Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
334 (309) |
PWM (Da): |
35938.93 (33615.7) |
Transmb domain: |
i7-29o |
PI (pH): |
6.98 (6.94) |
Peptide Signal: |
cut: 26 range:26-334 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MALHWSSGLAALAVAVSLFAAGAAGHPFLVPQFYEHTCPQMQAVV GGIVAKEHAKDPRMAASLVRLHFHDCFVQGCDASVLLDDAHGRFTTEKRSNPNRDSLRGYEVIDEIKAALEHACP GTVSCADIVAVAARDSTVLTGGPGWEVPLGRRDSLTASLSG SNNLIPAPNDTLPTIAAKFHNQGLDIVDLVALSGAHTIGDSRCVSFRQRLYNQNNDGRPDPTLNPAYAAELRGRCPKSGGDQTLFALDPATQFRFDNQYYKNILAMNGLLNSDEVLLTQSHETME LVKSYAASNALFFEHFARSMVKMGNISPLTGHSGEIRKNCRRISTTSN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 5, intron 3), 1 EST. Cultivar="Bd21". |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCACTGCACTGGAGCAGCGGCCTGGCGGCGCTCGCTGTCGCCGTGTCGCTCTTCGCGGCGGGCGCCGCGGGCCACCCGTTCCTGGTGCCGCAGTTCTACGAGCACACGTGCCCGCAG ATGCAGGCGGTGGTGGGCGGCATCGTGGCCAAGGAGCACGCCAAGGACCCGCGCATGGCGGCGTCCCTGGTCCGGCTGCACTTCCACGACTGCTTCGTGCAGGGCTGCGACGCGTCCGTG CTGCTGGACGACGCCCACGGCAGGTTCACCACCGAGAAGCGGTCCAACCCGAACCGCGACTCGCTGCGAGGGTACGAGGTCATCGACGAGATCAAGGCCGCGCTCGAGCACGCCTGCCCC GGCACCGTCTCCTGCGCCGACATCGTCGCCGTCGCCGCCAGGGACTCCACCGTGCTGACTGGTGGGCCCGGCTGGGAGGTGCCGCTGGGGAGGAGGGACTCGCTCACCGCCAGCCTGAGC GGCTCCAACAACCTCATCCCTGCCCCCAACGACACCCTCCCCACCATCGCCGCCAAGTTCCACAACCAGGGGCTCGACATCGTCGACCTCGTCGCCCTCTCAGAGGTATATACATGCCAT TGCACATGAACAGAATGGTCACAGGAATTACTCTCTTCGATCCATATTACTCGTGTATCTAGACAAAACTGCGACCAGTAGAGTTACAAGTTACGTAACGAATTAATGGACGGCGTTTCG GGCATGCAGGGGCGCACACGATCGGCGACTCGCGGTGCGTGAGCTTCAGGCAGCGGCTGTACAACCAGAACAACGACGGGCGGCCGGACCCGACGCTAAACCCGGCGTACGCGGCGGAGC TCCGCGGGCGGTGCCCCAAGTCCGGCGGCGACCAGACCCTGTTCGCGCTCGACCCGGCAACCCAGTTCCGGTTCGACAACCAGTACTACAAGAACATCCTGGCCATGAACGGCCTGCTCA ACTCCGACGAGGTGTTGCTCACGCAGAGCCACGAGACCATGGAGCTCGTCAAGAGCTACGCCGCCAGCAACGCGCTCTTCTTCGAGCACTTCGCCAGGTCCATGGTCAAGATGGGCAACA TCTCGCCCCTCACCGGGCACAGCGGCGAGATCAGGAAGAACTGCAGGAGGATATCAACCACTTCTAATTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCACTGCACTGGAGCAGCGGCCTGGCGGCGCTCGCTGTCGCCGTGTCGCTCTTCGCGGCGGGCGCCGCGGGCCACCCGTTCCTGGTGCCGCAGTTCTACGAGCACACGTGCCCGCAG ATGCAGGCGGTGGTGGGCGGCATCGTGGCCAAGGAGCACGCCAAGGACCCGCGCATGGCGGCGTCCCTGGTCCGGCTGCACTTCCACGACTGCTTCGTGCAGGGCTGCGACGCGTCCGTG CTGCTGGACGACGCCCACGGCAGGTTCACCACCGAGAAGCGGTCCAACCCGAACCGCGACTCGCTGCGAGGGTACGAGGTCATCGACGAGATCAAGGCCGCGCTCGAGCACGCCTGCCCC