Entry information : BdiPrx92 (Bradi2g46050)
Entry ID 7870
Creation 2011-01-14 (Toky Ramarohetra)
Last sequence changes 2011-01-14 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx92 (Bradi2g46050)
Name (synonym) BdiPrx92 (Bradi2g46050)
Class Class III peroxidase    [Orthogroup: Prx025]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx92
start..stop
S start..stop
TaPrx234-1B 603 0 1..367 3..357
TaPrx234-1D 600 0 1..367 3..357
SbPrx66 578 0 26..367 33..367
HvPrx25 569 0 1..351 3..343
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7870' 'join(46479307..46479612,46479782..46480003,46481892..46482467)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46479307..46479612 304 N° 2 46479782..46480003 220 N° 3 46481892..46482467 574  
join(46479307..46479612,46479782..46480003,46481892..46482467)


exon

Literature and cross-references BdiPrx92 (Bradi2g46050)
DNA ref. Phytozome 12:   Bd2 (46479307..46482467)
Protein sequence: BdiPrx92 (Bradi2g46050)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   367 (340)
PWM (Da):   %s   39192.33 (36387.9)  
PI (pH):   %s   10.1 (9.99) Peptide Signal:   %s   cut: 28 range:28-367
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDSSTGIRFVLLLVVSLGGNGMRACRAREAPLPLPLPSAAPATTA
GSSRRAPERHGLSLDFYAKTCPAVDQIVANVTAARFRDHPAAGPAVLRLFHHDCFVE
GCDASILIAPTAAKAGDAAARAPKVERDMEENKNLPQYGFDTVEMAKAAVESKCPGVVTCADVLALAARDFVQLAGGPYYAVKKGRKDSKVSLAGKVRGSLPRANSTVDDLLRVFASKGL
GLNDLVALSGAHTIGFAHCAHFLGRLYDFRGTRQPDPLMDARLVKALRMACPSTGGSARVVVPFDVSTPFQFDHAYYANLQARLGLLGSDQALFLDPRTRPIVQSLGADRARFFQAFVAS
MDRMGSIRVKKGRKGEVRRICSQHL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, introns 1 and 2), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCCTCCACTGGGATCCGCTTTGTCTTGCTCCTCGTCGTGTCCCTCGGCGGCAATGGCATGCGCGCTTGCCGCGCTCGGGAGGCGCCCTTGCCATTGCCATTGCCGTCGGCCGCT
CCCGCTACTACTGCAGGAAGCAGCAGGAGGGCGCCGGAGCGGCACGGGCTGTCGCTGGACTTCTACGCCAAGACGTGCCCCGCGGTCGACCAGATCGTCGCCAACGTCACCGCCGCGCGG
TTCCGCGATCACCCGGCCGCAGGCCCCGCCGTGCTCCGCCTCTTCCACCACGACTGCTTCGTGGAA
AAGTACGTAAGCAAATTAGTCAATCTTAGCACGCACGCACATTGCACGATTCTG
