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Entry information : BdiPrx01 (Bradi1g07780)
Entry ID 7827
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx01 (Bradi1g07780)
Name (synonym) BdiPrx01 (Bradi1g07780)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx01
start..stop		 S start..stop
OsPrx51 555 0 1..324 1..323
TaPrx145-1D 528 0 1..326 1..325
TaPrx145-1B 523 0 1..326 1..325
TaPrx145-1A 521 0 1..326 1..325
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5515031..5515243 211 N° 2 5514703..5514903 199 N° 3 5514379..5514544 164 N° 4 5513277..5513677 399
complement(join(5513277..5513677,5514379..5514544,5514703..5514903,5515031..5515 243))


exon

Literature and cross-references BdiPrx01 (Bradi1g07780)
DNA ref. Phytozome 12:   Bd1 (5515243..5513277)
EST ref. GenBank:   DV471270.1 [Fragment]  DV471487.1 [Fragment]
Protein sequence: BdiPrx01 (Bradi1g07780)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   33910.73 (31633.5)  
PI (pH):   %s   4.55 (4.39) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGAGIRLLAALLVLASAGTPRCAAQLRQNYYDAVCPGVESIVRDA
VAKKVNDTPVAVGATVRLFFHDCFVQGCDASVIVVSSGNNTAEKDHSANLSLAGDGFDTVIKAKAAVDAVPQCTNQVSCADILTMATRDVIALAGGPAYAVELGRLDGLSSLASNVDGNLPPPSFDLDQLNAMFTANNLSQTDMIA
LSAAHTVGFAHCGTFAGRIQTASQDPTMDSGYASQLQAACPADVDPNVALSIDPVTPKVFDNQYFVNLQKGMGLFTSDQVLYSDTRSRPTVDAWAANSSDFQAAFVAAMTNLGRVGVKTD
PSLGNIRRDCAVFNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1, 2 and 3), 2 ESTs. Strain="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCGCGGGGATTAGGCTCCTGGCGGCGCTCCTGGTGCTGGCGTCCGCCGGGACGCCGCGATGCGCGGCGCAGCTCCGGCAGAACTACTACGACGCCGTCTGCCCCGGCGTGGAGAGC
ATCGTGCGCGACGCCGTGGCCAAGAAGGTCAACGACACGCCCGTCGCCGTCGGCGCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGGTCCGTTCCTTTTCCTCTTCCCCCTTT
CCCCTGCCTCAGGGAGGCGCGTATACATTTGGACATTTGGTCGATTTCTGCGTGTGTCAGTTGATTGCCTCTGACGAACTGTACCGGCCGTGAAATGCAGGGGGCTGTGACGCGTCCGTC
ATCGTGGTGTCGTCGGGGAACAACACGGCGGAGAAGGACCACTCGGCGAACCTCTCGCTGGCCGGCGACGGCTTCGACACGGTCATCAAGGCCAAGGCGGCCGTCGACGCCGTGCCGCAG
TGCACCAACCAGGTCTCCTGCGCGGACATCCTCACCATGGCCACCCGGGATGTCATCGCATTGGTATGTAGCTGGACTCCGCCTCCTGGAGCCTGCCTGGAGTGGACACACGCCCACTTT