GGCACCGTCTCCTGCGCCGACATCGTCGCCGTCGCCGCCAGGGACTCCACCGTGCTGACTGGTGGGCCCGGCTGGGAGGTGCCGCTGGGGAGGAGGGACTCGCTCACCGCCAGCCTGAGC GGCTCCAACAACCTCATCCCTGCCCCCAACGACACCCTCCCCACCATCGCCGCCAAGTTCCACAACCAGGGGCTCGACATCGTCGACCTCGTCGCCCTCTCAGGGGCGCACACGATCGGC GACTCGCGGTGCGTGAGCTTCAGGCAGCGGCTGTACAACCAGAACAACGACGGGCGGCCGGACCCGACGCTAAACCCGGCGTACGCGGCGGAGCTCCGCGGGCGGTGCCCCAAGTCCGGC GGCGACCAGACCCTGTTCGCGCTCGACCCGGCAACCCAGTTCCGGTTCGACAACCAGTACTACAAGAACATCCTGGCCATGAACGGCCTGCTCAACTCCGACGAGGTGTTGCTCACGCAG AGCCACGAGACCATGGAGCTCGTCAAGAGCTACGCCGCCAGCAACGCGCTCTTCTTCGAGCACTTCGCCAGGTCCATGGTCAAGATGGGCAACATCTCGCCCCTCACCGGGCACAGCGGC GAGATCAGGAAGAACTGCAGGAGGATATCAACCACTTCTAATTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CATCCATCAT CTCTAGCGCG ATTGACCCAG CTCGCCATTA GGAGATGGCA CTGCACTGGA GCAGCGGCCT GGCGGCGCTC GCTGTCGCCG TGTCGCTCTT CGCGGCGGGC GCCGCGGGCC
ACCCGTTCCT GGTGCCGCAG TTCTACGAGC ACACGTGCCC GCAGATGCAG GCGGTGGTGG GCGGCATCGT GGCCAAGGAG CACGCCAAGG ACCCGCGCAT GGCGGCGTCC CTGGTCCGGC
TGCACTTCCA CGACTGCTTC GTGCAGGGCT GCGACGCGTC CGTGCTGCTG GACGACGCCC ACGGCAGGTT CACCACCGAG AAGCGGTCCA ACCCGAACCG CGACTCGCTG CGAGGGTACG
AGGTCATCGA CGAGATCAAG GCCGCGCTCG AGCACGCCTG CCCCGGCACC GTCTCCTGCG CCGACATCGT CGCCGTCGCC GCCAGGGACT CCACCGTGCT GACTGGTGGG CCCGGCTGGG
AGGTGCCGCT GGGGAGGAGG GACTCGCTCA CCGCCAGCCT GAGCGGCTCC AACAACCTCA TCCCTGCCCC CAACGACACC CTCCCCACCA TCGCCGCCAA GTTCCACAAC CAGGGGCTCG
ACATCGTCGA CCTCGTCGCC CTCTCAGGGG CGCACACGAT CGGCGACTCG CGGTGCGTGA GCTTCAGGCA GCGGCTGTAC AACCAGAACA ACGACGGGCG GCCGGACCCG ACGCTAAACC
CGGCGTACGC GGCGGAGCTC CGCGGGCGGT GCCCCAAGTC CGGCGGCGAC CAGACCCTGT TCGCGCTCGA CCCGGCAACC CAGTTCCGGT TCGACAACCA GTACTACAAG AACATCCTGG
CCATGAACGG CCTGCTCAAC TCCGACGAGG TGTTGCTCAC GCAGAGCCAC GAGACCATGG AGCTCGTCAA GAGCTACGCC GCCAGCAACG CGCTCTTCTT CGAGCACTTC GCCAGGTCCA
TGGTCAAGAT GGGCAACATC TCGCCCCTCA CCGGGCACAG CGGCGAGATC AGGAAGAACT GCAGGAGGAT ATCAACCACT TCTAATTAAA CAGTGGTCCT CTTTTGATTT CGGAATTCCT
TTTGATTTGC GTGTTTCCTT CAAGTATGTA TGCGTGTGAT TACTTGCATT TTGGTATTCG GGGTCATGCA CCGTAAATGG TTGCGGTCGT TTTTTCTTCC CTCTTGTAAT TGTTCATATT
TCATCTTTGC TGTCAATAAA GTGCTTATCG GATGTTCCTG TCA
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Retrieve as FASTA
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