TTACCTGCACCCACAATCTCGGTCACTTTCTTAACGAACGGTCAATTTTTCCTTTCCGTGGCATGCACATTGTTGGTAGTTGGTACCGATGTCTGATCGAACCGAACGAACGTACAGGGG
TGCGACGCGTCCATACTGATCGCGCCGACGGCGGCCAAGGCCGGCGACGCGGCGGCACGGGCGCCGAAGGTGGAGAGGGACATGGAGGAGAACAAGAACCTGCCGCAGTACGGGTTCGAC
ACGGTGGAGATGGCCAAGGCCGCCGTGGAGAGCAAGTGCCCCGGCGTCGTCACCTGCGCCGACGTCCTCGCCCTCGCCGCACGAGACTTCGTGCAACTG
TGGTACGCTACGCATGCCTGT
ACCGGTTAACCGCTCCCGCCATTATATCTCCTTCTTTTTTTCTCGGAAAAAGGCTGTTCCATTCATGCGACAATGCGCGCGCGGGGCAAGCCTGACCGACCACAAAGCCATTGTTCAAGT
ACAGTGCGACTCCTATTACGCAACGCAACCCAGCCAGCAGACTGGCAATTAACGACGGGTTTCAGCGTGCGTAAATAGGAAAAAGCGATGCGAGTACGCGGCATTGCAAGTTTTGCAACT
CCCAAGTCCCAACCGCCCCAAAGGAGGACCAGAGCGAGACTTGACCGGGGCAAAAAGTTTATCTGCTTTGCTTTTAACTTTTGCATGGGGATAAAGGCGCGCGCACCCGGTCCGGCCGCC
ATGCCCGCCCGTGCCGATGGGCGGCATGTGACGCCGTGCGAACGGCGTCAGGAGCAAGGCGCATGCTCAGATTACCATGCGTAGCTTAGCCAAGTGCAACAGGATTATCTTTGCCAAGTA
CGGGCCGAGCCGGTAAAACAAATGAGACCTGCTCTGTTTTTTTGTTTCCCCCGTGCTGGTGTAAGTGAGAGTAGGTTCTGGATTACGGAGTCACTCGGCTTCAAAAGGAAAAAAAAGAAC
CTTGCAAATCAGAATGATCGAGTGGATTGTTTGGGTGATGGGCCCGTTCTAGCTAGGTAGATAAAGCCGATAGCTTGGAGATTCGGTAGTCTCTTGGATCTTATCGTCACAGGACAGCAA
ATTAAGATAGGCTCGAATCGTGTCAAAACCAACAGATTTGGTGCTAGCGATAGATATAGGTGCACACTGATTTTCTCCGTCTGTCCCTGACATCCGTCGCTGCTTGTAAGCTAGCTAACC
GAACACAGCAAGCTGTCTTGAGTAGCTAGGCGCCTCTGAGGCTCTCTGAGCAAGTCAATTGTCCCGTTCTTCTTCCATGGTTCTTTTTCTCTCCCACTATCATAAATCAAGCGTGATGCC
TTGGCTCTTGCATTGTCGTGTACTCGTGTAGCAGGGCCCTCTTCTTTTCTGGACCAGTATTGCGTAGGCCAAAAACTCACAACTCGAAAGGTAGTAATAAATCATAACGCATCGGCTCAT
CATTTTTCTCGAGCGTAACGTACATATTCCTAGGAAACAATTTGTGTGCTGGCATGACCAACTTATGTAATATTCATCTTTCCATGAATATGTCAATTATCAAGATGTTGGTAGGCCAGC
TAAAAAAAGATGTTGGTAGGCCAGAAGTTGCAGCGATGTTTCAGCAGGCCCACAGACACTAGGCCGCGTGTGGCTTTAGGCTTGGATAAGAAAAGCCCATCTACGTTAGGTCAGTCCTGC
CTAAAGTCCATGCTATATATGTGGGGTACAAATTGGTGGAAAATACTCCCTCCATTTCACAAAGAATGTCATGCACACATTTCAAAATTTTACTTTGACCAACAATTAGACTAATGATTT
AAGACTTATGTGTTACAAAAATTATATCATTAGATTCGTATTTTAAAAACCTTTCCAACGATATAAAATTTGTAACATATAATCTACATACAATTGGTCTAATCGTTGATCAAAGTTCGA
CCTCGAAAAGCGTTGGCGCCACTCTTTGTGAAATGGAGGGAGTATCTCATGCAGAAAAAAAAAAGTTTCTTACTAGCAGTGATAACGAATTCTTTTGCCAGTTAAATGACCCAGGATCAT
