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Entry information : BdiPrx20 (Bradi1g32870)
Entry ID 7907
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-12-22 (Christophe Dunand)
Peroxidase information: BdiPrx20 (Bradi1g32870)
Name (synonym) BdiPrx20 (Bradi1g32870)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx20
start..stop		 S start..stop
TaPrx18-1D 539 0 22..337 18..331
TaPrx18-1B 539 0 31..337 25..330
TaPrx18-1A 537 0 30..337 25..330
TaPrx101-1A 527 0 30..337 25..331
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28373164..28373394 229 N° 2 28373499..28373859 359 N° 3 28375072..28375496 423  
join(28373164..28373394,28373499..28373859,28375072..28375496)


exon

Literature and cross-references BdiPrx20 (Bradi1g32870)
DNA ref. Phytozome 12:   Bd1 (28373164..28375496)
Protein sequence: BdiPrx20 (Bradi1g32870)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (315)
PWM (Da):   %s   35946.51 (33793.3) Transmb domain:   %s   i7-24o
PI (pH):   %s   9.31 (9.11) Peptide Signal:   %s   cut: 24 range:24-338
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAARSAMLTLLLSAILAVGGAAAAKAESSGKLRQGFYSHSCPRAE
QLVARYARRHVPRSPSLAATLLRTHFHDCFVRGCDASVLLNGRKKNNGEAEKEAAPNLTLRGFAFLDGAKALVEEECPGVVSCADVLALAARDAVAAIGGPFWKVPTGRRDGRVSRKQEALDQIPAPTMNFTALLASFRSKGLELPDLVWLSGAHTIGIAHCDSFGERLYNFTGRGGAGDADPSLDTAYAATLRRTKCATPTDNTTIVEMDPGSFLTFDLGYYRGLLKRRGLFQSDAALITDAAARADVESVAKGPPEVFFQVFARSMVRLG
MVGVKTGAQGEIRRHCAVVNG

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 2 introns), no ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCACGATCTGCGATGCTGACGCTCCTGTTATCCGCAATTTTGGCCGTCGGCGGCGCTGCAGCGGCGAAGGCGGAGAGTTCAGGCAAGCTGCGGCAGGGGTTCTACTCCCACAGC
TGCCCGCGGGCCGAGCAGCTCGTGGCGCGCTACGCCCGCCGCCACGTCCCCCGCTCCCCTTCCCTCGCTGCCACCCTCCTCCGCACCCACTTCCACGACTGCTTCGTTAGGGGGTAAGCA
AAGAAAGCAAACATCTTCCATGGCTCCGGCCATGACGATCGCCATGAATTCCCACAATGCAATGCTAAACCCGGCTCTGTTTACTCTGTTTTTTCAGGGGTGCGACGCGTCGGTGCTGCT
GAACGGGAGGAAGAAGAATAATGGGGAAGCGGAGAAGGAGGCGGCGCCGAACCTGACGCTGCGCGGGTTCGCGTTCCTGGACGGGGCCAAGGCGCTGGTGGAGGAGGAGTGCCCGGGGGT
CGTGTCCTGCGCCGACGTGCTGGCACTCGCCGCGCGCGACGCCGTGGCCGCCATCGGTGGGCCGTTCTGGAAGGTGCCGACGGGGAGGAGGGACGGGAGGGTGTCGCGGAAGCAGGAGGC
