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Entry information : BdiPrx24(Bradi1g38297)
Entry ID 7820
Creation 2011-01-07 (Toky Ramarohetra)
Last sequence changes 2011-01-07 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-01-18 (Christophe Dunand)
Peroxidase information: BdiPrx24(Bradi1g38297)
Name BdiPrx24(Bradi1g38297)
Class Class III peroxidase    [Orthogroup: Prx150]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx24
start..stop		 S start..stop
TaPrx14-1B 564 0 1..318 1..321
TaPrx14-1D 558 0 1..318 1..319
TaPrx14-1A 551 0 1..318 1..319
OsPrx87 530 0 1..318 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7820' 'join(34477710..34477922,34478016..34478207,34478298..34478849)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 34477710..34477922 211 N° 2 34478016..34478207 190 N° 3 34478298..34478849 550  
join(34477710..34477922,34478016..34478207,34478298..34478849)


exon

Literature and cross-references BdiPrx24(Bradi1g38297)
DNA ref. Phytozome 12:   Bd1 (34477710..34478849)
Protein sequence: BdiPrx24(Bradi1g38297)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (294)
PWM (Da):   %s   33228.7 (30773.4)  
PI (pH):   %s   8.75 (8.92) Peptide Signal:   %s   cut: 25 range:25-318
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGFLLARCIIGAATLLCVLPPCQAKFTSKFYGKTCPNLGAIVRSV
MAPAVAKEPRMGASIIRLFFHDCFVNGCDGSILLDDTPTFTGEKNAGANVNSVRGYEVIDAIKTQVETACKATVSCADIIALASRDAVNLVGGPTWNVQLGRKDSRTASQSAANANLPGPGSSAASLVSAFAAKGLSAREMTALSG
AHTVGRARCVLFRGRIYSDPNINATFAAARQQTCPQAGGDGNLAPFDDQTPDAFDNAYYKNLMAQRGLLHSDQELFNGGPQDALVRKYSGNAGIFAGDFAKAMVKMGGLMPVAGTPTEVR
LNCRKVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1 and 2), no EST. Incorrect prediction from Phytozome (splicing error intron 2).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCTTCTTGTTAGCTAGGTGCATTATCGGCGCTGCTACTCTCCTATGTGTGCTTCCTCCTTGTCAGGCCAAGTTCACAAGCAAGTTCTACGGCAAGACATGCCCAAATCTGGGAGCC
ATCGTGCGGTCGGTGATGGCGCCGGCCGTCGCCAAAGAGCCGCGGATGGGCGCATCGATCATCCGGCTCTTCTTCCATGACTGCTTCGTGAACACGTGAGTCCATCGGTAGAATTTGCTC
TTGCCTGGCTTGCTAGCTTCCTGAGCTTACATACAGCGCCATCCGTATGTATGTTTGCAATTGCACAGGGATGTGACGGGTCGATCCTCCTGGACGACACGCCGACGTTCACCGGCGAGA
AGAACGCCGGCGCCAACGTCAACTCCGTCCGCGGGTACGAGGTGATCGACGCCATCAAGACACAGGTCGAAACGGCCTGCAAGGCCACGGTGTCCTGCGCCGACATCATCGCATTGGCAT
CTCGCGACGCCGTAAACTTGTGGTGAGTGCACGCTCGTCGGACCCGGTAAGAATGGTAATTAAAAGGACCTAAGCTTGCGACGTCTTACTGACGCGCCAATGTGCATAGCAGGTCGGTGG
CCCGACGTGGAACGTGCAGCTGGGCAGGAAGGACTCGCGGACGGCGAGCCAGAGCGCGGCCAACGCCAACCTCCCGGGCCCAGGCTCCAGCGCCGCGTCGCTCGTCTCGGCGTTCGCGGC
AAAGGGGCTCTCCGCGCGGGAGATGACGGCGCTGTCCGGGGCGCACACTGTGGGGCGCGCGCGCTGCGTCCTCTTCCGCGGCCGCATCTACAGCGATCCCAACATCAACGCCACCTTCGC
GGCGGCGCGGCAGCAGACGTGCCCGCAGGCTGGCGGGGACGGCAACTTGGCGCCGTTCGACGACCAGACGCCTGACGCGTTCGACAACGCCTACTATAAGAACCTGATGGCGCAGCGCGG
GCTGCTGCACTCTGATCAGGAGCTCTTCAACGGCGGGCCGCAGGACGCGCTGGTGAGGAAGTACAGCGGCAATGCCGGCATCTTCGCCGGCGACTTCGCTAAGGCCATGGTCAAGATGGG
TGGGCTCATGCCGGTGGCCGGAACGCCGACGGAGGTCAGGCTGAATTGCAGGAAGGTGAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCTTCTTGTTAGCTAGGTGCATTATCGGCGCTGCTACTCTCCTATGTGTGCTTCCTCCTTGTCAGGCCAAGTTCACAAGCAAGTTCTACGGCAAGACATGCCCAAATCTGGGAGCC
ATCGTGCGGTCGGTGATGGCGCCGGCCGTCGCCAAAGAGCCGCGGATGGGCGCATCGATCATCCGGCTCTTCTTCCATGACTGCTTCGTGAACGGATGTGACGGGTCGATCCTCCTGGAC
GACACGCCGACGTTCACCGGCGAGAAGAACGCCGGCGCCAACGTCAACTCCGTCCGCGGGTACGAGGTGATCGACGCCATCAAGACACAGGTCGAAACGGCCTGCAAGGCCACGGTGTCC
TGCGCCGACATCATCGCATTGGCATCTCGCGACGCCGTAAACTTGGTCGGTGGCCCGACGTGGAACGTGCAGCTGGGCAGGAAGGACTCGCGGACGGCGAGCCAGAGCGCGGCCAACGCC
AACCTCCCGGGCCCAGGCTCCAGCGCCGCGTCGCTCGTCTCGGCGTTCGCGGCAAAGGGGCTCTCCGCGCGGGAGATGACGGCGCTGTCCGGGGCGCACACTGTGGGGCGCGCGCGCTGC
GTCCTCTTCCGCGGCCGCATCTACAGCGATCCCAACATCAACGCCACCTTCGCGGCGGCGCGGCAGCAGACGTGCCCGCAGGCTGGCGGGGACGGCAACTTGGCGCCGTTCGACGACCAG
ACGCCTGACGCGTTCGACAACGCCTACTATAAGAACCTGATGGCGCAGCGCGGGCTGCTGCACTCTGATCAGGAGCTCTTCAACGGCGGGCCGCAGGACGCGCTGGTGAGGAAGTACAGC
GGCAATGCCGGCATCTTCGCCGGCGACTTCGCTAAGGCCATGGTCAAGATGGGTGGGCTCATGCCGGTGGCCGGAACGCCGACGGAGGTCAGGCTGAATTGCAGGAAGGTGAACTAA

Retrieve as FASTA