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Entry information : BdiPrx18 (Bradi1g27910)
Entry ID 7836
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx18 (Bradi1g27910)
Name (synonym) BdiPrx18 (Bradi1g27910)
Class Class III peroxidase    [Orthogroup: Prx152]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx18
start..stop		 S start..stop
TaPrx56-1D 502 0 1..329 1..330
TaPrx56-1B 501 0 1..329 1..330
TaPrx56-1A 501 1.37e-180 1..329 1..330
TaPrx16-1A 492 5.89e-177 1..328 1..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7836' 'join(23086027..23086260,23086360..23086542,23086654..23086819,23087085..23087491)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 23086027..23086260 232 N° 2 23086360..23086542 181 N° 3 23086654..23086819 164 N° 4 23087085..23087491 405
join(23086027..23086260,23086360..23086542,23086654..23086819,23087085..23087491 )


exon

Literature and cross-references BdiPrx18 (Bradi1g27910)
DNA ref. Phytozome 12:   Bd1 (23086027..23087491)
Protein sequence: BdiPrx18 (Bradi1g27910)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (303)
PWM (Da):   %s   35214.28 (32374.9) Transmb domain:   %s   i12-34o
PI (pH):   %s   4.8 (4.61) Peptide Signal:   %s   cut: 27 range:27-329
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEYSHSRLLLVCSVLMLCLCSGVAKCDKLTSELTGDFYDYTCPGL
YTIVQQHVFAAMRDEMRMGASLLRLHFHDCFVNGCDASILLVGETGEQFARPNQNSVRGYEVIDAMKADIESVCPGVVSCADIVALAAAYGVLFSGGPYYEVLLGRKDGLVANKTGAENGLPAPFEPVSSIVQKFGDVGLDTKDVVVLSGAHT
IGRARCGLFNNRLTSSGDPTLDSKMAANLQSLCTTGGDNQTTALDVESADVFDKQYYQNLLSKKGLLSSDQNLFSGAEDVVKATTKALVQTYSDDGEQFFMDFGASMVKMGSIKKTGVPG
EIRTNCRVPNK