ATTTTTCGAGATCTACCAAAAGTTTCCGGGCTTTTGAGGACATATCTGCAGCTAAAGTCTCTGAAAACTGTGCGTCTTTTTCGGGTTTTTTTTTTCTGCAGGCGCCGGTGGCCCGGCGTA
CGCCGTGGAACTCGGGAGGCTGGACGGGCTGAGCTCGCTGGCGAGCAACGTCGACGGGAACCTGCCGCCGCCGTCGTTCGACCTGGACCAGCTGAACGCCATGTTCACCGCGAACAACCT
GTCGCAGACTGACATGATTGCCCTCTCTGGTAAGCAATTATTAAAGAGGTTTTTACTGCACTAACCGCCGCCCCAAATTACGCTGCTTTAGCTGCTGTACTAGTCGTTCTGTCGTGCAAC
CCCATGTGCTTTGTTTGTCTGACAAAGTACATTTGTCTAGCAAAGGGCCCTAACGGTGCGATTAATGAAGCATTTCGTGTGCGGCTCAAGAGGTTTGTTGGTAGCAGTAAAAACTGTCGT
ATCTCGCCTTGATTAACAGCAGTCTGAGTTTATTTAGGTTCCAGTACACCGAACCTGATAGTGGAGTGTGAGTAGCTGGTCGGTAGATCTGAAAGGAGTCAAACCATGGAGACTAGTACA
GCCTTGCTTGCACGTGAAAGAAAGATCAGCCGTGTGTTATTTTTGTAGCATATCCTTTGCCATAATCGCACCCTGCCAGTTCGCAACCGGGGAAGAGTCCAACTCCCTAATTTCGGCCCA
TCATTCCACAAACTATGGGCCTGCCAAATCAGCACTCTCACTCTAAGGAAACTGCAAATTCTGTCCTAGGTTCAGTCCCATGGATCTTTAAAGCTAGTTCTGCTCCGAAAAATCAAATGT
TTTTTTTGACAGCACAGAAACATCAAATGTTAATGGTACTGGAGTACTGTAGTTACTACGCCTGTCCGTGCCTTCGATTCAAATCTCGATTGACTCAGGAAAAAACAACACTTGTGTTTC
TTCATTGCAGCGCGGCGCACACGGTGGGGTTCGCGCACTGCGGCACGTTCGCGGGGCGGATCCAGACGGCGTCCCAGGACCCGACGATGGACTCCGGGTACGCGTCGCAGCTGCAGGCGG
CGTGCCCGGCGGACGTGGACCCGAACGTGGCGCTGTCCATCGACCCGGTGACCCCGAAAGTCTTCGACAACCAGTACTTCGTCAACCTGCAGAAAGGGATGGGCCTCTTCACCTCCGACC
AGGTGCTCTACTCCGACACCCGGTCCCGCCCCACCGTCGACGCCTGGGCGGCCAACAGCTCCGACTTCCAGGCCGCCTTCGTCGCCGCCATGACCAACCTCGGCCGCGTCGGGGTCAAGA
CCGACCCGTCCCTGGGCAACATACGCCGCGACTGCGCCGTCTTCAACTCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCGCGGGGATTAGGCTCCTGGCGGCGCTCCTGGTGCTGGCGTCCGCCGGGACGCCGCGATGCGCGGCGCAGCTCCGGCAGAACTACTACGACGCCGTCTGCCCCGGCGTGGAGAGC
ATCGTGCGCGACGCCGTGGCCAAGAAGGTCAACGACACGCCCGTCGCCGTCGGCGCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGGGCTGTGACGCGTCCGTCATCGTGGTG
TCGTCGGGGAACAACACGGCGGAGAAGGACCACTCGGCGAACCTCTCGCTGGCCGGCGACGGCTTCGACACGGTCATCAAGGCCAAGGCGGCCGTCGACGCCGTGCCGCAGTGCACCAAC
CAGGTCTCCTGCGCGGACATCCTCACCATGGCCACCCGGGATGTCATCGCATTGGCCGGTGGCCCGGCGTACGCCGTGGAACTCGGGAGGCTGGACGGGCTGAGCTCGCTGGCGAGCAAC
GTCGACGGGAACCTGCCGCCGCCGTCGTTCGACCTGGACCAGCTGAACGCCATGTTCACCGCGAACAACCTGTCGCAGACTGACATGATTGCCCTCTCTGCGGCGCACACGGTGGGGTTC
