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Entry information : BdiPrx72 (Bradi2g20840)
Entry ID 7826
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx72 (Bradi2g20840)
Name (synonym) BdiPrx72 (Bradi2g20840)
Class Class III peroxidase    [Orthogroup: Prx042]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx72
start..stop		 S start..stop
BdiPrx73 593 0 19..327 18..326
BdiPrx71 577 0 19..327 18..323
TaPrx37-1A 564 0 24..327 23..326
TaPrx37-1D 563 0 24..327 23..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7826' 'complement(join(18274786..18275373,18275465..18275650,18275765..18275974))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 18275765..18275974 208 N° 2 18275465..18275650 184 N° 3 18274786..18275373 586  
complement(join(18274786..18275373,18275465..18275650,18275765..18275974))


exon

Literature and cross-references BdiPrx72 (Bradi2g20840)
DNA ref. Phytozome 12:   Bd2 (18275974..18274786)
EST ref. GenBank:   GT829009.1 [3' end]  GT829010.1 [3' end]
Protein sequence: BdiPrx72 (Bradi2g20840)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (304)
PWM (Da):   %s   35407.86 (33152.7) Transmb domain:   %s   i42-64o
PI (pH):   %s   7.13 (6.62) Peptide Signal:   %s   cut: 24 range:24-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASRAAMMQALLLAALAVGSARAQLHEKFYSESCPSVEAIVRKEL
VSALSTTPNLAAALLRMHFHDCFVRGCDGSVLLDSANKTAEKDAVPNQTLRGFGFVDRVKAAVEKACPDTVSCADVLAILARDSVWLTKGPFWEVPLGRRDGSVSISNETDQLPPPTANFTVLTQLFAAKNLDAKDLVVLSAGHT
IGISHCFSFTDRLFNFTGKVNPTDIDPTLDTEYMAKLRGKCRSLNDNTTVVEMDPGSFKTFDLDYFTVVAKRRGLFHSDGALLTNDFTRAYVQRHAGGAFKEEFFADFAASMVKMGNADV
LTGSQGEIRKKCSVPNH*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2,intron 1 and 2), 2 ESTs.
Strain="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCAAGGGCTGCGATGATGCAGGCGCTGCTGCTGGCCGCGTTGGCGGTGGGGAGCGCGCGGGCGCAGCTGCACGAGAAGTTCTACAGCGAGTCGTGCCCCAGCGTGGAGGCCATC
GTCAGGAAGGAGCTGGTGAGCGCGCTCTCGACCACGCCTAACCTCGCCGCCGCGCTCCTCAGGATGCACTTCCATGACTGCTTCGTCAGGGTAAGTTTACTAAGTACTCTGTCCAGTTTA
AGTTCTAAACCCAAAATATTTCAGAGGCCGTTCCCTGGCCCCTGGGCAGTCTCCTGATGTGAATGAACGAATGTATCAATGAAGGGGGGTGCGACGGGTCGGTTCTGCTGGACTCAGCGA
ACAAGACGGCGGAGAAGGACGCGGTGCCCAACCAGACGCTGCGCGGATTCGGCTTCGTCGACAGGGTGAAGGCCGCCGTGGAGAAGGCCTGCCCCGACACCGTCTCCTGCGCCGACGTGC
TCGCCATCTTGGCCAGAGACTCAGTCTGGCTGGTGAGTGTTATCGTAGTACTAAGCAAAGTTGCAAATGACAATATGTACATGTATTGTATGTAGCTTAATGCTCTGCTCATGGTTCTAT
CAGACACCAAGGGCCCATTCTGGGAAGTTCCTCTCGGGCGGCGAGACGGCAGCGTGTCCATCTCCAACGAGACCGACCAGCTCCCACCCCCTACCGCCAACTTCACCGTGCTGACGCAGC
TCTTCGCCGCCAAGAACCTCGACGCCAAGGACCTCGTCGTCCTCTCGGCCGGCCACACCATCGGGATCTCGCATTGCTTCTCCTTCACCGACCGCCTCTTCAACTTCACCGGCAAGGTCA
ACCCCACCGACATCGACCCCACGCTCGACACGGAGTACATGGCCAAGCTCAGGGGCAAGTGCAGGAGCCTCAACGACAACACCACCGTCGTCGAGATGGACCCCGGCAGCTTCAAGACCT
