Entry information : BdiPrx19 (Bradi1g27920)
Entry ID 7837
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx19 (Bradi1g27920)
Name (synonym) BdiPrx19 (Bradi1g27920)
Class Class III peroxidase    [Orthogroup: Prx068]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue types Callus
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx19
start..stop
S start..stop
HvPrx05 537 0 25..339 30..343
TaPrx12-1D 535 0 34..341 38..345
TaPrx12-1B 535 0 34..341 37..344
TaPrx12-1A 528 0 34..341 40..347
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7837' 'join(23097909..23098340,23098550..23098715,23098926..23099353)' Exons


exon

Literature and cross-references BdiPrx19 (Bradi1g27920)
Literature Vogel,J.P., Gu,Y.Q., Twigg,P., Lazo,G.R., Laudencia-Chingcuanco,D., Hayden,D.M., Donze,T.J., Vivian,L.A., Stamova,B. and Coleman-Derr,D.
EST sequencing and phylogenetic analysis of the model grass
Brachypodium distachyon.
Theor Appl Genet 113 (2), 186-195 (2006).


DNA ref. Phytozome 12:   Bd1 (23097909..23099353)
EST ref. GenBank:   DV469507.1 [5' end]  DV472609.1 [5' end]  DV486886.1 [3' end]  GT816637.1 [3' end]  GT822178.1 [3' end]
Protein sequence: BdiPrx19 (Bradi1g27920)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341 (312)
PWM (Da):   %s   36368.9 (33625.5)  
PI (pH):   %s   5.35 (4.99) Peptide Signal:   %s   cut: 30 range:30-341
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPPSSPRVSLSGAALLAMACLLLHGGAAAAAGELCADYYDCTCP
DAYKIVQGVLIEAHRSDPRIFASLIRLHFHDCFVQGCDASLLLDSFPGMQSEKDARPNNNSARGFPVVDAAKAAL
EDACPGVVSCADILALAAEISVQL
SGGPGWSVLLGRLDGKTTDFNGAQNLPGPFDGLPMLKRKFRDVGLDDTTDLVALSGGHTFGRVQCQFVTGRLYNFSNTNMPDPTLDSRYRAFLSQR
CPRNGPAASLNDLDPTTPDAFDNHYFTNLEVNRGFLQSDQELKSDPGALTTTAPIVDRFASSQEAFFRSFALSMIKMGNIQPLTDPSKGEVRAHCARVNAS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 2 and 3), 5 ESTs. Cultivar="Bd21".
DNA
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CDS
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cDNA
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