1. Browse the Database
  2. View Redoxidase
Entry information : BdiPrx96 (Bradi3g09080)
Entry ID 7915
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx96 (Bradi3g09080)
Name (synonym) BdiPrx96 (Bradi3g09080)
Class Class III peroxidase    [Orthogroup: Prx138]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx96
start..stop		 S start..stop
TaPrx81-1B 529 0 18..322 21..325
TaPrx81-1D 528 0 18..322 21..325
TaPrx81-1A 528 0 18..322 21..325
SofPrx08 478 1.65e-171 20..322 22..324
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7186250..7186468 217 N° 2 7186579..7186770 190 N° 3 7187100..7187657 556  
join(7186250..7186468,7186579..7186770,7187100..7187657)


exon

Literature and cross-references BdiPrx96 (Bradi3g09080)
DNA ref. Phytozome 12:   Bd3 (7186250..7187657)
EST ref. GenBank:   DV481478.1 [Fragment]  DV483889.1 [Fragment]
Protein sequence: BdiPrx96 (Bradi3g09080)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (296)
PWM (Da):   %s   33396.81 (30879.3) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.4 (7.98) Peptide Signal:   %s   cut: 27 range:27-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAMRRVLVAAVALATASLLVPAAVAQLSPSFYGASCTSLESIVR
SGMVSAVQSEPRMGASILRLFFHDCFVNGCDASVLLDDSSTLTGEKNAGPNANSLRGYEVIDAIKSRVEAACPGTVSCADILAVAARDGVNLLGGPTWAVPLGRRDARTTTQQAANANLPSPSSAIGTLISSFASKGLDSQDLVALSG
GHTIGAARCASFRSRVYNDSNILAGFAQRRRQVCPAQGPNGDGNLAPLDAFSSVKFDNGYFRNLQGRFGLLHSDQELFNGGPVDSIVQRYARDGGAFAGDFVNAMIKMGNISPLTGANGE
IRANCRKPN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, intron 1 & 2), 2 ESTs. Cultivar="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCGATGAGGAGAGTGTTGGTGGCCGCAGTAGCGCTGGCCACGGCCTCGCTGCTCGTCCCCGCCGCCGTGGCTCAGCTCTCGCCGTCGTTCTACGGCGCCAGCTGCACGAGCCTG
GAGTCCATCGTGCGGTCGGGGATGGTTTCCGCTGTCCAGAGCGAGCCCCGGATGGGCGCCTCCATACTCCGCCTCTTCTTCCACGACTGCTTCGTCAACACGTACGCACATACATACTCT
CTGCTCCCTCGATCAAAAACTCTTCCTTGCTACTCTGCTCTGTAGTCTGTACTCATTGGAATGGCCTGGGGGCATCCATCGATTTTGGCAGGGCTGCGACGCGTCGGTGCTGCTGGACGA
CTCGTCGACGCTGACGGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCTGCGCGGCTACGAGGTGATCGACGCCATCAAGTCCCGGGTCGAGGCAGCCTGCCCCGGCACCGTCTCCTG
CGCCGACATCCTCGCCGTCGCCGCCCGCGACGGCGTCAACCTGTGGTGAGTGTCAGCGCGAGCGCGAACTTATTACCGTGCATCATTGCCCCCACCAGTCAAAATACATATGGATTTACC
GTACGTCATCCTGCCGACACCCAGTACAACGAACTCGCTGTCCGAAAAAAAAAAGGTTTGCTCCATTTCTAACAACCGCGCATGCACGCGCGACAAATTAGTCCGCACACGTTCTCTGAC
ACGTGGGCCGGGTTTCTTTCCGCAACCGCCTGCACTTTCTCTGGTGGATCTCATTCTCATGAGAATGGCACCGCTGCTGGCTGTGTCTATCAATTTGTTCACATGACAACGATGACGACG
TTGTAATAATGCAGCTAGGTGGGCCGACTTGGGCGGTGCCGCTGGGCCGGCGCGACGCGCGGACGACGACGCAGCAGGCCGCGAACGCCAACCTACCCTCGCCGTCATCGGCAATCGGCA
CGCTCATCTCGTCGTTCGCGTCCAAGGGGCTCGACAGCCAGGACCTGGTGGCGCTGTCGGGCGGGCACACGATCGGCGCGGCCCGGTGCGCGAGCTTCCGTTCCCGCGTGTACAACGACA
GCAACATCCTGGCCGGGTTCGCGCAGCGGCGGCGGCAGGTGTGCCCGGCCCAGGGGCCCAACGGCGACGGCAACCTGGCCCCGCTGGACGCCTTCAGCTCCGTCAAGTTCGACAACGGCT