GCTCGACCAGATCCCGGCCCCCACCATGAACTTCACCGCGCTCCTCGCGTCGTTCCGGAGCAAAGGGCTCGAGCTCCCCGACCTCGTCTGGCTGTCAGAGGTGACACAACAAAATTAACA
GTTTTTCACAACGCAAGAGTAGTGATTAGTACCAAATACCGATGCGAAGAGTAAGTTGATTAGTTAGTTAGTGTACGTGGCAGAAATGCAGCCTCAAATCGTTGTTTTTTCCTTGTCGAG
TTCATTGGCACCGACACTCAGTTGAGTGAGTGAGACCACTAGATGACTAGATAGCTCTCGTGAGCTGCTCCTTTTTTTTTTCTGTCGAGCTAGCGGCAACTAAGCCGGCAGCTACCACGC
GATCCTACTACTACCCACTCCACTCAGAGTCACATGACTATATACTCTGTATTGCTCTGTTGCTGAAATGATGGCTCCGAGATAAAAAGAGGTATGACAGAGAAGAAAAGGGAGCTTAAA
GCTTGCCATGCGTGTGTCAAACAAAGGTCTCGGTAGAATTCTAGAACTGAATGCACGCGGACGTTCTCCCTCCACTCTCTAGAAATCCAGAACAGTTACTCCAACCAACAAGGAGGCTTT
TTAATTGGACAATCATGAGTCTGTTCAGTGTTCACTTCAATGCCATCGTAGCACAGAGGCACCGCTGCACAGATTTTATGTTCTGCTCTTTGGAAAAAATAGTATCACCGCATAGATGTA
GATACAGACACGCTAACCAGTGTCTTTAACTTGTCGAATAACCGCAACAAAATGGGTCCAAAAAGAGCAGGGAGTTAACGACAGACAAACTAATTAAGGGCGGAAGTACAGAGTATATAT
GAACTGTCAAGGACTTCTTGAACTGCTTGTCAAGTTCTCGATCCTACCAGCTTAGGTCACGAGAGATTCACATGTTTTAATATGAGTACAGGGCAATCAGTTGTGATGTAGACCTGCATG
CTACTGCTGTCTGCTAACCACACTGGTCTATTAATTCCTACCTGTTTAGATTGATGGTACCAGAAAAAAAGACACAAATGTCATGCATACTCTGAAGCAGGATAATGTTAGTATGTTGCT
CCACAATCTAAGCCTCCTTGCTAATGGGGCAATTCTACACGTACACCATTGCATAGTAGTATTACTGAACTTACTGCATTTACATGGTTCAGATTTCAGCAACCAACCGCTGACTCGCAC
AATCGCAGATCAGAAGCGCTGAAAATACATTTGAACTACTGAACTGGAATGTTTTACTGAACTTTCTGAATTTTGCATCTGTGACCTGGCAACCTGATCATCAACTCACCAGGCGCGCAC
ACGATCGGCATCGCGCACTGCGACTCCTTCGGCGAGCGGCTCTACAACTTCACGGGCCGCGGCGGCGCCGGCGACGCGGACCCGTCGCTGGACACCGCCTACGCCGCGACCCTCCGCCGC
ACAAAGTGCGCGACGCCGACGGACAACACGACGATCGTGGAGATGGACCCGGGAAGCTTCCTGACCTTCGACCTGGGCTACTACCGGGGCCTCCTCAAGCGCCGGGGCCTGTTCCAGTCG
GACGCGGCCCTGATCACGGACGCCGCGGCAAGGGCCGACGTCGAGAGCGTGGCCAAAGGGCCCCCCGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGTGAGGCTGGGCATGGTGGGC
GTCAAGACCGGCGCCCAGGGGGAGATCCGGCGCCACTGCGCCGTCGTCAACGGCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCACGATCTGCGATGCTGACGCTCCTGTTATCCGCAATTTTGGCCGTCGGCGGCGCTGCAGCGGCGAAGGCGGAGAGTTCAGGCAAGCTGCGGCAGGGGTTCTACTCCCACAGC
TGCCCGCGGGCCGAGCAGCTCGTGGCGCGCTACGCCCGCCGCCACGTCCCCCGCTCCCCTTCCCTCGCTGCCACCCTCCTCCGCACCCACTTCCACGACTGCTTCGTTAGGGGGTGCGAC