TCGATCTCGACTACTTCACCGTCGTGGCCAAGCGGAGGGGACTCTTCCACTCCGACGGCGCGCTGCTCACCAACGACTTCACCCGCGCCTACGTGCAGCGCCACGCTGGTGGTGCCTTCA
AGGAGGAGTTCTTCGCCGACTTCGCCGCGTCCATGGTCAAGATGGGCAACGCCGACGTGCTCACCGGTAGCCAGGGCGAGATCAGGAAGAAGTGCTCCGTGCCTAATCATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCAAGGGCTGCGATGATGCAGGCGCTGCTGCTGGCCGCGTTGGCGGTGGGGAGCGCGCGGGCGCAGCTGCACGAGAAGTTCTACAGCGAGTCGTGCCCCAGCGTGGAGGCCATC
GTCAGGAAGGAGCTGGTGAGCGCGCTCTCGACCACGCCTAACCTCGCCGCCGCGCTCCTCAGGATGCACTTCCATGACTGCTTCGTCAGGGGGTGCGACGGGTCGGTTCTGCTGGACTCA
GCGAACAAGACGGCGGAGAAGGACGCGGTGCCCAACCAGACGCTGCGCGGATTCGGCTTCGTCGACAGGGTGAAGGCCGCCGTGGAGAAGGCCTGCCCCGACACCGTCTCCTGCGCCGAC
GTGCTCGCCATCTTGGCCAGAGACTCAGTCTGGCTGACCAAGGGCCCATTCTGGGAAGTTCCTCTCGGGCGGCGAGACGGCAGCGTGTCCATCTCCAACGAGACCGACCAGCTCCCACCC
CCTACCGCCAACTTCACCGTGCTGACGCAGCTCTTCGCCGCCAAGAACCTCGACGCCAAGGACCTCGTCGTCCTCTCGGCCGGCCACACCATCGGGATCTCGCATTGCTTCTCCTTCACC
GACCGCCTCTTCAACTTCACCGGCAAGGTCAACCCCACCGACATCGACCCCACGCTCGACACGGAGTACATGGCCAAGCTCAGGGGCAAGTGCAGGAGCCTCAACGACAACACCACCGTC
GTCGAGATGGACCCCGGCAGCTTCAAGACCTTCGATCTCGACTACTTCACCGTCGTGGCCAAGCGGAGGGGACTCTTCCACTCCGACGGCGCGCTGCTCACCAACGACTTCACCCGCGCC
TACGTGCAGCGCCACGCTGGTGGTGCCTTCAAGGAGGAGTTCTTCGCCGACTTCGCCGCGTCCATGGTCAAGATGGGCAACGCCGACGTGCTCACCGGTAGCCAGGGCGAGATCAGGAAG
AAGTGCTCCGTGCCTAATCATTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCAGAAGCAG AAGCAGCAGC AGTCCAAAGC AACGTTAGCT TCTCCTGATT TGGTAGCTAA TCGAGCTTCT TGTCGTGGAA GATGGCGTCA AGGGCTGCGA TGATGCAGGC GCTGCTGCTG  GCCGCGTTGG CGGTGGGGAG CGCGCGGGCG CAGCTGCACG AGAAGTTCTA CAGCGAGTCG TGCCCCAGCG TGGAGGCCAT CGTCAGGAAG GAGCTGGTGA GCGCGCTCTC GACCACGCCT  AACCTCGCCG CCGCGCTCCT CAGGATGCAC TTCCATGACT GCTTCGTCAG GGGGTGCGAC GGGTCGGTTC TGCTGGACTC AGCGAACAAG ACGGCGGAGA AGGACGCGGT GCCCAACCAG  ACGCTGCGCG GATTCGGCTT CGTCGACAGG GTGAAGGCCG CCGTGGAGAA GGCCTGCCCC GACACCGTCT CCTGCGCCGA CGTGCTCGCC ATCTTGGCCA GAGACTCAGT CTGGCTGACC  AAGGGCCCAT TCTGGGAAGT TCCTCTCGGG CGGCGAGACG GCAGCGTGTC CATCTCCAAC GAGACCGACC AGCTCCCACC CCCTACCGCC AACTTCACCG TGCTGACGCA GCTCTTCGCC  GCCAAGAACC TCGACGCCAA GGACCTCGTC GTCCTCTCGG CCGGCCACAC CATCGGGATC TCGCATTGCT TCTCCTTCAC CGACCGCCTC TTCAACTTCA CCGGCAAGGT CAACCCCACC  GACATCGACC CCACGCTCGA CACGGAGTAC ATGGCCAAGC TCAGGGGCAA GTGCAGGAGC CTCAACGACA ACACCACCGT CGTCGAGATG GACCCCGGCA GCTTCAAGAC CTTCGATCTC  GACTACTTCA CCGTCGTGGC CAAGCGGAGG GGACTCTTCC ACTCCGACGG CGCGCTGCTC ACCAACGACT TCACCCGCGC CTACGTGCAG CGCCACGCTG GTGGTGCCTT CAAGGAGGAG  TTCTTCGCCG ACTTCGCCGC GTCCATGGTC AAGATGGGCA ACGCCGACGT GCTCACCGGT AGCCAGGGCG AGATCAGGAA GAAGTGCTCC GTGCCTAATC ATTAGTTTAC AGAGCAAGTA  TGGGCTGGCA AAAGGATCTT GATTTGTGAC CGTCTTTTTT TCCTGTAGAT TTACTGTAAA GTTTCAGTTT TTTTACTTCC TTACCCATCT CCCCACTCCC CACCCCAAAT TTTCTGTTTG 
TTCAATTGAT TGTTTTGTCA CAGTTATGTA AAGTTTCCAC CAAGAACTCT GGATCATATA ATATATTTTG TTTTCTTGTT GAAATATAAA ATTGCCGGAT CA 

Retrieve as FASTA