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Entry information : BdiPrx28(Bradi1g41115)
Entry ID 7822
Creation 2011-01-07 (Toky Ramarohetra)
Last sequence changes 2011-03-03 (Toky Ramarohetra)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-01-20 (Bruno Savelli)
Peroxidase information: BdiPrx28(Bradi1g41115)
Name BdiPrx28(Bradi1g41115)
Class Class III peroxidase    [Orthogroup: Prx090]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx28
start..stop		 S start..stop
TaPrx04-2D 493 3.19e-178 1..313 1..312
ZmPrx48 449 7.88e-161 1..313 1..313
SbPrx134 449 1.27e-160 1..313 1..314
SbPrx135 446 1.91e-159 1..313 1..313
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7822' 'join(37539290..37539496,37539618..37539797,37539894..37540445)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 37539290..37539496 205 N° 2 37539618..37539797 178 N° 3 37539894..37540445 550  
join(37539290..37539496,37539618..37539797,37539894..37540445)


exon

Literature and cross-references BdiPrx28(Bradi1g41115)
DNA ref. Phytozome 12:   Bd1 (37539290..37540445)
EST ref. GenBank:   GT856417.1 [3' end]  GT856418.1 [3' end]
Protein sequence: BdiPrx28(Bradi1g41115)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313 (291)
PWM (Da):   %s   33610.71 (31341.6) Transmb domain:   %s   i55-77o
PI (pH):   %s   6.34 (5.76) Peptide Signal:   %s   cut: 23 range:23-313
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAPTFMHCLLAICLLSCAAHAQLSADFYADCCPSLESIVRTEMI
KAISRERRIAAKLLRVFFHDCFVQGCDGSVLLDAPGEKTAIPNNNSLLGYEVIDTIKASVEAACPGVVSCADILALTARDGTFLLGGPSWSVPLGRRDSRGGNQSLANDNLPAPDSNLTVLIELFGRQGLSPAEMTTLSGAHTI
GFSQCLNFRDRIYNDANISPSFAALRRQTCPRVGGNTTLAPIDVQTPGAFDTDYYQNLLTRRGLFRSDQALFNGGSQDALVRQYSFNPALFRRDFAAAMIKMGNICPLTGDDGEIRANCH
VANS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1), 2 ESTs. Incorrect prediction from Phytozome (exon is missing). Strain="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCTCCTACCTTCATGCACTGCCTGCTCGCCATCTGTCTGCTCTCCTGTGCTGCCCACGCGCAGCTCTCGGCCGACTTCTACGCCGACTGCTGCCCCAGCTTGGAGTCCATCGTG
CGTACGGAGATGATCAAGGCCATCAGCCGCGAGCGGCGCATCGCAGCGAAGCTTCTCAGGGTCTTCTTCCACGACTGCTTCGTACAGAGGTGATAATCCATTCTTCCACGACTGCTTCGT
TCATGTGATAATCCATTCTTCCACGACTGCTTCAGGTGATTTGAGCGCGCGCGCGTGTCTAACTCTCGTACATGCATGCATGTTATGTAGGGGTGTGACGGGTCGGTTCTTCTGGACGCC
CCAGGTGAGAAAACTGCCATACCCAACAATAACTCCTTGCTGGGCTACGAAGTCATCGACACCATCAAGGCTAGCGTGGAGGCAGCGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTC
GCGCTTACCGCCCGCGACGGAACGTTTCTGTGGTACGTAGTACGTGCAAACTACTAAAACTTCACCGGCTCGATCAGTACGTTTATATAGGAGCTTAAATGCTTAATTTGCCTGATATAT
GGATGCAGCTGGGCGGACCAAGCTGGAGCGTGCCGCTGGGCCGGCGCGACTCGAGGGGCGGGAACCAGTCTCTGGCGAACGACAACCTCCCAGCGCCGGACTCCAACCTCACCGTGCTAA
TCGAGCTCTTCGGCAGGCAGGGGCTCTCGCCAGCCGAGATGACGACGCTGTCCGGCGCGCACACCATTGGCTTCAGCCAGTGCCTCAACTTCCGGGACCGGATCTACAACGACGCCAACA
TCAGCCCGTCCTTCGCCGCGCTGCGGCGGCAGACGTGCCCACGCGTGGGCGGCAACACCACCCTGGCGCCTATCGACGTGCAGACCCCGGGGGCGTTCGACACCGACTACTACCAGAACC
TGCTGACGAGACGCGGCCTGTTCCGCTCCGACCAGGCGCTCTTCAACGGCGGGTCGCAGGACGCGCTGGTGCGGCAGTACAGCTTCAACCCGGCCCTCTTCCGGAGGGACTTCGCGGCGG
CCATGATAAAGATGGGCAACATATGCCCGCTCACCGGCGATGACGGTGAGATCAGGGCTAATTGCCACGTCGCCAACAGC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCTCCTACCTTCATGCACTGCCTGCTCGCCATCTGTCTGCTCTCCTGTGCTGCCCACGCGCAGCTCTCGGCCGACTTCTACGCCGACTGCTGCCCCAGCTTGGAGTCCATCGTG
CGTACGGAGATGATCAAGGCCATCAGCCGCGAGCGGCGCATCGCAGCGAAGCTTCTCAGGGTCTTCTTCCACGACTGCTTCGTACAGGGGTGTGACGGGTCGGTTCTTCTGGACGCCCCA
GGTGAGAAAACTGCCATACCCAACAATAACTCCTTGCTGGGCTACGAAGTCATCGACACCATCAAGGCTAGCGTGGAGGCAGCGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCG
CTTACCGCCCGCGACGGAACGTTTCTGCTGGGCGGACCAAGCTGGAGCGTGCCGCTGGGCCGGCGCGACTCGAGGGGCGGGAACCAGTCTCTGGCGAACGACAACCTCCCAGCGCCGGAC
TCCAACCTCACCGTGCTAATCGAGCTCTTCGGCAGGCAGGGGCTCTCGCCAGCCGAGATGACGACGCTGTCCGGCGCGCACACCATTGGCTTCAGCCAGTGCCTCAACTTCCGGGACCGG
ATCTACAACGACGCCAACATCAGCCCGTCCTTCGCCGCGCTGCGGCGGCAGACGTGCCCACGCGTGGGCGGCAACACCACCCTGGCGCCTATCGACGTGCAGACCCCGGGGGCGTTCGAC
ACCGACTACTACCAGAACCTGCTGACGAGACGCGGCCTGTTCCGCTCCGACCAGGCGCTCTTCAACGGCGGGTCGCAGGACGCGCTGGTGCGGCAGTACAGCTTCAACCCGGCCCTCTTC
CGGAGGGACTTCGCGGCGGCCATGATAAAGATGGGCAACATATGCCCGCTCACCGGCGATGACGGTGAGATCAGGGCTAATTGCCACGTCGCCAACAGC

