Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
324 (304) |
PWM (Da): |
34224.35 (32315.3) |
Transmb domain: |
i7-29o |
PI (pH): |
5.4 (5.40) |
Peptide Signal: |
cut: 21 range:21-324 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATAMVAAVL LLLTISPAAA AALSPHFHAD SCPELESIVR TSVEAALEEE IALAAGLLRV FFHDCFPQGC DGSVFLTGRN SEQSLGPNLT LQPRALQLVD AIRAKAHAAC GPTVSCADIS
ALATRDAVVF SGGPNYTVPL GNLDSLTPAS AKAVMTLPSP ITSSVAALFE AFRTRGLVEL TDLVALSGVH TVGRAGCRFF ADRSAKQDDT FSKKLAANCS VEPDRLQNLD VITPDVFDNG
YFKALMFNQG VFTSDMALVK DKDTAPIVKR FAGSKDKFFK QFVKSMEKLV NAPRPDGNVG EIRRSCSSPN GDDGEKEDFA VASA
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 5, no intron), no EST. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC
ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC
TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC
GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG
ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC
GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG
TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG
CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC
GTGGCTTCTG CTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC
ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC
TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC
GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG
ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC
GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG
TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG
CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC
GTGGCTTCTG CTTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC
ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC
TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC
GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG
ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC
GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG
TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG
CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC
GTGGCTTCTG CTTGAATGCT TGGTTGATAG TTTGTCACTT GATTTGTGTG CGTGTAACGG CCGTGCGTTA GCGTGCAAGG CTGGCTAGCT ATGATCGACA GTTGAGTGTG TCGGCCGTGT
TCTGTTTC
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Retrieve as FASTA
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