GCGCACTGCGGCACGTTCGCGGGGCGGATCCAGACGGCGTCCCAGGACCCGACGATGGACTCCGGGTACGCGTCGCAGCTGCAGGCGGCGTGCCCGGCGGACGTGGACCCGAACGTGGCG
CTGTCCATCGACCCGGTGACCCCGAAAGTCTTCGACAACCAGTACTTCGTCAACCTGCAGAAAGGGATGGGCCTCTTCACCTCCGACCAGGTGCTCTACTCCGACACCCGGTCCCGCCCC
ACCGTCGACGCCTGGGCGGCCAACAGCTCCGACTTCCAGGCCGCCTTCGTCGCCGCCATGACCAACCTCGGCCGCGTCGGGGTCAAGACCGACCCGTCCCTGGGCAACATACGCCGCGAC
TGCGCCGTCTTCAACTCTTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCGCACAGCC TCCTCTCAAG CTCTCTCAGC GACATCCAAC GGCCTCCGCG TCATCACTAG CTCGCCGCGC TAGACACTGT CATAAGCCAG CCGCACTAGC TTCGATTCGA CGCAGAAGGC  GTCGGGAGAG CTTAGGTAGG TAGCTAGAGG GACGGCATGG GCGCGGGGAT TAGGCTCCTG GCGGCGCTCC TGGTGCTGGC GTCCGCCGGG ACGCCGCGAT GCGCGGCGCA GCTCCGGCAG  AACTACTACG ACGCCGTCTG CCCCGGCGTG GAGAGCATCG TGCGCGACGC CGTGGCCAAG AAGGTCAACG ACACGCCCGT CGCCGTCGGC GCCACCGTCC GCCTCTTCTT CCACGACTGC  TTCGTCCAGG GCTGTGACGC GTCCGTCATC GTGGTGTCGT CGGGGAACAA CACGGCGGAG AAGGACCACT CGGCGAACCT CTCGCTGGCC GGCGACGGCT TCGACACGGT CATCAAGGCC  AAGGCGGCCG TCGACGCCGT GCCGCAGTGC ACCAACCAGG TCTCCTGCGC GGACATCCTC ACCATGGCCA CCCGGGATGT CATCGCATTG GCCGGTGGCC CGGCGTACGC CGTGGAACTC  GGGAGGCTGG ACGGGCTGAG CTCGCTGGCG AGCAACGTCG ACGGGAACCT GCCGCCGCCG TCGTTCGACC TGGACCAGCT GAACGCCATG TTCACCGCGA ACAACCTGTC GCAGACTGAC  ATGATTGCCC TCTCTGCGGC GCACACGGTG GGGTTCGCGC ACTGCGGCAC GTTCGCGGGG CGGATCCAGA CGGCGTCCCA GGACCCGACG ATGGACTCCG GGTACGCGTC GCAGCTGCAG  GCGGCGTGCC CGGCGGACGT GGACCCGAAC GTGGCGCTGT CCATCGACCC GGTGACCCCG AAAGTCTTCG ACAACCAGTA CTTCGTCAAC CTGCAGAAAG GGATGGGCCT CTTCACCTCC  GACCAGGTGC TCTACTCCGA CACCCGGTCC CGCCCCACCG TCGACGCCTG GGCGGCCAAC AGCTCCGACT TCCAGGCCGC CTTCGTCGCC GCCATGACCA ACCTCGGCCG CGTCGGGGTC  AAGACCGACC CGTCCCTGGG CAACATACGC CGCGACTGCG CCGTCTTCAA CTCTTGAATT TGATGTCTGA ATCTTCAATC TTGATACTGC TAGATGGGAT CGATGCGTGG AGATATCATC  AATTGTTCAT AGTTAGTTGG GCCACTTTTG GGTGGTGCTG AAGTTATATA CAGTTAGCTT TTTCAGAACA AAATGTTTTA GTTCTAATCG ATCAGGAGGT TAATGTGAGG CTGTTCGGCA  TTTGTTCTGG AGTTTGTTGG GCATTTTATT ACTTACCTAG CCAAATGTAT TCATTGTGTG TGTGTTTAAT ATTGGAGGAA GAATCATTCG TATGTTTTCT TATGCATTGG TCGATTCGGA 
GAGTTTTGGT ATGGCCAATG AAGTCGGAG 

Retrieve as FASTA