GCGTCGGTGCTGCTGAACGGGAGGAAGAAGAATAATGGGGAAGCGGAGAAGGAGGCGGCGCCGAACCTGACGCTGCGCGGGTTCGCGTTCCTGGACGGGGCCAAGGCGCTGGTGGAGGAG
GAGTGCCCGGGGGTCGTGTCCTGCGCCGACGTGCTGGCACTCGCCGCGCGCGACGCCGTGGCCGCCATCGGTGGGCCGTTCTGGAAGGTGCCGACGGGGAGGAGGGACGGGAGGGTGTCG
CGGAAGCAGGAGGCGCTCGACCAGATCCCGGCCCCCACCATGAACTTCACCGCGCTCCTCGCGTCGTTCCGGAGCAAAGGGCTCGAGCTCCCCGACCTCGTCTGGCTGTCAGGCGCGCAC
ACGATCGGCATCGCGCACTGCGACTCCTTCGGCGAGCGGCTCTACAACTTCACGGGCCGCGGCGGCGCCGGCGACGCGGACCCGTCGCTGGACACCGCCTACGCCGCGACCCTCCGCCGC
ACAAAGTGCGCGACGCCGACGGACAACACGACGATCGTGGAGATGGACCCGGGAAGCTTCCTGACCTTCGACCTGGGCTACTACCGGGGCCTCCTCAAGCGCCGGGGCCTGTTCCAGTCG
GACGCGGCCCTGATCACGGACGCCGCGGCAAGGGCCGACGTCGAGAGCGTGGCCAAAGGGCCCCCCGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGTGAGGCTGGGCATGGTGGGC
GTCAAGACCGGCGCCCAGGGGGAGATCCGGCGCCACTGCGCCGTCGTCAACGGCTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAC GATCTGCGAT GCTGACGCTC CTGTTATCCG CAATTTTGGC CGTCGGCGGC GCTGCAGCGG CGAAGGCGGA GAGTTCAGGC AAGCTGCGGC AGGGGTTCTA CTCCCACAGC  TGCCCGCGGG CCGAGCAGCT CGTGGCGCGC TACGCCCGCC GCCACGTCCC CCGCTCCCCT TCCCTCGCTG CCACCCTCCT CCGCACCCAC TTCCACGACT GCTTCGTTAG GGGGTGCGAC  GCGTCGGTGC TGCTGAACGG GAGGAAGAAG AATAATGGGG AAGCGGAGAA GGAGGCGGCG CCGAACCTGA CGCTGCGCGG GTTCGCGTTC CTGGACGGGG CCAAGGCGCT GGTGGAGGAG  GAGTGCCCGG GGGTCGTGTC CTGCGCCGAC GTGCTGGCAC TCGCCGCGCG CGACGCCGTG GCCGCCATCG GTGGGCCGTT CTGGAAGGTG CCGACGGGGA GGAGGGACGG GAGGGTGTCG  CGGAAGCAGG AGGCGCTCGA CCAGATCCCG GCCCCCACCA TGAACTTCAC CGCGCTCCTC GCGTCGTTCC GGAGCAAAGG GCTCGAGCTC CCCGACCTCG TCTGGCTGTC AGGCGCGCAC  ACGATCGGCA TCGCGCACTG CGACTCCTTC GGCGAGCGGC TCTACAACTT CACGGGCCGC GGCGGCGCCG GCGACGCGGA CCCGTCGCTG GACACCGCCT ACGCCGCGAC CCTCCGCCGC  ACAAAGTGCG CGACGCCGAC GGACAACACG ACGATCGTGG AGATGGACCC GGGAAGCTTC CTGACCTTCG ACCTGGGCTA CTACCGGGGC CTCCTCAAGC GCCGGGGCCT GTTCCAGTCG  GACGCGGCCC TGATCACGGA CGCCGCGGCA AGGGCCGACG TCGAGAGCGT GGCCAAAGGG CCCCCCGAGG TGTTCTTCCA GGTGTTCGCG AGGTCCATGG TGAGGCTGGG CATGGTGGGC  GTCAAGACCG GCGCCCAGGG GGAGATCCGG CGCCACTGCG CCGTCGTCAA CGGCTAGTCT GTAAACTCTG TATATATATG TATGTATGGC CACGATGATC CGTGGGTTTT TGTGGGTGGT 
TTTATGTTTC TATTGGTCCA ACTGTAACTA GGAAAATGGT GCAATAAACT T 

Retrieve as FASTA