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Entry information : BdiPrx48 (Bradi1g77130)
Entry ID 7842
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx48 (Bradi1g77130)
Name (synonym) BdiPrx48 (Bradi1g77130)
Class Class III peroxidase    [Orthogroup: Prx192]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx48
start..stop		 S start..stop
TaPrx143-1A 486 1.46e-174 11..338 14..325
TaPrx143-1D 484 4.92e-174 11..338 14..325
TaPrx143-1B 484 1.64e-173 11..338 14..335
OsPrx34 444 6.51e-158 28..338 25..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7842' 'join(73499969..73500190,73500315..73500512,73500602..73500767,73500863..73501293)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 73499969..73500190 220 N° 2 73500315..73500512 196 N° 3 73500602..73500767 164 N° 4 73500863..73501293 429
join(73499969..73500190,73500315..73500512,73500602..73500767,73500863..73501293 )


exon

Literature and cross-references BdiPrx48 (Bradi1g77130)
DNA ref. Phytozome 12:   Bd1 (73499969..73501293)
EST ref. GenBank:   DV469618.1 [Fragment]
Protein sequence: BdiPrx48 (Bradi1g77130)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (316)
PWM (Da):   %s   34638.01 (32411.9)  
PI (pH):   %s   4.73 (4.72) Peptide Signal:   %s   cut: 23 range:23-338
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVLVLAAAVLWLCCAGRDAQAQAPATQLQLGFYAQSCPQAEVIV
RDEVGRAVSGDPGLAAGLLRLHFHDCFVKGCDASVLLDTIAGNGSTAAEKDAAPNRTLRGFEVIDGAKKRLESACAGTVSCADILAFAARDSVVLTGGSPYGVPAGRRDGNESSASDAQASLPPPTANVAQLTQIFARNGLSQEDMVTL
SGAHTIGVTHCSSFSARLYSGDNNNSDNTGHDPAMDDATATELARRCPPGSADTVPMDLGGGGGPVDENAFDTGYFQALLAHRGLLGSDQALTADNATAALVAQNAGNLYLFVTRFADAM
VRMGAVRVLTGSDGQIRTSCRVVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1, 2 and 3), 1 EST. Cultivar="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTCCTAGTACTAGCTGCCGCGGTGCTGTGGCTATGCTGCGCCGGTCGGGACGCGCAGGCGCAGGCGCCAGCAACGCAGCTGCAGTTGGGGTTCTACGCGCAGTCTTGCCCCCAG
GCGGAGGTCATCGTGCGGGACGAGGTCGGCAGGGCCGTCTCCGGCGACCCCGGCCTCGCCGCCGGGCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAAGAGGTTTCTACTTTCTACT
CTTCCATTTCACCTTGAAATGCCAATGTCAATGCCAGTGCAACGCAGGCTTGTCTGTCTGTCTCAAAATGTCAGCGATGATAGATGTGCTACTGCTGATGATGTGCAGGGCTGCGACGCG
TCGGTGCTGCTGGACACGATTGCGGGCAACGGCAGCACGGCGGCGGAGAAGGACGCGGCGCCGAACAGGACGCTCCGTGGGTTCGAGGTGATCGACGGCGCCAAGAAGCGGCTGGAGAGC
GCGTGCGCCGGCACCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCAGAGACAGCGTCGTGCTGTGGTACGTGTACGCCCGTGACTCTCCATTAATCGCTGCAACGAACGAAGTCCCG
TAGTCTCTTTAATTTGCTTACGTATCGACAATGGCAGACCGGCGGCAGCCCGTACGGCGTGCCGGCGGGGCGGAGGGACGGCAACGAGTCGTCGGCGTCCGACGCGCAGGCCAGCCTGCC
ACCTCCCACCGCAAACGTGGCCCAGCTGACCCAAATCTTCGCCAGGAACGGGCTCTCCCAGGAGGACATGGTCACGCTCTCCGCGGTACCCTATAAAGCCCATATCATATAAAACGGCCC
AAAGCCCAACTAAACCAATCAGATTCTGAATCTTTTTTTTCCTTCTTTTTTTGCATTCAGGGGCGCACACGATCGGGGTGACGCACTGCAGCTCATTCAGCGCGCGGCTCTACTCGGGCG
