG CCAACGACAC CAAGCAGCTC CCGCCGCCCA CCTCCAACTT CACCCGCCTC GCCGCCATGT TCGCCGCCAA GGGGCTCTCC CCAAAAGACA TCGTCGTGCT CTCCGGCGCC  CACACGCTCG GCACCGCCCG GTGCGTGTCC TTCTCCGACC GCCTCTACAA CTACACCGGC GCAAATAACC TCGCCGACGT CGACCCGGAG CTCGACGGGG AGTACGTCAC CGCTCTGAGG  TCACGCTGCC AGAGCCTCGC CGACAACACG ACGCTCGCCG AGATGGACGC CGGGAGCTTC GAGACCTTCG ATGCCGGTTA TTACCGGCTT GTCGCTAAGC GGCGTGGCGT GCTGCATTCT  GATGCTGCGT TGCTGGAGGA TGAGGAGACG AGGGCTTATG TGGAGAGGCA GGCTACGGGG ATGTTTGTGG CAGAGTTCTT CAGGGATTTT GCAGAGTCGA TGGTGAAGAT GGGGAGCATT  GGCGTGCTCA CTGGGGATCA GGGCGAGATC AGGAACAAGT GCTACGTCGT CAACAGCCAC CACTAATCCA TCCATCTCTT ATGCATCGGA ATAACCATGC ATGCTTAATT AACTACACGC  AACTTTTAAT TTGAGATTGC ATCTCTTCGC ACACATATAT ATATATATGT GTGTGTGCGC GCTTGATTAA TTTCAACATA TGGTTACATT TATTCCTTTG TATGTAAGTG TGTATGTATA  TTTGCTGGTC GTGCTTGCTT GTAACACTGA TTGCTTGGTG AATTTCTTGT TTTGATTTTT TTTCCCTTTT TCCTGGGGGT TTGGCTCAGT TCATCATGTA ACAATGACAT GTGGAGTAAC 
GTAATAAGAC ATTTTCCCAT GTTTTTTGCC 

Retrieve as FASTA