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTTCCAAAA CATTTTCTTT CATATACATA TAATTATAAT GTACTACACA AATTTACATT ATTGACAGAT ATAACGTCGT ATACAAACAT CATTGTACAC GAGAGATATT CAGACAAACC  AACGGCAGAG TACGTAATTT GAAACACAAT ACGGAGGATA TAGTAGGCCC ACCTGATGTC CCATATACTT CCATACCACG GCGATGTATA TATACTGTGC GTCACTTCTT GTGATGGCAC  CACTTATTCT ACTCACTGTC GCTGTTATAT GCGAGAGTTG ACATAAATAT CTACTTAGCA GTCGTCGATC GTACGGCTCA TATCATCTCG ATCAGCTAAT TACTAGCTGT TGGCGACGTG  GCAATTAGCC CTGATCTCAC CGTCATCGCC GGTGAGCGGG CATATGTTGC CCATCTTTAT CATGGCCGCC GCGAAGTCCC TCCGGAAGAG GGCCGGGTTG AAGCTGTACT GCCGCACCAG 
CGCGTCCTGC GACCCGCCGT TGAAGAGCGC CTGGTCGGAG CGGAACAGGC CGCGTCTCGT CAGCAGGTTC TGGTAGTAGT CGGTGTC 

Retrieve as FASTA