ACAACAACAACAGCGATAACACGGGCCATGACCCGGCCATGGACGACGCCACGGCGACGGAGCTGGCCCGGCGGTGCCCGCCAGGGAGCGCCGACACGGTGCCCATGGACCTCGGCGGCG
GCGGCGGCCCAGTCGACGAGAACGCGTTCGACACGGGCTACTTCCAGGCGCTGCTGGCCCATCGCGGCCTGCTGGGCTCCGACCAGGCCCTCACGGCCGACAACGCCACCGCGGCTCTCG
TGGCCCAGAATGCCGGGAACCTGTATTTGTTTGTCACCAGGTTCGCCGACGCCATGGTCAGGATGGGCGCCGTCCGGGTGCTCACCGGCAGTGACGGCCAGATTCGCACCAGTTGCAGGG
TCGTAAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTCCTAGTACTAGCTGCCGCGGTGCTGTGGCTATGCTGCGCCGGTCGGGACGCGCAGGCGCAGGCGCCAGCAACGCAGCTGCAGTTGGGGTTCTACGCGCAGTCTTGCCCCCAG
GCGGAGGTCATCGTGCGGGACGAGGTCGGCAGGGCCGTCTCCGGCGACCCCGGCCTCGCCGCCGGGCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAAGGGCTGCGACGCGTCGGTG
CTGCTGGACACGATTGCGGGCAACGGCAGCACGGCGGCGGAGAAGGACGCGGCGCCGAACAGGACGCTCCGTGGGTTCGAGGTGATCGACGGCGCCAAGAAGCGGCTGGAGAGCGCGTGC
GCCGGCACCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCAGAGACAGCGTCGTGCTGACCGGCGGCAGCCCGTACGGCGTGCCGGCGGGGCGGAGGGACGGCAACGAGTCGTCGGCG
TCCGACGCGCAGGCCAGCCTGCCACCTCCCACCGCAAACGTGGCCCAGCTGACCCAAATCTTCGCCAGGAACGGGCTCTCCCAGGAGGACATGGTCACGCTCTCCGGGGCGCACACGATC
GGGGTGACGCACTGCAGCTCATTCAGCGCGCGGCTCTACTCGGGCGACAACAACAACAGCGATAACACGGGCCATGACCCGGCCATGGACGACGCCACGGCGACGGAGCTGGCCCGGCGG
TGCCCGCCAGGGAGCGCCGACACGGTGCCCATGGACCTCGGCGGCGGCGGCGGCCCAGTCGACGAGAACGCGTTCGACACGGGCTACTTCCAGGCGCTGCTGGCCCATCGCGGCCTGCTG
GGCTCCGACCAGGCCCTCACGGCCGACAACGCCACCGCGGCTCTCGTGGCCCAGAATGCCGGGAACCTGTATTTGTTTGTCACCAGGTTCGCCGACGCCATGGTCAGGATGGGCGCCGTC
CGGGTGCTCACCGGCAGTGACGGCCAGATTCGCACCAGTTGCAGGGTCGTAAACTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACCTTGTTA CTTCTTCTAC CTCTCAGGAT ATATTTCCTC TTCATGTAAA CTTGTCTTGC TCTGTCTTTG ATTCGTCTTG GTAAACACAG AAGCCATGGC GGTCCTAGTA CTAGCTGCCG  CGGTGCTGTG GCTATGCTGC GCCGGTCGGG ACGCGCAGGC GCAGGCGCCA GCAACGCAGC TGCAGTTGGG GTTCTACGCG CAGTCTTGCC CCCAGGCGGA GGTCATCGTG CGGGACGAGG  TCGGCAGGGC CGTCTCCGGC GACCCCGGCC TCGCCGCCGG GCTCCTCCGC CTCCACTTCC ACGACTGCTT CGTCAAGGGC TGCGACGCGT CGGTGCTGCT GGACACGATT GCGGGCAACG  GCAGCACGGC GGCGGAGAAG GACGCGGCGC CGAACAGGAC GCTCCGTGGG TTCGAGGTGA TCGACGGCGC CAAGAAGCGG CTGGAGAGCG CGTGCGCCGG CACCGTCTCC TGCGCCGACA  TCCTCGCCTT CGCCGCCAGA GACAGCGTCG TGCTGACCGG CGGCAGCCCG TACGGCGTGC CGGCGGGGCG GAGGGACGGC AACGAGTCGT CGGCGTCCGA CGCGCAGGCC AGCCTGCCAC  CTCCCACCGC AAACGTGGCC CAGCTGACCC AAATCTTCGC CAGGAACGGG CTCTCCCAGG AGGACATGGT CACGCTCTCC GGGGCGCACA CGATCGGGGT GACGCACTGC AGCTCATTCA  GCGCGCGGCT CTACTCGGGC GACAACAACA ACAGCGATAA CACGGGCCAT GACCCGGCCA TGGACGACGC CACGGCGACG GAGCTGGCCC GGCGGTGCCC GCCAGGGAGC GCCGACACGG  TGCCCATGGA CCTCGGCGGC GGCGGCGGCC CAGTCGACGA GAACGCGTTC GACACGGGCT ACTTCCAGGC GCTGCTGGCC CATCGCGGCC TGCTGGGCTC CGACCAGGCC CTCACGGCCG  ACAACGCCAC CGCGGCTCTC GTGGCCCAGA ATGCCGGGAA CCTGTATTTG TTTGTCACCA GGTTCGCCGA CGCCATGGTC AGGATGGGCG CCGTCCGGGT GCTCACCGGC AGTGACGGCC 
AGATTCGCAC CAGTTGCAGG GTCGTAAACT GATATAACAG CATACAGACA GTACCATTTT TTCTTTTTGC GAGTTATTTC TTTTTTGTTT CTATGTCTTT CAAAATG 

Retrieve as FASTA