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Entry information : BdiPrx50 (Bradi2g04490)
Entry ID 7849
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx50 (Bradi2g04490)
Name (synonym) BdiPrx50 (Bradi2g04490)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx50
start..stop		 S start..stop
TaPrx62-1A 613 0 1..326 1..326
TaPrx62-1D 613 0 1..326 1..326
TaPrx62-1B 612 0 1..326 1..326
OsPrx01 580 0 1..326 1..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7849' 'join(3154500..3154715,3154879..3155058,3155270..3155432,3155545..3155966)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3154500..3154715 214 N° 2 3154879..3155058 178 N° 3 3155270..3155432 161 N° 4 3155545..3155966 420
join(3154500..3154715,3154879..3155058,3155270..3155432,3155545..3155966)


exon

Literature and cross-references BdiPrx50 (Bradi2g04490)
DNA ref. Phytozome 12:   Bd2 (3154500..3155966)
EST ref. GenBank:   DV489065.1 [Fragment]
Protein sequence: BdiPrx50 (Bradi2g04490)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35019.63 (32451.2)  
PI (pH):   %s   7.31 (7.31) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTASEIAALFFLFSALLRSSLVLSQGLQRGFYDSNCPDAEDIVRS
TVKKYYNNDATIAPGLLRLHFHDCFVQGCDASVLISGASSERTAPQNFGLRGFEVIDDAKSQLEATCPGVVSCADILALAARDSVDLTGGPSWSVPLGRRDGRISSAADAKALPSPADPVSVQRQKFADQGLSDHDLVTLVGAHTIG
QTDCALFRYRLFNFTATGNADPTISPAFLPQLRALCPPNGDPSRRVALDKDSTGTFDASFFKNVRDGNAVLESDQRLWSDDATQGLVQKYAGNVRGLFGLRFAYDFPKAMVSMSSVAVKT
GRQGEIRRKCSRVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, introns 1, 2 and 3), 1 EST.
Cultivar="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAGCATCAGAAATAGCTGCTCTTTTCTTTCTATTCAGTGCTTTACTGAGAAGTTCTTTGGTCCTTAGCCAGGGACTGCAGAGAGGATTCTACGACTCCAACTGTCCTGATGCCGAG
GATATAGTGAGGTCTACTGTCAAAAAGTACTACAACAATGATGCCACCATTGCCCCAGGCTTGCTCAGGCTACACTTCCATGACTGTTTTGTCCAAAAGTTAGTTCTATAATTCGATTCT
CTGTACTACTTTGTGGTTTGGTACTCCTGACTTTCCTCTCGATCCCATGTTCTGTTGTCCTCATTTTACAATTGATGGCGAAGGACCCTGTGCAGTTTTGCTTTCCTGTCTGACATTTGT
TTCTTCTGCCATGCACTGTAGGGATGTGATGCTTCTGTTTTGATTTCTGGAGCATCATCTGAAAGGACTGCCCCACAGAATTTTGGTCTCAGGGGATTTGAAGTGATAGACGATGCCAAG
TCCCAGTTGGAGGCCACCTGCCCTGGGGTGGTATCTTGTGCTGATATATTGGCCCTCGCCGCTCGTGATTCGGTTGATCTGTGGTGAGTCACTCTGTAACTACGCAGGCCTTAATTATGT
CTCTCTAGCCATGTGCTGAATTCATGCTGATTAAGAACTGTTTACCTTTTGGTAGAGGGTCTGATGATTGAATTGCTGGCTTATGTAGTTATGTTATCGTTTACAGGGATAGCTTATGTT
ACTGTTGAGAGAAAAATAAAGGACTGATTGACTCACTTTTTTGTACCATGTAAGACTGGTGGGCCAAGCTGGTCAGTACCTCTGGGACGAAGAGACGGAAGAATTTCATCAGCAGCGGAT
GCCAAGGCCTTACCATCTCCCGCCGATCCTGTATCCGTTCAGCGGCAAAAGTTTGCCGATCAAGGCTTAAGTGACCACGATCTCGTAACGCTAGTCGCGGTATGGTCTTGACATCGACTT
GCATAATACATAGTCTTCAGTGAATTGTATCTCATTTTGCTGATAAATGCTGCAACAAGTTAACAAGTGACCTGGCAACACGGGCCTGTAGGTGCTCACACCATCGGGCAGACTGACTGT