GGTTTGCTTTAGGCTTGGATAAGAAAAGCCCATCTACGTTAGGTCAGTCCTACCTAAAGTCCATGCTATATATGTGGGCTACAAATTGGTGAAAAGTATCTCATACAGAAAAAAAAAAGT
TCTTACTAGTAGTGATAACGAATTCTTTTGCCAGTTAAATGACCCAGGATCATGGTTTGCTTCATGCAGGCAGGTGGGCCCTACTACGCGGTGAAGAAGGGTCGGAAAGACAGCAAGGTG
TCCCTGGCGGGCAAGGTGCGCGGCAGCCTCCCACGCGCCAACTCGACCGTGGACGATCTCCTCCGCGTGTTCGCCTCCAAGGGCCTGGGCCTGAACGACCTGGTGGCGCTCTCCGGCGCG
CACACCATCGGCTTCGCGCACTGCGCCCACTTCCTGGGCCGCCTCTACGACTTCCGCGGCACGCGGCAGCCGGACCCGCTCATGGACGCCCGCCTCGTGAAGGCGCTGCGCATGGCGTGC
CCTTCCACCGGCGGCAGCGCCCGCGTCGTGGTGCCCTTCGACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCTAACCTGCAGGCCAGGCTGGGCCTCCTGGGCTCCGACCAG
GCGCTCTTCCTGGACCCGCGCACCAGGCCCATCGTGCAGAGCCTCGGCGCCGACAGGGCCCGCTTCTTCCAGGCCTTTGTTGCCAGCATGGACAGGATGGGCTCCATCCGCGTCAAGAAA
GGCAGGAAGGGGGAGGTCAGGAGGATCTGCAGCCAGCATCTGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCCTCCACTGGGATCCGCTTTGTCTTGCTCCTCGTCGTGTCCCTCGGCGGCAATGGCATGCGCGCTTGCCGCGCTCGGGAGGCGCCCTTGCCATTGCCATTGCCGTCGGCCGCT
CCCGCTACTACTGCAGGAAGCAGCAGGAGGGCGCCGGAGCGGCACGGGCTGTCGCTGGACTTCTACGCCAAGACGTGCCCCGCGGTCGACCAGATCGTCGCCAACGTCACCGCCGCGCGG
TTCCGCGATCACCCGGCCGCAGGCCCCGCCGTGCTCCGCCTCTTCCACCACGACTGCTTCGTGGAA
GGGTGCGACGCGTCCATACTGATCGCGCCGACGGCGGCCAAGGCCGGCGACGCG
GCGGCACGGGCGCCGAAGGTGGAGAGGGACATGGAGGAGAACAAGAACCTGCCGCAGTACGGGTTCGACACGGTGGAGATGGCCAAGGCCGCCGTGGAGAGCAAGTGCCCCGGCGTCGTC
ACCTGCGCCGACGTCCTCGCCCTCGCCGCACGAGACTTCGTGCAACTG
GCAGGTGGGCCCTACTACGCGGTGAAGAAGGGTCGGAAAGACAGCAAGGTGTCCCTGGCGGGCAAGGTGCGC
GGCAGCCTCCCACGCGCCAACTCGACCGTGGACGATCTCCTCCGCGTGTTCGCCTCCAAGGGCCTGGGCCTGAACGACCTGGTGGCGCTCTCCGGCGCGCACACCATCGGCTTCGCGCAC
TGCGCCCACTTCCTGGGCCGCCTCTACGACTTCCGCGGCACGCGGCAGCCGGACCCGCTCATGGACGCCCGCCTCGTGAAGGCGCTGCGCATGGCGTGCCCTTCCACCGGCGGCAGCGCC
CGCGTCGTGGTGCCCTTCGACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCTAACCTGCAGGCCAGGCTGGGCCTCCTGGGCTCCGACCAGGCGCTCTTCCTGGACCCGCGC
ACCAGGCCCATCGTGCAGAGCCTCGGCGCCGACAGGGCCCGCTTCTTCCAGGCCTTTGTTGCCAGCATGGACAGGATGGGCTCCATCCGCGTCAAGAAAGGCAGGAAGGGGGAGGTCAGG
AGGATCTGCAGCCAGCATCTGTAG

Retrieve as FASTA