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1, 2 and 3), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACTCTCACAGCAGGTTGCTCCTTGTATGCTCAGTTCTTATGCTGTGCCTCTGCAGTGGAGTCGCAAAGTGCGATAAGTTAACCAGTGAGCTAACGGGCGATTTCTATGACTAC
ACATGCCCCGGTTTGTATACCATCGTCCAGCAGCATGTGTTTGCTGCCATGAGGGATGAGATGAGGATGGGAGCTTCCCTGCTCAGGCTCCATTTCCATGATTGCTTTGTCAATATGTAA
CTTAAACATCCTCTGAACTTAACTCTGAATGTTTGTTGTACATCTACAGTTGCGTTGAAGTTCAGTGATAACTTTTTGTGTCGTGATGTGTTCAGGGGTGTGATGCTTCGATCCTGTTGG
TTGGCGAAACTGGCGAGCAATTTGCGCGTCCCAACCAGAACTCTGTCAGAGGGTACGAGGTCATCGACGCGATGAAGGCCGATATTGAGAGTGTTTGTCCTGGGGTGGTGTCATGTGCTG
ACATTGTAGCCCTTGCAGCTGCCTATGGAGTACTCTTTTTGTGAGCATTCTTACATCTTATAGTCCATTTTCTTCAGATATATTCAGCCTGTCAGACAAAGTACTAGCTCTGGAAATTTA
ATTTGCTTATGACATGTGTTGACTTGGTCAGAGTGGAGGGCCATACTATGAAGTTCTTCTGGGTAGAAAGGACGGCCTGGTAGCAAATAAGACTGGAGCTGAGAATGGCCTGCCCGCACC
GTTTGAACCGGTCAGCTCCATCGTACAGAAGTTCGGCGATGTCGGCCTCGACACGAAAGATGTTGTGGTCTTGTCAGAGGTATCACACTAATCGTCACAAAAACCAATCTATCTATCTCA
AGGTTCAGAGAAACTTGATTGAAATTCTTTGCTACTTCAATTCCTGAAATTGCCACGCTGTGACCAAACATGCGCAATTCAGACCAGAAGCAACTCTGTTGTCAGTTCCCAAACTAAATC
GTAGCTGACATGGAAAAACTGCCACAGAGGTTTATATGAACAATCATCACGTAACACTCCTAATATATATACGACTGAATGCACAATGGAAATAAAATTTACAGGAGCCCACACGATCGG
GCGTGCCCGGTGCGGGCTGTTCAACAACCGCCTCACGTCGTCAGGCGACCCGACGCTGGACTCCAAAATGGCCGCCAACCTGCAGAGCCTCTGCACCACCGGGGGCGACAACCAGACCAC
GGCGCTGGACGTCGAATCCGCCGACGTGTTCGACAAGCAATACTACCAGAACCTGCTGAGCAAGAAGGGCCTCCTGTCCTCGGACCAGAACCTCTTCTCCGGCGCCGAGGACGTCGTCAA
GGCCACCACCAAGGCGCTGGTGCAGACGTACAGCGACGACGGCGAGCAGTTCTTCATGGACTTCGGCGCCTCCATGGTGAAGATGGGGAGCATCAAGAAGACGGGAGTGCCCGGCGAAAT
CCGCACCAACTGCAGGGTTCCCAATAAGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACTCTCACAGCAGGTTGCTCCTTGTATGCTCAGTTCTTATGCTGTGCCTCTGCAGTGGAGTCGCAAAGTGCGATAAGTTAACCAGTGAGCTAACGGGCGATTTCTATGACTAC
ACATGCCCCGGTTTGTATACCATCGTCCAGCAGCATGTGTTTGCTGCCATGAGGGATGAGATGAGGATGGGAGCTTCCCTGCTCAGGCTCCATTTCCATGATTGCTTTGTCAATGGGTGT
GATGCTTCGATCCTGTTGGTTGGCGAAACTGGCGAGCAATTTGCGCGTCCCAACCAGAACTCTGTCAGAGGGTACGAGGTCATCGACGCGATGAAGGCCGATATTGAGAGTGTTTGTCCT
GGGGTGGTGTCATGTGCTGACATTGTAGCCCTTGCAGCTGCCTATGGAGTACTCTTTAGTGGAGGGCCATACTATGAAGTTCTTCTGGGTAGAAAGGACGGCCTGGTAGCAAATAAGACT
GGAGCTGAGAATGGCCTGCCCGCACCGTTTGAACCGGTCAGCTCCATCGTACAGAAGTTCGGCGATGTCGGCCTCGACACGAAAGATGTTGTGGTCTTGTCAGGAGCCCACACGATCGGG
CGTGCCCGGTGCGGGCTGTTCAACAACCGCCTCACGTCGTCAGGCGACCCGACGCTGGACTCCAAAATGGCCGCCAACCTGCAGAGCCTCTGCACCACCGGGGGCGACAACCAGACCACG
GCGCTGGACGTCGAATCCGCCGACGTGTTCGACAAGCAATACTACCAGAACCTGCTGAGCAAGAAGGGCCTCCTGTCCTCGGACCAGAACCTCTTCTCCGGCGCCGAGGACGTCGTCAAG
GCCACCACCAAGGCGCTGGTGCAGACGTACAGCGACGACGGCGAGCAGTTCTTCATGGACTTCGGCGCCTCCATGGTGAAGATGGGGAGCATCAAGAAGACGGGAGTGCCCGGCGAAATC
CGCACCAACTGCAGGGTTCCCAATAAGTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCCTGCAAGC AGTGCAATAC AGAGTCTAGT AAGTAAAACT GTAAAGGGTT GAGACATGGA GTACTCTCAC AGCAGGTTGC TCCTTGTATG CTCAGTTCTT ATGCTGTGCC TCTGCAGTGG  AGTCGCAAAG TGCGATAAGT TAACCAGTGA GCTAACGGGC GATTTCTATG ACTACACATG CCCCGGTTTG TATACCATCG TCCAGCAGCA TGTGTTTGCT GCCATGAGGG ATGAGATGAG  GATGGGAGCT TCCCTGCTCA GGCTCCATTT CCATGATTGC TTTGTCAATG GGTGTGATGC TTCGATCCTG TTGGTTGGCG AAACTGGCGA GCAATTTGCG CGTCCCAACC AGAACTCTGT  CAGAGGGTAC GAGGTCATCG ACGCGATGAA GGCCGATATT GAGAGTGTTT GTCCTGGGGT GGTGTCATGT GCTGACATTG TAGCCCTTGC AGCTGCCTAT GGAGTACTCT TTAGTGGAGG  GCCATACTAT GAAGTTCTTC TGGGTAGAAA GGACGGCCTG GTAGCAAATA AGACTGGAGC TGAGAATGGC CTGCCCGCAC CGTTTGAACC GGTCAGCTCC ATCGTACAGA AGTTCGGCGA  TGTCGGCCTC GACACGAAAG ATGTTGTGGT CTTGTCAGGA GCCCACACGA TCGGGCGTGC CCGGTGCGGG CTGTTCAACA ACCGCCTCAC GTCGTCAGGC GACCCGACGC TGGACTCCAA  AATGGCCGCC AACCTGCAGA GCCTCTGCAC CACCGGGGGC GACAACCAGA CCACGGCGCT GGACGTCGAA TCCGCCGACG TGTTCGACAA GCAATACTAC CAGAACCTGC TGAGCAAGAA  GGGCCTCCTG TCCTCGGACC AGAACCTCTT CTCCGGCGCC GAGGACGTCG TCAAGGCCAC CACCAAGGCG CTGGTGCAGA CGTACAGCGA CGACGGCGAG CAGTTCTTCA TGGACTTCGG  CGCCTCCATG GTGAAGATGG GGAGCATCAA GAAGACGGGA GTGCCCGGCG AAATCCGCAC CAACTGCAGG GTTCCCAATA AGTGAGCAAC TGCTGGCTAG CAGAGTTCAT CAGCTTCTTG  ACCATCTTGC AAATAACTCA GTCCTTTACA TGTAATGTGT AATATTTAGA TGTTACTACA TGCATGGCAT GCTCGAGAAA CAAGATGAAG AATCAATAAT AATGATGTTA CTCAGAAGAT 
AACGTACAAA CAGATCAATT GATGTGCATG TTGATTTGAT CTGACTCCAT TCAAT 

Retrieve as FASTA