GCGCTCTTCCGGTACCGCCTGTTCAACTTCACGGCGACGGGCAACGCGGACCCGACGATCAGCCCGGCGTTCCTGCCGCAGCTGCGGGCACTGTGCCCGCCCAACGGCGACCCCTCGCGG
CGGGTGGCGCTGGACAAGGACAGCACGGGCACGTTCGACGCGAGCTTCTTCAAGAACGTGAGGGACGGCAACGCCGTGCTGGAGTCGGACCAGAGGCTGTGGAGCGACGACGCCACGCAG
GGCCTCGTGCAGAAGTACGCCGGCAACGTCCGCGGCCTGTTCGGGCTCCGGTTCGCCTATGATTTCCCCAAGGCCATGGTGAGCATGAGCAGCGTCGCCGTGAAGACCGGCAGGCAGGGC
GAGATAAGGAGGAAGTGCTCCAGGGTTAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAGCATCAGAAATAGCTGCTCTTTTCTTTCTATTCAGTGCTTTACTGAGAAGTTCTTTGGTCCTTAGCCAGGGACTGCAGAGAGGATTCTACGACTCCAACTGTCCTGATGCCGAG
GATATAGTGAGGTCTACTGTCAAAAAGTACTACAACAATGATGCCACCATTGCCCCAGGCTTGCTCAGGCTACACTTCCATGACTGTTTTGTCCAAGGATGTGATGCTTCTGTTTTGATT
TCTGGAGCATCATCTGAAAGGACTGCCCCACAGAATTTTGGTCTCAGGGGATTTGAAGTGATAGACGATGCCAAGTCCCAGTTGGAGGCCACCTGCCCTGGGGTGGTATCTTGTGCTGAT
ATATTGGCCCTCGCCGCTCGTGATTCGGTTGATCTGACTGGTGGGCCAAGCTGGTCAGTACCTCTGGGACGAAGAGACGGAAGAATTTCATCAGCAGCGGATGCCAAGGCCTTACCATCT
CCCGCCGATCCTGTATCCGTTCAGCGGCAAAAGTTTGCCGATCAAGGCTTAAGTGACCACGATCTCGTAACGCTAGTCGGTGCTCACACCATCGGGCAGACTGACTGTGCGCTCTTCCGG
TACCGCCTGTTCAACTTCACGGCGACGGGCAACGCGGACCCGACGATCAGCCCGGCGTTCCTGCCGCAGCTGCGGGCACTGTGCCCGCCCAACGGCGACCCCTCGCGGCGGGTGGCGCTG
GACAAGGACAGCACGGGCACGTTCGACGCGAGCTTCTTCAAGAACGTGAGGGACGGCAACGCCGTGCTGGAGTCGGACCAGAGGCTGTGGAGCGACGACGCCACGCAGGGCCTCGTGCAG
AAGTACGCCGGCAACGTCCGCGGCCTGTTCGGGCTCCGGTTCGCCTATGATTTCCCCAAGGCCATGGTGAGCATGAGCAGCGTCGCCGTGAAGACCGGCAGGCAGGGCGAGATAAGGAGG
AAGTGCTCCAGGGTTAACTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAGCAT CAGAAATAGC TGCTCTTTTC TTTCTATTCA GTGCTTTACT GAGAAGTTCT TTGGTCCTTA GCCAGGGACT GCAGAGAGGA TTCTACGACT CCAACTGTCC TGATGCCGAG  GATATAGTGA GGTCTACTGT CAAAAAGTAC TACAACAATG ATGCCACCAT TGCCCCAGGC TTGCTCAGGC TACACTTCCA TGACTGTTTT GTCCAAGGAT GTGATGCTTC TGTTTTGATT  TCTGGAGCAT CATCTGAAAG GACTGCCCCA CAGAATTTTG GTCTCAGGGG ATTTGAAGTG ATAGACGATG CCAAGTCCCA GTTGGAGGCC ACCTGCCCTG GGGTGGTATC TTGTGCTGAT  ATATTGGCCC TCGCCGCTCG TGATTCGGTT GATCTGACTG GTGGGCCAAG CTGGTCAGTA CCTCTGGGAC GAAGAGACGG AAGAATTTCA TCAGCAGCGG ATGCCAAGGC CTTACCATCT  CCCGCCGATC CTGTATCCGT TCAGCGGCAA AAGTTTGCCG ATCAAGGCTT AAGTGACCAC GATCTCGTAA CGCTAGTCGG TGCTCACACC ATCGGGCAGA CTGACTGTGC GCTCTTCCGG  TACCGCCTGT TCAACTTCAC GGCGACGGGC AACGCGGACC CGACGATCAG CCCGGCGTTC CTGCCGCAGC TGCGGGCACT GTGCCCGCCC AACGGCGACC CCTCGCGGCG GGTGGCGCTG  GACAAGGACA GCACGGGCAC GTTCGACGCG AGCTTCTTCA AGAACGTGAG GGACGGCAAC GCCGTGCTGG AGTCGGACCA GAGGCTGTGG AGCGACGACG CCACGCAGGG CCTCGTGCAG  AAGTACGCCG GCAACGTCCG CGGCCTGTTC GGGCTCCGGT TCGCCTATGA TTTCCCCAAG GCCATGGTGA GCATGAGCAG CGTCGCCGTG AAGACCGGCA GGCAGGGCGA GATAAGGAGG  AAGTGCTCCA GGGTTAACTG ATGTCTGATG ATTAGGAGGG GGGAGGGGGT CGATACTTGT AGCCTGGCTT GGTAAAAAAA AAAAGCATCC CGTATCATAC AGTACCACTT CCTTATTTTC 
TTTGTGTCAA GGCTGTTATT CCAGAATCGA GTGCTTAAGA TG 

Retrieve as FASTA