ACTTCCGCAACCTGCAGGGCCGCTTCGGCCTGCTCCACTCCGACCAGGAGCTCTTCAACGGCGGGCCCGTCGACTCCATCGTGCAGCGGTACGCGCGCGACGGGGGCGCCTTCGCGGGCG
ACTTCGTCAACGCCATGATCAAGATGGGCAACATCAGCCCGCTCACGGGAGCCAACGGCGAGATCCGGGCCAACTGCAGGAAACCCAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCGATGAGGAGAGTGTTGGTGGCCGCAGTAGCGCTGGCCACGGCCTCGCTGCTCGTCCCCGCCGCCGTGGCTCAGCTCTCGCCGTCGTTCTACGGCGCCAGCTGCACGAGCCTG
GAGTCCATCGTGCGGTCGGGGATGGTTTCCGCTGTCCAGAGCGAGCCCCGGATGGGCGCCTCCATACTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGGCTGCGACGCGTCGGTGCTG
CTGGACGACTCGTCGACGCTGACGGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCTGCGCGGCTACGAGGTGATCGACGCCATCAAGTCCCGGGTCGAGGCAGCCTGCCCCGGCACC
GTCTCCTGCGCCGACATCCTCGCCGTCGCCGCCCGCGACGGCGTCAACCTGCTAGGTGGGCCGACTTGGGCGGTGCCGCTGGGCCGGCGCGACGCGCGGACGACGACGCAGCAGGCCGCG
AACGCCAACCTACCCTCGCCGTCATCGGCAATCGGCACGCTCATCTCGTCGTTCGCGTCCAAGGGGCTCGACAGCCAGGACCTGGTGGCGCTGTCGGGCGGGCACACGATCGGCGCGGCC
CGGTGCGCGAGCTTCCGTTCCCGCGTGTACAACGACAGCAACATCCTGGCCGGGTTCGCGCAGCGGCGGCGGCAGGTGTGCCCGGCCCAGGGGCCCAACGGCGACGGCAACCTGGCCCCG
CTGGACGCCTTCAGCTCCGTCAAGTTCGACAACGGCTACTTCCGCAACCTGCAGGGCCGCTTCGGCCTGCTCCACTCCGACCAGGAGCTCTTCAACGGCGGGCCCGTCGACTCCATCGTG
CAGCGGTACGCGCGCGACGGGGGCGCCTTCGCGGGCGACTTCGTCAACGCCATGATCAAGATGGGCAACATCAGCCCGCTCACGGGAGCCAACGGCGAGATCCGGGCCAACTGCAGGAAA
CCCAACTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAGGCAGGGG CCTGGCCGGA GCTCTCGCTA TACTGCCATT AGCCAGTAAG AGCTTGCAAT GGCAGCGATG AGGAGAGTGT TGGTGGCCGC AGTAGCGCTG GCCACGGCCT CGCTGCTCGT  CCCCGCCGCC GTGGCTCAGC TCTCGCCGTC GTTCTACGGC GCCAGCTGCA CGAGCCTGGA GTCCATCGTG CGGTCGGGGA TGGTTTCCGC TGTCCAGAGC GAGCCCCGGA TGGGCGCCTC  CATACTCCGC CTCTTCTTCC ACGACTGCTT CGTCAACGGC TGCGACGCGT CGGTGCTGCT GGACGACTCG TCGACGCTGA CGGGGGAGAA GAACGCCGGG CCGAACGCCA ACTCGCTGCG  CGGCTACGAG GTGATCGACG CCATCAAGTC CCGGGTCGAG GCAGCCTGCC CCGGCACCGT CTCCTGCGCC GACATCCTCG CCGTCGCCGC CCGCGACGGC GTCAACCTGC TAGGTGGGCC  GACTTGGGCG GTGCCGCTGG GCCGGCGCGA CGCGCGGACG ACGACGCAGC AGGCCGCGAA CGCCAACCTA CCCTCGCCGT CATCGGCAAT CGGCACGCTC ATCTCGTCGT TCGCGTCCAA  GGGGCTCGAC AGCCAGGACC TGGTGGCGCT GTCGGGCGGG CACACGATCG GCGCGGCCCG GTGCGCGAGC TTCCGTTCCC GCGTGTACAA CGACAGCAAC ATCCTGGCCG GGTTCGCGCA  GCGGCGGCGG CAGGTGTGCC CGGCCCAGGG GCCCAACGGC GACGGCAACC TGGCCCCGCT GGACGCCTTC AGCTCCGTCA AGTTCGACAA CGGCTACTTC CGCAACCTGC AGGGCCGCTT  CGGCCTGCTC CACTCCGACC AGGAGCTCTT CAACGGCGGG CCCGTCGACT CCATCGTGCA GCGGTACGCG CGCGACGGGG GCGCCTTCGC GGGCGACTTC GTCAACGCCA TGATCAAGAT  GGGCAACATC AGCCCGCTCA CGGGAGCCAA CGGCGAGATC CGGGCCAACT GCAGGAAACC CAACTAAAGG ACGGACACAC CGATGGCATC GAGATTCATG GTCGGGACGT CGGGTCGCTT  GACATCGCCA GCTAGTAATT AAGATGGAAC ATTTTGCGAG ATGCGTGGCT TTTTTCTCTG GTGTGGCTGG CGCGAGACGG TGGAGTGCGT GTGAAGGCAA GGGTTGTGAC GAAATAATTA  GGTGGAGTGG CGCTGTCAAG TTGAGGAGAA GGGGGCTAGC TAGCTCGTGC GTGCATGCAT GCATTGTCGC GGCCGGCGAC ACGTACATCA CGGGCGGCAC CGCACCACCT ATTGGCATCG  GCATTTGCTT CGTTGATTAT TTGGTTGCAT TCTTTTTTTG TACCATATGA TGATGGTTAT AGTTTCAGAT GAACGATGAT TGTTTTGCAA GGGAACACAT GAATAATAAA CGCACTGTAT 
GTCCAT 

Retrieve as FASTA